EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020012454 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.1
Alias: -
Full Name: RNA-binding protein 4.1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 3234 bases
Position: chr18:25941440-25944673
Accession: 101169378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020011527	zf-CCHC	PF00098.23	5.4e-08	1	1
ENSORLP00020011527	RRM_1	PF00076.22	1.6e-29	1	2
ENSORLP00020011527	RRM_1	PF00076.22	1.6e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020018444	-	1439	-	ENSORLP00020011527	417 (aa)	XP_004075077	H2MAT6

Gene Model

Click here to download ENSORLG00020012454's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020012454's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020012454	rbm4.1	57	52.349	ENSORLG00020012474	rbm4.3	83	47.126
ENSORLG00020012454	rbm4.1	61	50.980	ENSORLG00020012482	rbm4.3	90	51.299
ENSORLG00020012454	rbm4.1	57	53.020	ENSORLG00020012464	rbm4.3	77	53.020

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020012454	rbm4.1	100	79.572	ENSAPOG00000012353	rbm4.1	100	79.048	Acanthochromis_polyacanthus
ENSORLG00020012454	rbm4.1	100	78.860	ENSACIG00000016482	rbm4.1	100	78.860	Amphilophus_citrinellus
ENSORLG00020012454	rbm4.1	100	80.048	ENSAOCG00000010915	rbm4.1	100	79.524	Amphiprion_ocellaris
ENSORLG00020012454	rbm4.1	100	80.048	ENSAPEG00000009494	rbm4.1	100	79.524	Amphiprion_percula
ENSORLG00020012454	rbm4.1	100	78.147	ENSATEG00000001904	rbm4.1	100	78.147	Anabas_testudineus
ENSORLG00020012454	rbm4.1	100	47.981	ENSACLG00000007740	-	100	47.031	Astatotilapia_calliptera
ENSORLG00020012454	rbm4.1	100	78.860	ENSACLG00000007722	rbm4.1	100	78.860	Astatotilapia_calliptera
ENSORLG00020012454	rbm4.1	100	61.098	ENSAMXG00000036611	rbm4.1	100	60.664	Astyanax_mexicanus
ENSORLG00020012454	rbm4.1	100	68.810	ENSCSEG00000014365	rbm4.1	100	68.810	Cynoglossus_semilaevis
ENSORLG00020012454	rbm4.1	95	48.628	ENSCSEG00000014359	-	95	48.649	Cynoglossus_semilaevis
ENSORLG00020012454	rbm4.1	100	77.751	ENSCVAG00000019349	rbm4.1	100	77.751	Cyprinodon_variegatus
ENSORLG00020012454	rbm4.1	100	65.888	ENSDARG00000036386	rbm4.1	100	65.888	Danio_rerio
ENSORLG00020012454	rbm4.1	100	61.939	ENSELUG00000013205	rbm4.1	100	59.815	Esox_lucius
ENSORLG00020012454	rbm4.1	100	77.804	ENSFHEG00000022926	rbm4.1	100	77.804	Fundulus_heteroclitus
ENSORLG00020012454	rbm4.1	92	49.746	ENSGMOG00000007455	-	100	49.070	Gadus_morhua
ENSORLG00020012454	rbm4.1	100	64.133	ENSGMOG00000007464	rbm4.1	100	65.321	Gadus_morhua
ENSORLG00020012454	rbm4.1	100	75.476	ENSGAFG00000019302	rbm4.1	100	75.476	Gambusia_affinis
ENSORLG00020012454	rbm4.1	99	89.362	ENSGACG00000000822	rbm4.1	99	89.840	Gasterosteus_aculeatus
ENSORLG00020012454	rbm4.1	90	49.602	ENSGACG00000000821	-	90	49.211	Gasterosteus_aculeatus
ENSORLG00020012454	rbm4.1	100	78.860	ENSHBUG00000011610	rbm4.1	100	78.860	Haplochromis_burtoni
ENSORLG00020012454	rbm4.1	92	67.179	ENSHCOG00000011403	rbm4.1	95	67.179	Hippocampus_comes
ENSORLG00020012454	rbm4.1	100	58.581	ENSIPUG00000022931	rbm4.1	100	58.904	Ictalurus_punctatus
ENSORLG00020012454	rbm4.1	100	48.113	ENSIPUG00000022937	rbm4.2	100	48.463	Ictalurus_punctatus
ENSORLG00020012454	rbm4.1	100	75.000	ENSKMAG00000006556	rbm4.1	100	75.000	Kryptolebias_marmoratus
ENSORLG00020012454	rbm4.1	100	78.385	ENSLBEG00000019782	rbm4.1	100	78.385	Labrus_bergylta
ENSORLG00020012454	rbm4.1	100	47.743	ENSLBEG00000019756	-	90	60.897	Labrus_bergylta
ENSORLG00020012454	rbm4.1	95	49.386	ENSMAMG00000001760	-	95	48.655	Mastacembelus_armatus
ENSORLG00020012454	rbm4.1	100	79.097	ENSMAMG00000001765	rbm4.1	100	79.097	Mastacembelus_armatus
ENSORLG00020012454	rbm4.1	100	78.860	ENSMZEG00005009205	rbm4.1	100	78.860	Maylandia_zebra
ENSORLG00020012454	rbm4.1	100	76.123	ENSMMOG00000020479	rbm4.1	100	76.123	Mola_mola
ENSORLG00020012454	rbm4.1	100	78.333	ENSMALG00000020544	rbm4.1	100	78.333	Monopterus_albus
ENSORLG00020012454	rbm4.1	96	50.123	ENSMALG00000020557	-	96	49.377	Monopterus_albus
ENSORLG00020012454	rbm4.1	100	78.860	ENSNBRG00000017755	rbm4.1	100	78.860	Neolamprologus_brichardi
ENSORLG00020012454	rbm4.1	100	78.622	ENSONIG00000015730	rbm4.1	100	78.622	Oreochromis_niloticus
ENSORLG00020012454	rbm4.1	100	100.000	ENSORLG00000012496	rbm4.1	100	100.000	Oryzias_latipes
ENSORLG00020012454	rbm4.1	100	99.760	ENSORLG00015013678	rbm4.1	100	99.760	Oryzias_latipes_hsok
ENSORLG00020012454	rbm4.1	100	97.842	ENSOMEG00000001001	rbm4.1	100	97.842	Oryzias_melastigma
ENSORLG00020012454	rbm4.1	100	55.506	ENSPKIG00000020805	rbm4.1	85	77.536	Paramormyrops_kingsleyae
ENSORLG00020012454	rbm4.1	100	75.714	ENSPFOG00000012675	rbm4.1	100	75.714	Poecilia_formosa
ENSORLG00020012454	rbm4.1	99	46.135	ENSPFOG00000012685	-	99	45.863	Poecilia_formosa
ENSORLG00020012454	rbm4.1	100	75.714	ENSPLAG00000018572	rbm4.1	100	75.714	Poecilia_latipinna
ENSORLG00020012454	rbm4.1	100	75.714	ENSPMEG00000006290	rbm4.1	100	75.714	Poecilia_mexicana
ENSORLG00020012454	rbm4.1	99	67.778	ENSPREG00000003764	-	99	43.287	Poecilia_reticulata
ENSORLG00020012454	rbm4.1	100	75.714	ENSPREG00000003724	rbm4.1	100	75.714	Poecilia_reticulata
ENSORLG00020012454	rbm4.1	100	78.860	ENSPNYG00000004662	rbm4.1	100	78.860	Pundamilia_nyererei
ENSORLG00020012454	rbm4.1	100	50.351	ENSPNAG00000013057	rbm4.2	100	50.351	Pygocentrus_nattereri
ENSORLG00020012454	rbm4.1	100	62.911	ENSPNAG00000002539	rbm4.1	100	63.146	Pygocentrus_nattereri
ENSORLG00020012454	rbm4.1	97	61.205	ENSSFOG00015021996	sf1	97	61.446	Scleropages_formosus
ENSORLG00020012454	rbm4.1	100	75.059	ENSSMAG00000007571	rbm4.1	100	75.534	Scophthalmus_maximus
ENSORLG00020012454	rbm4.1	100	49.289	ENSSDUG00000003936	-	100	47.166	Seriola_dumerili
ENSORLG00020012454	rbm4.1	100	79.572	ENSSDUG00000003925	rbm4.1	100	79.572	Seriola_dumerili
ENSORLG00020012454	rbm4.1	100	79.572	ENSSLDG00000013147	rbm4.1	100	79.572	Seriola_lalandi_dorsalis
ENSORLG00020012454	rbm4.1	100	47.775	ENSSLDG00000013157	-	100	48.394	Seriola_lalandi_dorsalis
ENSORLG00020012454	rbm4.1	100	46.429	ENSSPAG00000019046	-	100	46.429	Stegastes_partitus
ENSORLG00020012454	rbm4.1	100	79.384	ENSSPAG00000019053	rbm4.1	100	80.095	Stegastes_partitus
ENSORLG00020012454	rbm4.1	94	45.074	ENSTRUG00000013328	-	99	44.366	Takifugu_rubripes
ENSORLG00020012454	rbm4.1	100	71.190	ENSTRUG00000013334	rbm4.1	100	71.190	Takifugu_rubripes
ENSORLG00020012454	rbm4.1	100	53.589	ENSTNIG00000004821	rbm4.1	100	84.651	Tetraodon_nigroviridis
ENSORLG00020012454	rbm4.1	96	45.545	ENSTNIG00000000316	-	96	45.843	Tetraodon_nigroviridis
ENSORLG00020012454	rbm4.1	100	75.238	ENSXCOG00000003731	rbm4.1	100	75.238	Xiphophorus_couchianus
ENSORLG00020012454	rbm4.1	94	71.779	ENSXMAG00000008059	-	99	45.863	Xiphophorus_maculatus
ENSORLG00020012454	rbm4.1	100	75.476	ENSXMAG00000008069	rbm4.1	100	75.476	Xiphophorus_maculatus