EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020012386 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-11k18.4
Alias: -
Full Name: uncharacterized LOC101160240
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 6323 bases
Position: chr8:14466548-14472870
Accession: 101160240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020028747	MMR_HSR1	PF01926.23	4.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020031783	-	1976	XM_023957673	ENSORLP00020028747	451 (aa)	XP_023813441	-

Gene Model

Click here to download ENSORLG00020012386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020012386's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020012386	si:ch211-11k18.4	99	59.556	ENSORLG00020013350	si:dkey-98f17.5	100	59.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020012386	si:ch211-11k18.4	99	60.667	ENSAPOG00000010378	si:dkey-98f17.5	100	60.667	Acanthochromis_polyacanthus
ENSORLG00020012386	si:ch211-11k18.4	100	88.248	ENSAPOG00000018833	si:ch211-11k18.4	100	88.248	Acanthochromis_polyacanthus
ENSORLG00020012386	si:ch211-11k18.4	99	85.111	ENSACIG00000006696	si:ch211-11k18.4	99	85.111	Amphilophus_citrinellus
ENSORLG00020012386	si:ch211-11k18.4	99	60.000	ENSACIG00000017719	si:dkey-98f17.5	100	60.000	Amphilophus_citrinellus
ENSORLG00020012386	si:ch211-11k18.4	100	88.470	ENSAOCG00000014284	si:ch211-11k18.4	100	88.470	Amphiprion_ocellaris
ENSORLG00020012386	si:ch211-11k18.4	99	60.889	ENSAOCG00000008661	si:dkey-98f17.5	100	60.889	Amphiprion_ocellaris
ENSORLG00020012386	si:ch211-11k18.4	99	60.889	ENSAPEG00000022447	si:dkey-98f17.5	100	60.889	Amphiprion_percula
ENSORLG00020012386	si:ch211-11k18.4	100	88.248	ENSAPEG00000014910	si:ch211-11k18.4	100	88.248	Amphiprion_percula
ENSORLG00020012386	si:ch211-11k18.4	100	86.475	ENSATEG00000004775	si:ch211-11k18.4	100	86.475	Anabas_testudineus
ENSORLG00020012386	si:ch211-11k18.4	99	60.000	ENSATEG00000007188	si:dkey-98f17.5	100	60.222	Anabas_testudineus
ENSORLG00020012386	si:ch211-11k18.4	98	64.719	ENSACAG00000028632	-	98	64.719	Anolis_carolinensis
ENSORLG00020012386	si:ch211-11k18.4	99	60.444	ENSACLG00000001308	si:dkey-98f17.5	100	60.444	Astatotilapia_calliptera
ENSORLG00020012386	si:ch211-11k18.4	100	87.140	ENSACLG00000007907	si:ch211-11k18.4	100	87.140	Astatotilapia_calliptera
ENSORLG00020012386	si:ch211-11k18.4	99	59.333	ENSAMXG00000001190	si:dkey-98f17.5	100	59.333	Astyanax_mexicanus
ENSORLG00020012386	si:ch211-11k18.4	99	81.778	ENSAMXG00000017817	si:ch211-11k18.4	100	81.778	Astyanax_mexicanus
ENSORLG00020012386	si:ch211-11k18.4	82	62.366	ENSCING00000020807	-	98	62.366	Ciona_intestinalis
ENSORLG00020012386	si:ch211-11k18.4	99	60.000	ENSCSAVG00000009987	-	100	60.000	Ciona_savignyi
ENSORLG00020012386	si:ch211-11k18.4	100	82.262	ENSCSEG00000017661	si:ch211-11k18.4	100	82.262	Cynoglossus_semilaevis
ENSORLG00020012386	si:ch211-11k18.4	98	60.000	ENSCSEG00000017512	si:dkey-98f17.5	98	59.670	Cynoglossus_semilaevis
ENSORLG00020012386	si:ch211-11k18.4	100	87.805	ENSCVAG00000015346	si:ch211-11k18.4	100	87.805	Cyprinodon_variegatus
ENSORLG00020012386	si:ch211-11k18.4	99	60.000	ENSCVAG00000011351	si:dkey-98f17.5	100	60.000	Cyprinodon_variegatus
ENSORLG00020012386	si:ch211-11k18.4	99	79.556	ENSDARG00000087869	si:ch211-11k18.4	100	86.735	Danio_rerio
ENSORLG00020012386	si:ch211-11k18.4	98	60.544	ENSDARG00000068863	si:dkey-98f17.5	100	60.544	Danio_rerio
ENSORLG00020012386	si:ch211-11k18.4	80	59.669	ENSEBUG00000007620	si:dkey-98f17.5	97	59.669	Eptatretus_burgeri
ENSORLG00020012386	si:ch211-11k18.4	99	59.645	ENSELUG00000003365	si:dkey-98f17.5	100	59.645	Esox_lucius
ENSORLG00020012386	si:ch211-11k18.4	100	86.253	ENSFHEG00000019820	si:ch211-11k18.4	100	86.253	Fundulus_heteroclitus
ENSORLG00020012386	si:ch211-11k18.4	99	59.111	ENSFHEG00000012744	si:dkey-98f17.5	100	59.111	Fundulus_heteroclitus
ENSORLG00020012386	si:ch211-11k18.4	90	74.752	ENSGMOG00000003492	si:ch211-11k18.4	100	74.752	Gadus_morhua
ENSORLG00020012386	si:ch211-11k18.4	99	59.556	ENSGAFG00000012362	si:dkey-98f17.5	89	59.556	Gambusia_affinis
ENSORLG00020012386	si:ch211-11k18.4	100	86.918	ENSGAFG00000005677	si:ch211-11k18.4	100	86.918	Gambusia_affinis
ENSORLG00020012386	si:ch211-11k18.4	90	84.653	ENSGACG00000013134	si:ch211-11k18.4	100	84.653	Gasterosteus_aculeatus
ENSORLG00020012386	si:ch211-11k18.4	58	73.846	ENSGACG00000009399	si:dkey-98f17.5	100	73.846	Gasterosteus_aculeatus
ENSORLG00020012386	si:ch211-11k18.4	99	60.667	ENSHBUG00000008331	si:dkey-98f17.5	100	60.667	Haplochromis_burtoni
ENSORLG00020012386	si:ch211-11k18.4	100	87.361	ENSHBUG00000020638	si:ch211-11k18.4	100	87.361	Haplochromis_burtoni
ENSORLG00020012386	si:ch211-11k18.4	99	84.889	ENSHCOG00000014773	si:ch211-11k18.4	100	84.889	Hippocampus_comes
ENSORLG00020012386	si:ch211-11k18.4	99	58.296	ENSHCOG00000016505	si:dkey-98f17.5	98	58.296	Hippocampus_comes
ENSORLG00020012386	si:ch211-11k18.4	99	57.743	ENSIPUG00000019981	si:dkey-98f17.5	100	57.048	Ictalurus_punctatus
ENSORLG00020012386	si:ch211-11k18.4	90	67.822	ENSIPUG00000016694	si:ch211-11k18.4	84	69.531	Ictalurus_punctatus
ENSORLG00020012386	si:ch211-11k18.4	96	76.157	ENSIPUG00000016678	si:ch211-11k18.4	99	76.157	Ictalurus_punctatus
ENSORLG00020012386	si:ch211-11k18.4	99	87.333	ENSKMAG00000009327	si:ch211-11k18.4	99	87.333	Kryptolebias_marmoratus
ENSORLG00020012386	si:ch211-11k18.4	99	59.556	ENSKMAG00000014997	si:dkey-98f17.5	100	59.556	Kryptolebias_marmoratus
ENSORLG00020012386	si:ch211-11k18.4	99	60.222	ENSLBEG00000012756	si:dkey-98f17.5	100	60.222	Labrus_bergylta
ENSORLG00020012386	si:ch211-11k18.4	98	59.775	ENSLACG00000017433	si:dkey-98f17.5	97	59.775	Latimeria_chalumnae
ENSORLG00020012386	si:ch211-11k18.4	99	70.953	ENSLACG00000006280	si:ch211-11k18.4	100	70.953	Latimeria_chalumnae
ENSORLG00020012386	si:ch211-11k18.4	99	61.247	ENSLACG00000004899	-	99	61.247	Latimeria_chalumnae
ENSORLG00020012386	si:ch211-11k18.4	99	59.424	ENSLOCG00000003824	si:dkey-98f17.5	99	59.424	Lepisosteus_oculatus
ENSORLG00020012386	si:ch211-11k18.4	99	59.556	ENSMAMG00000014528	si:dkey-98f17.5	100	59.556	Mastacembelus_armatus
ENSORLG00020012386	si:ch211-11k18.4	96	87.269	ENSMAMG00000002536	si:ch211-11k18.4	99	87.269	Mastacembelus_armatus
ENSORLG00020012386	si:ch211-11k18.4	100	86.918	ENSMZEG00005008941	si:ch211-11k18.4	100	86.918	Maylandia_zebra
ENSORLG00020012386	si:ch211-11k18.4	99	60.667	ENSMZEG00005016572	si:dkey-98f17.5	100	60.667	Maylandia_zebra
ENSORLG00020012386	si:ch211-11k18.4	100	79.823	ENSMMOG00000012485	si:ch211-11k18.4	100	79.823	Mola_mola
ENSORLG00020012386	si:ch211-11k18.4	98	60.909	ENSMALG00000012761	si:dkey-98f17.5	100	60.909	Monopterus_albus
ENSORLG00020012386	si:ch211-11k18.4	100	85.809	ENSMALG00000019735	si:ch211-11k18.4	100	85.809	Monopterus_albus
ENSORLG00020012386	si:ch211-11k18.4	96	87.037	ENSNBRG00000002220	si:ch211-11k18.4	98	87.037	Neolamprologus_brichardi
ENSORLG00020012386	si:ch211-11k18.4	99	60.579	ENSNBRG00000006068	si:dkey-98f17.5	100	60.579	Neolamprologus_brichardi
ENSORLG00020012386	si:ch211-11k18.4	100	86.253	ENSONIG00000019412	si:ch211-11k18.4	100	86.253	Oreochromis_niloticus
ENSORLG00020012386	si:ch211-11k18.4	99	60.889	ENSONIG00000013568	si:dkey-98f17.5	100	60.889	Oreochromis_niloticus
ENSORLG00020012386	si:ch211-11k18.4	99	57.556	ENSORLG00000007958	si:dkey-98f17.5	100	57.778	Oryzias_latipes
ENSORLG00020012386	si:ch211-11k18.4	100	99.557	ENSORLG00000012015	si:ch211-11k18.4	100	99.557	Oryzias_latipes
ENSORLG00020012386	si:ch211-11k18.4	99	59.556	ENSORLG00015002000	si:dkey-98f17.5	100	59.778	Oryzias_latipes_hsok
ENSORLG00020012386	si:ch211-11k18.4	100	98.226	ENSORLG00015022862	si:ch211-11k18.4	100	98.226	Oryzias_latipes_hsok
ENSORLG00020012386	si:ch211-11k18.4	100	96.231	ENSOMEG00000018686	si:ch211-11k18.4	100	96.231	Oryzias_melastigma
ENSORLG00020012386	si:ch211-11k18.4	99	59.778	ENSOMEG00000003154	si:dkey-98f17.5	100	59.862	Oryzias_melastigma
ENSORLG00020012386	si:ch211-11k18.4	99	75.333	ENSPKIG00000023918	-	98	75.333	Paramormyrops_kingsleyae
ENSORLG00020012386	si:ch211-11k18.4	99	60.889	ENSPKIG00000024621	si:dkey-98f17.5	100	60.889	Paramormyrops_kingsleyae
ENSORLG00020012386	si:ch211-11k18.4	99	78.667	ENSPKIG00000018807	si:ch211-11k18.4	100	78.667	Paramormyrops_kingsleyae
ENSORLG00020012386	si:ch211-11k18.4	99	60.667	ENSPMGG00000019065	si:dkey-98f17.5	100	60.667	Periophthalmus_magnuspinnatus
ENSORLG00020012386	si:ch211-11k18.4	100	87.140	ENSPMGG00000016507	si:ch211-11k18.4	100	87.140	Periophthalmus_magnuspinnatus
ENSORLG00020012386	si:ch211-11k18.4	100	87.140	ENSPFOG00000007976	si:ch211-11k18.4	100	87.140	Poecilia_formosa
ENSORLG00020012386	si:ch211-11k18.4	99	59.603	ENSPFOG00000015142	si:dkey-98f17.5	100	59.603	Poecilia_formosa
ENSORLG00020012386	si:ch211-11k18.4	100	87.140	ENSPLAG00000019794	si:ch211-11k18.4	100	87.140	Poecilia_latipinna
ENSORLG00020012386	si:ch211-11k18.4	99	59.778	ENSPLAG00000003709	si:dkey-98f17.5	100	59.778	Poecilia_latipinna
ENSORLG00020012386	si:ch211-11k18.4	99	59.778	ENSPMEG00000018709	si:dkey-98f17.5	94	59.778	Poecilia_mexicana
ENSORLG00020012386	si:ch211-11k18.4	100	87.140	ENSPMEG00000024198	si:ch211-11k18.4	100	87.140	Poecilia_mexicana
ENSORLG00020012386	si:ch211-11k18.4	98	60.682	ENSPREG00000000708	si:dkey-98f17.5	100	60.000	Poecilia_reticulata
ENSORLG00020012386	si:ch211-11k18.4	93	81.412	ENSPREG00000015319	si:ch211-11k18.4	87	86.162	Poecilia_reticulata
ENSORLG00020012386	si:ch211-11k18.4	100	87.361	ENSPNYG00000017099	si:ch211-11k18.4	100	87.361	Pundamilia_nyererei
ENSORLG00020012386	si:ch211-11k18.4	99	60.667	ENSPNYG00000017266	si:dkey-98f17.5	100	60.667	Pundamilia_nyererei
ENSORLG00020012386	si:ch211-11k18.4	99	81.514	ENSPNAG00000022138	si:ch211-11k18.4	99	81.514	Pygocentrus_nattereri
ENSORLG00020012386	si:ch211-11k18.4	99	59.111	ENSPNAG00000021352	si:dkey-98f17.5	100	59.111	Pygocentrus_nattereri
ENSORLG00020012386	si:ch211-11k18.4	99	76.169	ENSSFOG00015000985	si:ch211-11k18.4	94	76.169	Scleropages_formosus
ENSORLG00020012386	si:ch211-11k18.4	99	58.150	ENSSFOG00015017965	si:dkey-98f17.5	100	58.093	Scleropages_formosus
ENSORLG00020012386	si:ch211-11k18.4	98	60.449	ENSSMAG00000011905	si:dkey-98f17.5	99	60.449	Scophthalmus_maximus
ENSORLG00020012386	si:ch211-11k18.4	100	84.922	ENSSMAG00000009651	si:ch211-11k18.4	100	84.922	Scophthalmus_maximus
ENSORLG00020012386	si:ch211-11k18.4	100	86.475	ENSSDUG00000016411	si:ch211-11k18.4	100	86.475	Seriola_dumerili
ENSORLG00020012386	si:ch211-11k18.4	98	60.538	ENSSDUG00000013457	si:dkey-98f17.5	99	60.538	Seriola_dumerili
ENSORLG00020012386	si:ch211-11k18.4	100	86.253	ENSSLDG00000019145	si:ch211-11k18.4	100	86.253	Seriola_lalandi_dorsalis
ENSORLG00020012386	si:ch211-11k18.4	98	60.314	ENSSLDG00000025395	si:dkey-98f17.5	99	60.314	Seriola_lalandi_dorsalis
ENSORLG00020012386	si:ch211-11k18.4	87	66.244	ENSSPUG00000010096	-	99	66.244	Sphenodon_punctatus
ENSORLG00020012386	si:ch211-11k18.4	99	60.889	ENSSPAG00000018800	si:dkey-98f17.5	100	60.889	Stegastes_partitus
ENSORLG00020012386	si:ch211-11k18.4	100	87.805	ENSSPAG00000010697	si:ch211-11k18.4	100	87.805	Stegastes_partitus
ENSORLG00020012386	si:ch211-11k18.4	100	85.144	ENSTRUG00000020291	si:ch211-11k18.4	100	85.144	Takifugu_rubripes
ENSORLG00020012386	si:ch211-11k18.4	99	58.667	ENSTRUG00000021287	si:dkey-98f17.5	100	58.667	Takifugu_rubripes
ENSORLG00020012386	si:ch211-11k18.4	99	65.487	ENSXETG00000031783	-	99	65.487	Xenopus_tropicalis
ENSORLG00020012386	si:ch211-11k18.4	100	82.040	ENSXCOG00000018094	si:ch211-11k18.4	100	81.457	Xiphophorus_couchianus
ENSORLG00020012386	si:ch211-11k18.4	99	59.911	ENSXCOG00000017002	si:dkey-98f17.5	100	59.911	Xiphophorus_couchianus
ENSORLG00020012386	si:ch211-11k18.4	100	86.475	ENSXMAG00000021235	si:ch211-11k18.4	100	86.475	Xiphophorus_maculatus
ENSORLG00020012386	si:ch211-11k18.4	99	60.222	ENSXMAG00000007688	si:dkey-98f17.5	95	59.556	Xiphophorus_maculatus