EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020012464 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.3 (1 of many)
Alias: -
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 1866 bases
Position: chr18:25929492-25931357
Accession: 101169128
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020028807	RRM_5	PF13893.6	6.8e-10	1	2
ENSORLP00020028807	RRM_5	PF13893.6	6.8e-10	2	2
ENSORLP00020028807	RRM_1	PF00076.22	3.6e-30	1	2
ENSORLP00020028807	RRM_1	PF00076.22	3.6e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020018449	-	1254	-	ENSORLP00020028807	346 (aa)	XP_004075076	H2MAQ7

Gene Model

Click here to download ENSORLG00020012464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020012464's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020012464	rbm4.3	77	53.020	ENSORLG00020012454	rbm4.1	57	53.020
ENSORLG00020012464	rbm4.3	99	53.221	ENSORLG00020012482	rbm4.3	97	51.297
ENSORLG00020012464	rbm4.3	100	93.353	ENSORLG00020012474	rbm4.3	100	93.353

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020012464	rbm4.3	99	58.757	ENSAPOG00000002991	rbm4.3	99	59.322	Acanthochromis_polyacanthus
ENSORLG00020012464	rbm4.3	100	73.538	ENSAPOG00000002953	rbm4.3	100	74.095	Acanthochromis_polyacanthus
ENSORLG00020012464	rbm4.3	100	74.571	ENSACIG00000021311	-	100	76.286	Amphilophus_citrinellus
ENSORLG00020012464	rbm4.3	96	59.827	ENSACIG00000021295	rbm4.3	96	60.405	Amphilophus_citrinellus
ENSORLG00020012464	rbm4.3	100	72.702	ENSAOCG00000008015	rbm4.3	100	73.538	Amphiprion_ocellaris
ENSORLG00020012464	rbm4.3	97	57.267	ENSAOCG00000007992	rbm4.3	96	57.558	Amphiprion_ocellaris
ENSORLG00020012464	rbm4.3	100	73.538	ENSAPEG00000017324	rbm4.3	100	72.981	Amphiprion_percula
ENSORLG00020012464	rbm4.3	97	57.267	ENSAPEG00000017288	rbm4.3	96	57.558	Amphiprion_percula
ENSORLG00020012464	rbm4.3	100	71.031	ENSATEG00000019375	rbm4.3	100	72.981	Anabas_testudineus
ENSORLG00020012464	rbm4.3	99	61.429	ENSATEG00000019395	rbm4.3	99	62.000	Anabas_testudineus
ENSORLG00020012464	rbm4.3	100	75.714	ENSACLG00000010620	-	100	77.429	Astatotilapia_calliptera
ENSORLG00020012464	rbm4.3	97	59.538	ENSACLG00000010642	rbm4.3	96	57.971	Astatotilapia_calliptera
ENSORLG00020012464	rbm4.3	56	69.588	ENSAMXG00000040224	rbm4.3	77	69.072	Astyanax_mexicanus
ENSORLG00020012464	rbm4.3	100	69.916	ENSCSEG00000013659	rbm4.3	100	70.474	Cynoglossus_semilaevis
ENSORLG00020012464	rbm4.3	100	76.000	ENSCVAG00000008508	rbm4.3	100	76.857	Cyprinodon_variegatus
ENSORLG00020012464	rbm4.3	95	63.127	ENSDARG00000022129	rbm4.3	97	65.318	Danio_rerio
ENSORLG00020012464	rbm4.3	99	64.167	ENSELUG00000022155	rbm4.3	97	63.429	Esox_lucius
ENSORLG00020012464	rbm4.3	99	66.111	ENSELUG00000022150	rbm4.3	97	64.000	Esox_lucius
ENSORLG00020012464	rbm4.3	100	57.300	ENSELUG00000022168	rbm4.3	100	60.331	Esox_lucius
ENSORLG00020012464	rbm4.3	97	56.410	ENSFHEG00000023096	rbm4.3	97	55.271	Fundulus_heteroclitus
ENSORLG00020012464	rbm4.3	82	75.088	ENSFHEG00000023137	rbm4.3	86	77.580	Fundulus_heteroclitus
ENSORLG00020012464	rbm4.3	100	55.989	ENSGAFG00000001935	rbm4.3	100	57.341	Gambusia_affinis
ENSORLG00020012464	rbm4.3	91	67.568	ENSGACG00000019980	rbm4.3	95	59.078	Gasterosteus_aculeatus
ENSORLG00020012464	rbm4.3	100	75.714	ENSHBUG00000009020	-	100	77.429	Haplochromis_burtoni
ENSORLG00020012464	rbm4.3	97	59.770	ENSHBUG00000009051	rbm4.3	96	58.261	Haplochromis_burtoni
ENSORLG00020012464	rbm4.3	95	68.437	ENSHCOG00000010349	rbm4.3	100	70.391	Hippocampus_comes
ENSORLG00020012464	rbm4.3	100	60.497	ENSIPUG00000022943	RBM4B	100	60.221	Ictalurus_punctatus
ENSORLG00020012464	rbm4.3	100	74.352	ENSKMAG00000017468	rbm4.3	100	73.775	Kryptolebias_marmoratus
ENSORLG00020012464	rbm4.3	100	69.722	ENSLBEG00000001071	-	100	72.222	Labrus_bergylta
ENSORLG00020012464	rbm4.3	53	66.845	ENSLBEG00000001025	rbm4.3	81	65.193	Labrus_bergylta
ENSORLG00020012464	rbm4.3	95	55.616	ENSLOCG00000002755	rbm4.3	100	55.497	Lepisosteus_oculatus
ENSORLG00020012464	rbm4.3	99	60.452	ENSMAMG00000004701	rbm4.3	99	61.017	Mastacembelus_armatus
ENSORLG00020012464	rbm4.3	100	71.866	ENSMAMG00000004715	-	84	73.816	Mastacembelus_armatus
ENSORLG00020012464	rbm4.3	97	59.538	ENSMZEG00005028540	rbm4.3	96	57.971	Maylandia_zebra
ENSORLG00020012464	rbm4.3	100	72.286	ENSMZEG00005007417	-	100	74.000	Maylandia_zebra
ENSORLG00020012464	rbm4.3	87	69.180	ENSMZEG00005028537	-	85	68.910	Maylandia_zebra
ENSORLG00020012464	rbm4.3	88	61.765	ENSMZEG00005007441	rbm4.3	79	60.000	Maylandia_zebra
ENSORLG00020012464	rbm4.3	97	61.272	ENSMMOG00000012191	rbm4.3	96	60.290	Mola_mola
ENSORLG00020012464	rbm4.3	87	71.895	ENSMALG00000003001	rbm4.3	87	74.183	Monopterus_albus
ENSORLG00020012464	rbm4.3	97	57.864	ENSMALG00000003032	rbm4.3	94	58.491	Monopterus_albus
ENSORLG00020012464	rbm4.3	99	58.192	ENSMALG00000015014	-	89	58.934	Monopterus_albus
ENSORLG00020012464	rbm4.3	97	58.841	ENSNBRG00000012372	rbm4.3	96	57.391	Neolamprologus_brichardi
ENSORLG00020012464	rbm4.3	100	75.714	ENSONIG00000018380	-	100	77.429	Oreochromis_niloticus
ENSORLG00020012464	rbm4.3	97	58.166	ENSONIG00000018378	rbm4.3	96	56.734	Oreochromis_niloticus
ENSORLG00020012464	rbm4.3	100	100.000	ENSORLG00000012473	rbm4.3	100	100.000	Oryzias_latipes
ENSORLG00020012464	rbm4.3	100	93.353	ENSORLG00000011589	rbm4.3	100	93.353	Oryzias_latipes
ENSORLG00020012464	rbm4.3	96	52.616	ENSORLG00000024749	rbm4.3	96	51.009	Oryzias_latipes
ENSORLG00020012464	rbm4.3	100	93.064	ENSORLG00015013698	rbm4.3	100	93.064	Oryzias_latipes_hsok
ENSORLG00020012464	rbm4.3	100	99.422	ENSORLG00015013686	rbm4.3	100	99.422	Oryzias_latipes_hsok
ENSORLG00020012464	rbm4.3	97	52.312	ENSORLG00015013721	rbm4.3	96	51.009	Oryzias_latipes_hsok
ENSORLG00020012464	rbm4.3	100	84.136	ENSOMEG00000005918	rbm4.3	100	85.836	Oryzias_melastigma
ENSORLG00020012464	rbm4.3	100	88.473	ENSOMEG00000005929	rbm4.3	100	89.914	Oryzias_melastigma
ENSORLG00020012464	rbm4.3	92	64.815	ENSPKIG00000007001	rbm4.3	97	60.174	Paramormyrops_kingsleyae
ENSORLG00020012464	rbm4.3	97	57.550	ENSPLAG00000006077	rbm4.3	97	57.143	Poecilia_latipinna
ENSORLG00020012464	rbm4.3	100	72.981	ENSPLAG00000006131	rbm4.3	100	74.095	Poecilia_latipinna
ENSORLG00020012464	rbm4.3	97	58.000	ENSPMEG00000024260	rbm4.3	97	57.061	Poecilia_mexicana
ENSORLG00020012464	rbm4.3	100	76.000	ENSPMEG00000024263	rbm4.3	100	77.143	Poecilia_mexicana
ENSORLG00020012464	rbm4.3	100	72.981	ENSPMEG00000024271	rbm4.3	100	74.095	Poecilia_mexicana
ENSORLG00020012464	rbm4.3	100	67.039	ENSPREG00000002156	rbm4.3	100	68.156	Poecilia_reticulata
ENSORLG00020012464	rbm4.3	99	57.967	ENSPREG00000002093	-	97	58.213	Poecilia_reticulata
ENSORLG00020012464	rbm4.3	97	59.078	ENSPNYG00000018564	rbm4.3	96	57.514	Pundamilia_nyererei
ENSORLG00020012464	rbm4.3	100	75.714	ENSPNYG00000018541	rbm4.3	100	77.429	Pundamilia_nyererei
ENSORLG00020012464	rbm4.3	100	60.163	ENSPNAG00000013053	rbm4.3	100	60.163	Pygocentrus_nattereri
ENSORLG00020012464	rbm4.3	100	59.838	ENSSFOG00015015563	rbm4.3	100	57.682	Scleropages_formosus
ENSORLG00020012464	rbm4.3	96	57.558	ENSSMAG00000013653	rbm4.3	96	55.263	Scophthalmus_maximus
ENSORLG00020012464	rbm4.3	100	72.145	ENSSMAG00000013644	rbm4.3	100	71.588	Scophthalmus_maximus
ENSORLG00020012464	rbm4.3	100	71.866	ENSSDUG00000018435	rbm4.3	100	73.816	Seriola_dumerili
ENSORLG00020012464	rbm4.3	97	58.960	ENSSDUG00000018422	rbm4.3	96	59.538	Seriola_dumerili
ENSORLG00020012464	rbm4.3	100	71.866	ENSSLDG00000017204	rbm4.3	100	73.816	Seriola_lalandi_dorsalis
ENSORLG00020012464	rbm4.3	96	59.130	ENSSLDG00000017182	rbm4.3	96	59.420	Seriola_lalandi_dorsalis
ENSORLG00020012464	rbm4.3	99	56.583	ENSSPAG00000008041	rbm4.3	85	57.627	Stegastes_partitus
ENSORLG00020012464	rbm4.3	100	73.816	ENSSPAG00000008062	rbm4.3	100	74.373	Stegastes_partitus
ENSORLG00020012464	rbm4.3	100	73.816	ENSTRUG00000020901	rbm4.3	100	74.373	Takifugu_rubripes
ENSORLG00020012464	rbm4.3	98	59.259	ENSTRUG00000023874	rbm4.3	98	60.684	Takifugu_rubripes
ENSORLG00020012464	rbm4.3	100	71.309	ENSTNIG00000005668	rbm4.3	100	71.866	Tetraodon_nigroviridis
ENSORLG00020012464	rbm4.3	100	56.787	ENSXCOG00000005996	rbm4.3	100	57.222	Xiphophorus_couchianus
ENSORLG00020012464	rbm4.3	100	76.286	ENSXCOG00000006001	rbm4.3	100	77.429	Xiphophorus_couchianus
ENSORLG00020012464	rbm4.3	100	74.095	ENSXMAG00000011698	rbm4.3	100	75.209	Xiphophorus_maculatus
ENSORLG00020012464	rbm4.3	100	76.286	ENSXMAG00000021997	rbm4.3	100	77.429	Xiphophorus_maculatus
ENSORLG00020012464	rbm4.3	97	57.349	ENSXMAG00000025173	rbm4.3	97	58.000	Xiphophorus_maculatus