EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020012262 (Gene tree)
Gene ID: -
Gene Symbol: edc3
Alias: -
Full Name: enhancer of mRNA decapping 3 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 6048 bases
Position: chr6:12606998-12613045
Accession: ZDB-GENE-050522-287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020028659	FDF	PF09532.10	6.5e-11	1	1
ENSORLP00020011324	FDF	PF09532.10	6.8e-11	1	1
ENSORLP00020028659	LSM14	PF12701.7	2.4e-10	1	1
ENSORLP00020011324	LSM14	PF12701.7	2.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020018187	-	3975	-	ENSORLP00020011324	490 (aa)	-	-
ENSORLT00020031729	-	3745	-	ENSORLP00020028659	479 (aa)	-	-

Gene Model

Click here to download ENSORLG00020012262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020012262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020012262	edc3	100	62.940	ENSORLG00020019446	-	100	62.940

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020012262	edc3	100	67.583	ENSG00000179151	EDC3	100	78.049	Homo_sapiens
ENSORLG00020012262	edc3	100	88.309	ENSAPOG00000010791	edc3	100	88.309	Acanthochromis_polyacanthus
ENSORLG00020012262	edc3	100	58.586	ENSAPOG00000008655	EDC3	100	58.586	Acanthochromis_polyacanthus
ENSORLG00020012262	edc3	100	67.387	ENSAMEG00000008963	EDC3	100	67.387	Ailuropoda_melanoleuca
ENSORLG00020012262	edc3	99	63.817	ENSACIG00000005330	EDC3	99	64.128	Amphilophus_citrinellus
ENSORLG00020012262	edc3	100	87.474	ENSACIG00000017751	edc3	100	87.474	Amphilophus_citrinellus
ENSORLG00020012262	edc3	100	88.727	ENSAOCG00000005431	edc3	100	88.727	Amphiprion_ocellaris
ENSORLG00020012262	edc3	100	64.876	ENSAOCG00000009103	-	100	64.876	Amphiprion_ocellaris
ENSORLG00020012262	edc3	100	88.727	ENSAPEG00000000968	edc3	100	88.727	Amphiprion_percula
ENSORLG00020012262	edc3	100	65.083	ENSAPEG00000007841	EDC3	100	65.083	Amphiprion_percula
ENSORLG00020012262	edc3	100	65.567	ENSATEG00000004205	-	100	65.567	Anabas_testudineus
ENSORLG00020012262	edc3	100	89.144	ENSATEG00000015505	edc3	100	89.144	Anabas_testudineus
ENSORLG00020012262	edc3	89	66.960	ENSAPLG00000008957	EDC3	100	66.960	Anas_platyrhynchos
ENSORLG00020012262	edc3	77	65.657	ENSACAG00000000460	-	100	65.657	Anolis_carolinensis
ENSORLG00020012262	edc3	100	67.780	ENSANAG00000024078	EDC3	100	67.780	Aotus_nancymaae
ENSORLG00020012262	edc3	100	87.474	ENSACLG00000007232	edc3	100	87.474	Astatotilapia_calliptera
ENSORLG00020012262	edc3	100	63.975	ENSACLG00000018776	-	100	63.975	Astatotilapia_calliptera
ENSORLG00020012262	edc3	100	77.579	ENSAMXG00000001589	edc3	100	77.579	Astyanax_mexicanus
ENSORLG00020012262	edc3	100	67.191	ENSBTAG00000007308	EDC3	100	67.191	Bos_taurus
ENSORLG00020012262	edc3	100	67.780	ENSCJAG00000017681	EDC3	100	67.780	Callithrix_jacchus
ENSORLG00020012262	edc3	100	66.994	ENSCAFG00000017935	EDC3	100	66.994	Canis_familiaris
ENSORLG00020012262	edc3	100	66.994	ENSCAFG00020003909	EDC3	100	66.994	Canis_lupus_dingo
ENSORLG00020012262	edc3	100	67.387	ENSCHIG00000023658	EDC3	100	67.387	Capra_hircus
ENSORLG00020012262	edc3	100	67.780	ENSTSYG00000004822	EDC3	100	67.780	Carlito_syrichta
ENSORLG00020012262	edc3	100	67.780	ENSCPOG00000015595	EDC3	100	67.780	Cavia_porcellus
ENSORLG00020012262	edc3	100	67.583	ENSCCAG00000021663	EDC3	100	67.583	Cebus_capucinus
ENSORLG00020012262	edc3	100	67.387	ENSCATG00000037511	EDC3	100	67.387	Cercocebus_atys
ENSORLG00020012262	edc3	100	67.583	ENSCLAG00000005700	EDC3	100	67.583	Chinchilla_lanigera
ENSORLG00020012262	edc3	100	67.387	ENSCSAG00000014239	EDC3	100	67.387	Chlorocebus_sabaeus
ENSORLG00020012262	edc3	100	68.555	ENSCPBG00000024239	EDC3	100	68.555	Chrysemys_picta_bellii
ENSORLG00020012262	edc3	100	37.721	ENSCING00000022142	-	99	37.721	Ciona_intestinalis
ENSORLG00020012262	edc3	100	67.387	ENSCANG00000028699	EDC3	100	67.387	Colobus_angolensis_palliatus
ENSORLG00020012262	edc3	100	67.191	ENSCGRG00001013874	Edc3	100	67.969	Cricetulus_griseus_chok1gshd
ENSORLG00020012262	edc3	100	67.191	ENSCGRG00000011885	Edc3	100	67.969	Cricetulus_griseus_crigri
ENSORLG00020012262	edc3	99	86.402	ENSCSEG00000012996	edc3	99	86.402	Cynoglossus_semilaevis
ENSORLG00020012262	edc3	100	87.891	ENSCVAG00000008023	edc3	100	87.891	Cyprinodon_variegatus
ENSORLG00020012262	edc3	99	74.851	ENSDARG00000051931	edc3	99	74.851	Danio_rerio
ENSORLG00020012262	edc3	100	59.231	ENSDNOG00000030661	EDC3	100	59.231	Dasypus_novemcinctus
ENSORLG00020012262	edc3	68	77.778	ENSETEG00000002398	-	64	77.778	Echinops_telfairi
ENSORLG00020012262	edc3	100	67.387	ENSEASG00005005071	EDC3	100	67.387	Equus_asinus_asinus
ENSORLG00020012262	edc3	100	67.387	ENSECAG00000017994	EDC3	100	67.387	Equus_caballus
ENSORLG00020012262	edc3	100	70.062	ENSELUG00000007607	EDC3	100	70.062	Esox_lucius
ENSORLG00020012262	edc3	100	79.588	ENSELUG00000005794	edc3	100	79.588	Esox_lucius
ENSORLG00020012262	edc3	100	67.191	ENSFCAG00000002014	EDC3	100	67.191	Felis_catus
ENSORLG00020012262	edc3	98	66.466	ENSFALG00000004543	EDC3	96	66.466	Ficedula_albicollis
ENSORLG00020012262	edc3	100	67.583	ENSFDAG00000012582	EDC3	100	67.583	Fukomys_damarensis
ENSORLG00020012262	edc3	100	89.144	ENSFHEG00000009375	edc3	100	89.144	Fundulus_heteroclitus
ENSORLG00020012262	edc3	100	84.025	ENSGMOG00000002715	edc3	100	84.025	Gadus_morhua
ENSORLG00020012262	edc3	100	68.047	ENSGALG00000040181	EDC3	100	68.047	Gallus_gallus
ENSORLG00020012262	edc3	100	86.848	ENSGAFG00000014433	edc3	100	86.848	Gambusia_affinis
ENSORLG00020012262	edc3	99	60.470	ENSGACG00000014671	EDC3	99	61.057	Gasterosteus_aculeatus
ENSORLG00020012262	edc3	100	86.430	ENSGACG00000009783	edc3	100	86.430	Gasterosteus_aculeatus
ENSORLG00020012262	edc3	100	69.231	ENSGAGG00000023477	EDC3	100	69.231	Gopherus_agassizii
ENSORLG00020012262	edc3	100	67.583	ENSGGOG00000003552	EDC3	100	67.583	Gorilla_gorilla
ENSORLG00020012262	edc3	100	64.182	ENSHBUG00000020817	EDC3	100	64.182	Haplochromis_burtoni
ENSORLG00020012262	edc3	100	87.474	ENSHBUG00000003635	edc3	100	87.474	Haplochromis_burtoni
ENSORLG00020012262	edc3	100	85.447	ENSHCOG00000016834	edc3	100	85.447	Hippocampus_comes
ENSORLG00020012262	edc3	99	77.108	ENSIPUG00000005695	edc3	100	77.108	Ictalurus_punctatus
ENSORLG00020012262	edc3	100	67.583	ENSSTOG00000013936	EDC3	100	67.583	Ictidomys_tridecemlineatus
ENSORLG00020012262	edc3	100	67.387	ENSJJAG00000008074	Edc3	100	67.387	Jaculus_jaculus
ENSORLG00020012262	edc3	100	88.518	ENSKMAG00000001243	edc3	100	88.518	Kryptolebias_marmoratus
ENSORLG00020012262	edc3	100	62.526	ENSKMAG00000001987	EDC3	100	62.526	Kryptolebias_marmoratus
ENSORLG00020012262	edc3	100	63.895	ENSLBEG00000017984	EDC3	100	63.895	Labrus_bergylta
ENSORLG00020012262	edc3	100	87.265	ENSLBEG00000013435	edc3	99	87.265	Labrus_bergylta
ENSORLG00020012262	edc3	100	69.844	ENSLACG00000014149	EDC3	100	69.844	Latimeria_chalumnae
ENSORLG00020012262	edc3	99	72.065	ENSLOCG00000014625	edc3	99	72.065	Lepisosteus_oculatus
ENSORLG00020012262	edc3	100	67.913	ENSLAFG00000002992	EDC3	100	67.913	Loxodonta_africana
ENSORLG00020012262	edc3	100	67.583	ENSMFAG00000043074	EDC3	100	67.583	Macaca_fascicularis
ENSORLG00020012262	edc3	100	67.583	ENSMMUG00000011071	EDC3	100	67.583	Macaca_mulatta
ENSORLG00020012262	edc3	100	67.583	ENSMNEG00000035316	EDC3	100	67.583	Macaca_nemestrina
ENSORLG00020012262	edc3	100	67.387	ENSMLEG00000030372	EDC3	100	67.387	Mandrillus_leucophaeus
ENSORLG00020012262	edc3	99	63.900	ENSMAMG00000005423	-	99	63.900	Mastacembelus_armatus
ENSORLG00020012262	edc3	100	87.891	ENSMAMG00000000505	edc3	100	87.891	Mastacembelus_armatus
ENSORLG00020012262	edc3	100	87.265	ENSMZEG00005004892	edc3	100	87.265	Maylandia_zebra
ENSORLG00020012262	edc3	100	64.139	ENSMZEG00005005654	EDC3	100	64.139	Maylandia_zebra
ENSORLG00020012262	edc3	100	68.047	ENSMGAG00000002617	EDC3	100	68.047	Meleagris_gallopavo
ENSORLG00020012262	edc3	100	67.976	ENSMICG00000043190	EDC3	100	67.976	Microcebus_murinus
ENSORLG00020012262	edc3	100	67.387	ENSMOCG00000016205	Edc3	100	67.387	Microtus_ochrogaster
ENSORLG00020012262	edc3	99	88.494	ENSMMOG00000012278	edc3	99	88.494	Mola_mola
ENSORLG00020012262	edc3	100	67.969	ENSMODG00000009442	EDC3	100	67.969	Monodelphis_domestica
ENSORLG00020012262	edc3	100	87.891	ENSMALG00000008658	edc3	100	87.891	Monopterus_albus
ENSORLG00020012262	edc3	100	67.583	MGP_CAROLIEiJ_G0032280	Edc3	100	76.923	Mus_caroli
ENSORLG00020012262	edc3	100	67.583	ENSMUSG00000038957	Edc3	100	76.923	Mus_musculus
ENSORLG00020012262	edc3	100	67.583	MGP_PahariEiJ_G0015146	Edc3	100	76.923	Mus_pahari
ENSORLG00020012262	edc3	100	67.583	MGP_SPRETEiJ_G0033420	Edc3	100	76.923	Mus_spretus
ENSORLG00020012262	edc3	100	67.191	ENSMPUG00000017293	EDC3	100	67.191	Mustela_putorius_furo
ENSORLG00020012262	edc3	100	67.515	ENSMLUG00000016382	EDC3	100	67.515	Myotis_lucifugus
ENSORLG00020012262	edc3	100	67.387	ENSNGAG00000010923	Edc3	100	67.387	Nannospalax_galili
ENSORLG00020012262	edc3	100	64.669	ENSNBRG00000007881	EDC3	100	64.669	Neolamprologus_brichardi
ENSORLG00020012262	edc3	100	87.265	ENSNBRG00000002434	edc3	100	87.265	Neolamprologus_brichardi
ENSORLG00020012262	edc3	100	57.760	ENSNLEG00000014577	EDC3	100	57.760	Nomascus_leucogenys
ENSORLG00020012262	edc3	100	67.850	ENSMEUG00000009077	EDC3	100	67.850	Notamacropus_eugenii
ENSORLG00020012262	edc3	84	77.778	ENSOPRG00000009540	-	79	77.778	Ochotona_princeps
ENSORLG00020012262	edc3	100	60.542	ENSONIG00000002932	-	100	60.542	Oreochromis_niloticus
ENSORLG00020012262	edc3	100	87.683	ENSONIG00000008434	edc3	100	87.683	Oreochromis_niloticus
ENSORLG00020012262	edc3	77	65.000	ENSOCUG00000017740	EDC3	86	65.000	Oryctolagus_cuniculus
ENSORLG00020012262	edc3	100	99.165	ENSORLG00000004883	edc3	100	99.165	Oryzias_latipes
ENSORLG00020012262	edc3	100	62.940	ENSORLG00000014399	-	98	62.940	Oryzias_latipes
ENSORLG00020012262	edc3	100	62.940	ENSORLG00015017635	-	96	62.940	Oryzias_latipes_hsok
ENSORLG00020012262	edc3	100	99.582	ENSORLG00015005634	edc3	100	99.582	Oryzias_latipes_hsok
ENSORLG00020012262	edc3	100	63.843	ENSOMEG00000017354	EDC3	100	63.843	Oryzias_melastigma
ENSORLG00020012262	edc3	100	96.451	ENSOMEG00000014026	edc3	100	96.451	Oryzias_melastigma
ENSORLG00020012262	edc3	100	67.976	ENSOGAG00000014441	EDC3	100	67.976	Otolemur_garnettii
ENSORLG00020012262	edc3	100	66.667	ENSOARG00000003476	EDC3	100	67.059	Ovis_aries
ENSORLG00020012262	edc3	100	67.583	ENSPPAG00000040143	EDC3	100	67.583	Pan_paniscus
ENSORLG00020012262	edc3	100	67.191	ENSPPRG00000006257	EDC3	100	67.191	Panthera_pardus
ENSORLG00020012262	edc3	100	67.191	ENSPTIG00000017424	EDC3	100	67.191	Panthera_tigris_altaica
ENSORLG00020012262	edc3	100	67.583	ENSPTRG00000007279	EDC3	100	67.583	Pan_troglodytes
ENSORLG00020012262	edc3	100	67.387	ENSPANG00000015997	EDC3	100	67.387	Papio_anubis
ENSORLG00020012262	edc3	100	72.525	ENSPKIG00000019810	EDC3	100	72.525	Paramormyrops_kingsleyae
ENSORLG00020012262	edc3	100	73.518	ENSPKIG00000004416	edc3	100	73.518	Paramormyrops_kingsleyae
ENSORLG00020012262	edc3	100	64.258	ENSPSIG00000008474	EDC3	100	65.234	Pelodiscus_sinensis
ENSORLG00020012262	edc3	100	85.447	ENSPMGG00000007223	edc3	100	85.447	Periophthalmus_magnuspinnatus
ENSORLG00020012262	edc3	100	67.780	ENSPEMG00000015260	Edc3	100	67.780	Peromyscus_maniculatus_bairdii
ENSORLG00020012262	edc3	100	67.850	ENSPCIG00000006276	EDC3	70	67.984	Phascolarctos_cinereus
ENSORLG00020012262	edc3	100	88.100	ENSPFOG00000012204	edc3	100	88.100	Poecilia_formosa
ENSORLG00020012262	edc3	100	88.100	ENSPLAG00000014420	edc3	100	88.100	Poecilia_latipinna
ENSORLG00020012262	edc3	100	88.100	ENSPMEG00000023289	edc3	100	88.100	Poecilia_mexicana
ENSORLG00020012262	edc3	100	87.891	ENSPREG00000016022	edc3	100	87.891	Poecilia_reticulata
ENSORLG00020012262	edc3	100	66.405	ENSPPYG00000006642	EDC3	100	66.405	Pongo_abelii
ENSORLG00020012262	edc3	93	77.778	ENSPCAG00000002802	EDC3	88	77.778	Procavia_capensis
ENSORLG00020012262	edc3	100	67.583	ENSPCOG00000013364	EDC3	100	67.583	Propithecus_coquereli
ENSORLG00020012262	edc3	100	67.780	ENSPVAG00000014733	EDC3	100	67.780	Pteropus_vampyrus
ENSORLG00020012262	edc3	100	87.474	ENSPNYG00000021797	edc3	100	87.474	Pundamilia_nyererei
ENSORLG00020012262	edc3	100	64.182	ENSPNYG00000009669	EDC3	100	64.182	Pundamilia_nyererei
ENSORLG00020012262	edc3	100	78.175	ENSPNAG00000019657	edc3	100	78.175	Pygocentrus_nattereri
ENSORLG00020012262	edc3	99	67.589	ENSRNOG00000019579	Edc3	99	67.589	Rattus_norvegicus
ENSORLG00020012262	edc3	100	67.510	ENSRBIG00000019488	EDC3	100	67.510	Rhinopithecus_bieti
ENSORLG00020012262	edc3	100	67.510	ENSRROG00000034959	EDC3	100	67.510	Rhinopithecus_roxellana
ENSORLG00020012262	edc3	100	67.583	ENSSBOG00000004896	EDC3	100	67.583	Saimiri_boliviensis_boliviensis
ENSORLG00020012262	edc3	96	67.623	ENSSHAG00000015075	EDC3	95	67.623	Sarcophilus_harrisii
ENSORLG00020012262	edc3	100	76.938	ENSSFOG00015016939	edc3	100	76.938	Scleropages_formosus
ENSORLG00020012262	edc3	100	71.281	ENSSFOG00015002439	edc3	100	71.340	Scleropages_formosus
ENSORLG00020012262	edc3	100	87.683	ENSSMAG00000010695	edc3	100	87.683	Scophthalmus_maximus
ENSORLG00020012262	edc3	99	65.560	ENSSMAG00000010176	-	99	65.560	Scophthalmus_maximus
ENSORLG00020012262	edc3	100	89.562	ENSSDUG00000021844	edc3	100	89.562	Seriola_dumerili
ENSORLG00020012262	edc3	100	67.355	ENSSDUG00000007671	EDC3	100	67.355	Seriola_dumerili
ENSORLG00020012262	edc3	100	89.353	ENSSLDG00000022046	edc3	100	89.353	Seriola_lalandi_dorsalis
ENSORLG00020012262	edc3	79	79.839	ENSSARG00000003907	EDC3	80	79.839	Sorex_araneus
ENSORLG00020012262	edc3	100	66.798	ENSSPUG00000008232	EDC3	100	66.798	Sphenodon_punctatus
ENSORLG00020012262	edc3	100	64.463	ENSSPAG00000020327	EDC3	100	64.876	Stegastes_partitus
ENSORLG00020012262	edc3	100	88.518	ENSSPAG00000010009	edc3	100	88.518	Stegastes_partitus
ENSORLG00020012262	edc3	100	70.417	ENSSSCG00000001903	EDC3	100	70.417	Sus_scrofa
ENSORLG00020012262	edc3	100	67.850	ENSTGUG00000004007	EDC3	100	67.850	Taeniopygia_guttata
ENSORLG00020012262	edc3	100	85.804	ENSTRUG00000017078	edc3	100	85.804	Takifugu_rubripes
ENSORLG00020012262	edc3	100	85.655	ENSTNIG00000016047	edc3	100	85.655	Tetraodon_nigroviridis
ENSORLG00020012262	edc3	100	67.913	ENSTTRG00000007990	EDC3	100	67.913	Tursiops_truncatus
ENSORLG00020012262	edc3	100	67.387	ENSUAMG00000026710	-	100	67.387	Ursus_americanus
ENSORLG00020012262	edc3	100	67.387	ENSUMAG00000005006	EDC3	96	67.387	Ursus_maritimus
ENSORLG00020012262	edc3	84	68.519	ENSVPAG00000003499	-	79	68.519	Vicugna_pacos
ENSORLG00020012262	edc3	100	67.191	ENSVVUG00000018601	EDC3	100	67.191	Vulpes_vulpes
ENSORLG00020012262	edc3	72	73.639	ENSXETG00000010622	edc3	99	75.072	Xenopus_tropicalis
ENSORLG00020012262	edc3	100	87.683	ENSXMAG00000007377	edc3	100	87.683	Xiphophorus_maculatus