EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020012474 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.3 (1 of many)
Alias: -
Full Name: RNA binding motif protein 4.3
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 6304 bases
Position: chr18:25919461-25925764
Accession: ZDB-GENE-040426-1938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020011547	RRM_5	PF13893.6	1.1e-09	1	2
ENSORLP00020011547	RRM_5	PF13893.6	1.1e-09	2	2
ENSORLP00020011547	RRM_1	PF00076.22	3.9e-29	1	2
ENSORLP00020011547	RRM_1	PF00076.22	3.9e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020031827	-	5098	-	ENSORLP00020011547	344 (aa)	-	-

Gene Model

Click here to download ENSORLG00020012474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020012474's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020012474	rbm4.3	100	93.353	ENSORLG00020012464	rbm4.3	100	93.353
ENSORLG00020012474	rbm4.3	99	54.494	ENSORLG00020012482	rbm4.3	97	52.738
ENSORLG00020012474	rbm4.3	83	47.126	ENSORLG00020012454	rbm4.1	57	52.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020012474	rbm4.3	99	59.605	ENSAPOG00000002991	rbm4.3	99	60.169	Acanthochromis_polyacanthus
ENSORLG00020012474	rbm4.3	100	76.045	ENSAPOG00000002953	rbm4.3	100	76.880	Acanthochromis_polyacanthus
ENSORLG00020012474	rbm4.3	100	77.143	ENSACIG00000021311	-	100	79.143	Amphilophus_citrinellus
ENSORLG00020012474	rbm4.3	96	60.174	ENSACIG00000021295	rbm4.3	96	59.593	Amphilophus_citrinellus
ENSORLG00020012474	rbm4.3	97	57.849	ENSAOCG00000007992	rbm4.3	96	58.140	Amphiprion_ocellaris
ENSORLG00020012474	rbm4.3	100	75.209	ENSAOCG00000008015	rbm4.3	100	76.323	Amphiprion_ocellaris
ENSORLG00020012474	rbm4.3	97	57.849	ENSAPEG00000017288	rbm4.3	96	58.140	Amphiprion_percula
ENSORLG00020012474	rbm4.3	100	76.045	ENSAPEG00000017324	rbm4.3	100	75.766	Amphiprion_percula
ENSORLG00020012474	rbm4.3	100	74.373	ENSATEG00000019375	rbm4.3	100	76.602	Anabas_testudineus
ENSORLG00020012474	rbm4.3	99	61.714	ENSATEG00000019395	rbm4.3	99	61.605	Anabas_testudineus
ENSORLG00020012474	rbm4.3	100	77.714	ENSACLG00000010620	-	100	79.714	Astatotilapia_calliptera
ENSORLG00020012474	rbm4.3	97	59.710	ENSACLG00000010642	rbm4.3	96	58.430	Astatotilapia_calliptera
ENSORLG00020012474	rbm4.3	56	70.103	ENSAMXG00000040224	rbm4.3	77	69.588	Astyanax_mexicanus
ENSORLG00020012474	rbm4.3	100	72.981	ENSCSEG00000013659	rbm4.3	100	73.816	Cynoglossus_semilaevis
ENSORLG00020012474	rbm4.3	100	78.286	ENSCVAG00000008508	rbm4.3	100	79.143	Cyprinodon_variegatus
ENSORLG00020012474	rbm4.3	99	58.101	ENSCVAG00000008502	rbm4.3	97	58.140	Cyprinodon_variegatus
ENSORLG00020012474	rbm4.3	95	63.314	ENSDARG00000022129	rbm4.3	97	64.740	Danio_rerio
ENSORLG00020012474	rbm4.3	100	57.300	ENSELUG00000022168	rbm4.3	100	60.606	Esox_lucius
ENSORLG00020012474	rbm4.3	99	67.222	ENSELUG00000022150	rbm4.3	97	65.143	Esox_lucius
ENSORLG00020012474	rbm4.3	99	67.500	ENSELUG00000022155	rbm4.3	97	66.857	Esox_lucius
ENSORLG00020012474	rbm4.3	82	77.193	ENSFHEG00000023137	rbm4.3	86	79.715	Fundulus_heteroclitus
ENSORLG00020012474	rbm4.3	97	56.980	ENSFHEG00000023096	rbm4.3	97	55.840	Fundulus_heteroclitus
ENSORLG00020012474	rbm4.3	100	56.546	ENSGAFG00000001935	rbm4.3	100	58.496	Gambusia_affinis
ENSORLG00020012474	rbm4.3	96	58.790	ENSGACG00000019980	rbm4.3	95	58.092	Gasterosteus_aculeatus
ENSORLG00020012474	rbm4.3	97	60.000	ENSHBUG00000009051	rbm4.3	96	58.721	Haplochromis_burtoni
ENSORLG00020012474	rbm4.3	100	77.714	ENSHBUG00000009020	-	100	79.714	Haplochromis_burtoni
ENSORLG00020012474	rbm4.3	95	68.546	ENSHCOG00000010349	rbm4.3	100	70.787	Hippocampus_comes
ENSORLG00020012474	rbm4.3	100	60.773	ENSIPUG00000022943	RBM4B	100	60.497	Ictalurus_punctatus
ENSORLG00020012474	rbm4.3	100	74.352	ENSKMAG00000017468	rbm4.3	100	74.063	Kryptolebias_marmoratus
ENSORLG00020012474	rbm4.3	54	66.845	ENSLBEG00000001025	rbm4.3	81	65.193	Labrus_bergylta
ENSORLG00020012474	rbm4.3	100	72.500	ENSLBEG00000001071	-	100	74.444	Labrus_bergylta
ENSORLG00020012474	rbm4.3	95	56.438	ENSLOCG00000002755	rbm4.3	100	56.545	Lepisosteus_oculatus
ENSORLG00020012474	rbm4.3	100	74.930	ENSMAMG00000004715	-	84	77.159	Mastacembelus_armatus
ENSORLG00020012474	rbm4.3	99	61.299	ENSMAMG00000004701	rbm4.3	99	60.169	Mastacembelus_armatus
ENSORLG00020012474	rbm4.3	87	71.475	ENSMZEG00005028537	-	85	71.474	Maylandia_zebra
ENSORLG00020012474	rbm4.3	88	61.967	ENSMZEG00005007441	rbm4.3	79	60.526	Maylandia_zebra
ENSORLG00020012474	rbm4.3	100	74.286	ENSMZEG00005007417	-	100	76.286	Maylandia_zebra
ENSORLG00020012474	rbm4.3	97	59.710	ENSMZEG00005028540	rbm4.3	96	58.430	Maylandia_zebra
ENSORLG00020012474	rbm4.3	97	61.850	ENSMMOG00000012191	rbm4.3	96	59.012	Mola_mola
ENSORLG00020012474	rbm4.3	50	80.117	ENSMMOG00000012143	rbm4.3	98	80.117	Mola_mola
ENSORLG00020012474	rbm4.3	99	58.757	ENSMALG00000015014	-	89	59.561	Monopterus_albus
ENSORLG00020012474	rbm4.3	87	75.410	ENSMALG00000003001	rbm4.3	87	77.778	Monopterus_albus
ENSORLG00020012474	rbm4.3	97	58.457	ENSMALG00000003032	rbm4.3	93	59.365	Monopterus_albus
ENSORLG00020012474	rbm4.3	97	59.420	ENSNBRG00000012372	rbm4.3	96	57.849	Neolamprologus_brichardi
ENSORLG00020012474	rbm4.3	97	58.739	ENSONIG00000018378	rbm4.3	96	57.391	Oreochromis_niloticus
ENSORLG00020012474	rbm4.3	100	77.714	ENSONIG00000018380	-	100	79.714	Oreochromis_niloticus
ENSORLG00020012474	rbm4.3	100	93.353	ENSORLG00000012473	rbm4.3	100	93.353	Oryzias_latipes
ENSORLG00020012474	rbm4.3	100	99.419	ENSORLG00000011589	rbm4.3	100	99.419	Oryzias_latipes
ENSORLG00020012474	rbm4.3	96	54.070	ENSORLG00000024749	rbm4.3	96	52.450	Oryzias_latipes
ENSORLG00020012474	rbm4.3	97	53.757	ENSORLG00015013721	rbm4.3	96	52.450	Oryzias_latipes_hsok
ENSORLG00020012474	rbm4.3	100	93.353	ENSORLG00015013686	rbm4.3	100	93.353	Oryzias_latipes_hsok
ENSORLG00020012474	rbm4.3	100	99.128	ENSORLG00015013698	rbm4.3	100	99.128	Oryzias_latipes_hsok
ENSORLG00020012474	rbm4.3	100	94.783	ENSOMEG00000005929	rbm4.3	100	94.783	Oryzias_melastigma
ENSORLG00020012474	rbm4.3	100	85.836	ENSOMEG00000005918	rbm4.3	100	86.402	Oryzias_melastigma
ENSORLG00020012474	rbm4.3	92	66.975	ENSPKIG00000007001	rbm4.3	100	61.389	Paramormyrops_kingsleyae
ENSORLG00020012474	rbm4.3	100	74.373	ENSPLAG00000006131	rbm4.3	100	75.487	Poecilia_latipinna
ENSORLG00020012474	rbm4.3	97	58.405	ENSPLAG00000006077	rbm4.3	97	56.857	Poecilia_latipinna
ENSORLG00020012474	rbm4.3	100	74.095	ENSPMEG00000024271	rbm4.3	100	75.209	Poecilia_mexicana
ENSORLG00020012474	rbm4.3	97	58.571	ENSPMEG00000024260	rbm4.3	97	56.571	Poecilia_mexicana
ENSORLG00020012474	rbm4.3	100	78.286	ENSPMEG00000024263	rbm4.3	100	79.429	Poecilia_mexicana
ENSORLG00020012474	rbm4.3	99	59.341	ENSPREG00000002093	-	97	57.429	Poecilia_reticulata
ENSORLG00020012474	rbm4.3	100	69.832	ENSPREG00000002156	rbm4.3	100	70.670	Poecilia_reticulata
ENSORLG00020012474	rbm4.3	100	77.714	ENSPNYG00000018541	rbm4.3	100	79.714	Pundamilia_nyererei
ENSORLG00020012474	rbm4.3	97	59.249	ENSPNYG00000018564	rbm4.3	96	58.187	Pundamilia_nyererei
ENSORLG00020012474	rbm4.3	100	61.518	ENSPNAG00000013053	rbm4.3	100	61.518	Pygocentrus_nattereri
ENSORLG00020012474	rbm4.3	100	62.264	ENSSFOG00015015563	rbm4.3	100	59.569	Scleropages_formosus
ENSORLG00020012474	rbm4.3	96	57.726	ENSSMAG00000013653	rbm4.3	96	55.263	Scophthalmus_maximus
ENSORLG00020012474	rbm4.3	100	75.209	ENSSMAG00000013644	rbm4.3	100	74.930	Scophthalmus_maximus
ENSORLG00020012474	rbm4.3	100	74.373	ENSSDUG00000018435	rbm4.3	100	76.602	Seriola_dumerili
ENSORLG00020012474	rbm4.3	97	59.538	ENSSDUG00000018422	rbm4.3	96	58.841	Seriola_dumerili
ENSORLG00020012474	rbm4.3	100	74.373	ENSSLDG00000017204	rbm4.3	100	76.602	Seriola_lalandi_dorsalis
ENSORLG00020012474	rbm4.3	96	59.710	ENSSLDG00000017182	rbm4.3	96	58.721	Seriola_lalandi_dorsalis
ENSORLG00020012474	rbm4.3	100	75.766	ENSSPAG00000008062	rbm4.3	100	76.602	Stegastes_partitus
ENSORLG00020012474	rbm4.3	99	57.423	ENSSPAG00000008041	rbm4.3	85	58.757	Stegastes_partitus
ENSORLG00020012474	rbm4.3	100	75.698	ENSTRUG00000020901	rbm4.3	100	76.536	Takifugu_rubripes
ENSORLG00020012474	rbm4.3	98	59.544	ENSTRUG00000023874	rbm4.3	98	60.286	Takifugu_rubripes
ENSORLG00020012474	rbm4.3	100	73.184	ENSTNIG00000005668	rbm4.3	100	74.022	Tetraodon_nigroviridis
ENSORLG00020012474	rbm4.3	100	78.571	ENSXCOG00000006001	rbm4.3	100	79.714	Xiphophorus_couchianus
ENSORLG00020012474	rbm4.3	100	57.500	ENSXCOG00000005996	rbm4.3	100	58.056	Xiphophorus_couchianus
ENSORLG00020012474	rbm4.3	97	58.092	ENSXMAG00000025173	rbm4.3	97	57.714	Xiphophorus_maculatus
ENSORLG00020012474	rbm4.3	100	78.571	ENSXMAG00000021997	rbm4.3	100	79.714	Xiphophorus_maculatus
ENSORLG00020012474	rbm4.3	100	74.652	ENSXMAG00000011698	rbm4.3	100	75.766	Xiphophorus_maculatus