EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020012536 (Gene tree)
Gene ID: -
Gene Symbol: lrpprc
Alias: -
Full Name: leucine-rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 52353 bases
Position: chr15:14917368-14969720
Accession: ZDB-GENE-030131-7887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020028818	PPR	PF01535.20	4.3e-36	1	5
ENSORLP00020028818	PPR	PF01535.20	4.3e-36	2	5
ENSORLP00020028818	PPR	PF01535.20	4.3e-36	3	5
ENSORLP00020028818	PPR	PF01535.20	4.3e-36	4	5
ENSORLP00020028818	PPR	PF01535.20	4.3e-36	5	5
ENSORLP00020028839	PPR	PF01535.20	8.8e-36	1	5
ENSORLP00020028839	PPR	PF01535.20	8.8e-36	2	5
ENSORLP00020028839	PPR	PF01535.20	8.8e-36	3	5
ENSORLP00020028839	PPR	PF01535.20	8.8e-36	4	5
ENSORLP00020028839	PPR	PF01535.20	8.8e-36	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020018503	-	7819	-	ENSORLP00020028818	1263 (aa)	-	-
ENSORLT00020018532	-	4659	-	ENSORLP00020028839	1325 (aa)	-	-

Gene Model

Click here to download ENSORLG00020012536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020012536's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020012536	lrpprc	99	74.821	ENSAPOG00000016610	lrpprc	91	75.385	Acanthochromis_polyacanthus
ENSORLG00020012536	lrpprc	99	51.435	ENSAMEG00000005852	LRPPRC	99	49.645	Ailuropoda_melanoleuca
ENSORLG00020012536	lrpprc	99	71.508	ENSACIG00000009604	lrpprc	90	71.880	Amphilophus_citrinellus
ENSORLG00020012536	lrpprc	99	75.258	ENSAOCG00000005886	lrpprc	92	75.475	Amphiprion_ocellaris
ENSORLG00020012536	lrpprc	99	70.024	ENSAPEG00000002937	lrpprc	90	70.517	Amphiprion_percula
ENSORLG00020012536	lrpprc	90	76.111	ENSATEG00000010555	lrpprc	90	75.969	Anabas_testudineus
ENSORLG00020012536	lrpprc	99	54.502	ENSACAG00000029278	LRPPRC	91	55.271	Anolis_carolinensis
ENSORLG00020012536	lrpprc	99	51.790	ENSANAG00000027440	LRPPRC	92	52.043	Aotus_nancymaae
ENSORLG00020012536	lrpprc	99	69.383	ENSACLG00000023712	lrpprc	95	69.901	Astatotilapia_calliptera
ENSORLG00020012536	lrpprc	99	51.513	ENSCJAG00000000794	LRPPRC	92	51.581	Callithrix_jacchus
ENSORLG00020012536	lrpprc	99	52.941	ENSCHIG00000020173	LRPPRC	94	53.519	Capra_hircus
ENSORLG00020012536	lrpprc	99	40.551	ENSCAPG00000013631	LRPPRC	94	41.686	Cavia_aperea
ENSORLG00020012536	lrpprc	95	49.544	ENSCPOG00000000204	LRPPRC	99	49.877	Cavia_porcellus
ENSORLG00020012536	lrpprc	99	51.109	ENSCCAG00000031900	LRPPRC	91	51.698	Cebus_capucinus
ENSORLG00020012536	lrpprc	99	51.152	ENSCATG00000014187	LRPPRC	87	51.588	Cercocebus_atys
ENSORLG00020012536	lrpprc	99	50.556	ENSCLAG00000005203	LRPPRC	91	51.431	Chinchilla_lanigera
ENSORLG00020012536	lrpprc	99	51.469	ENSCSAG00000013233	LRPPRC	91	51.975	Chlorocebus_sabaeus
ENSORLG00020012536	lrpprc	82	50.931	ENSCHOG00000003631	LRPPRC	76	51.871	Choloepus_hoffmanni
ENSORLG00020012536	lrpprc	99	49.446	ENSCANG00000034961	LRPPRC	95	70.443	Colobus_angolensis_palliatus
ENSORLG00020012536	lrpprc	99	51.074	ENSCGRG00001016261	Lrpprc	91	51.866	Cricetulus_griseus_chok1gshd
ENSORLG00020012536	lrpprc	99	51.074	ENSCGRG00000004072	Lrpprc	91	51.866	Cricetulus_griseus_crigri
ENSORLG00020012536	lrpprc	99	51.456	ENSCSEG00000003850	lrpprc	88	52.243	Cynoglossus_semilaevis
ENSORLG00020012536	lrpprc	99	78.742	ENSCVAG00000012967	lrpprc	91	78.709	Cyprinodon_variegatus
ENSORLG00020012536	lrpprc	99	56.748	ENSDARG00000043970	lrpprc	89	57.360	Danio_rerio
ENSORLG00020012536	lrpprc	99	50.954	ENSDNOG00000012594	-	91	51.705	Dasypus_novemcinctus
ENSORLG00020012536	lrpprc	81	40.567	ENSDNOG00000032336	-	89	41.284	Dasypus_novemcinctus
ENSORLG00020012536	lrpprc	99	51.390	ENSDORG00000012233	Lrpprc	91	52.407	Dipodomys_ordii
ENSORLG00020012536	lrpprc	99	51.274	ENSETEG00000006657	LRPPRC	92	51.935	Echinops_telfairi
ENSORLG00020012536	lrpprc	86	42.267	ENSEEUG00000012340	LRPPRC	86	43.448	Erinaceus_europaeus
ENSORLG00020012536	lrpprc	99	57.438	ENSELUG00000012803	lrpprc	94	58.365	Esox_lucius
ENSORLG00020012536	lrpprc	99	52.029	ENSFCAG00000013468	LRPPRC	92	52.946	Felis_catus
ENSORLG00020012536	lrpprc	99	49.760	ENSFALG00000012738	LRPPRC	95	49.845	Ficedula_albicollis
ENSORLG00020012536	lrpprc	99	49.326	ENSFDAG00000015328	LRPPRC	91	50.347	Fukomys_damarensis
ENSORLG00020012536	lrpprc	99	75.318	ENSFHEG00000019604	lrpprc	91	75.404	Fundulus_heteroclitus
ENSORLG00020012536	lrpprc	99	63.723	ENSGMOG00000008337	lrpprc	92	64.596	Gadus_morhua
ENSORLG00020012536	lrpprc	99	74.701	ENSGAFG00000001455	lrpprc	91	74.690	Gambusia_affinis
ENSORLG00020012536	lrpprc	99	71.746	ENSGACG00000010679	lrpprc	96	72.086	Gasterosteus_aculeatus
ENSORLG00020012536	lrpprc	99	77.468	ENSHBUG00000000393	lrpprc	89	77.709	Haplochromis_burtoni
ENSORLG00020012536	lrpprc	99	49.762	ENSHGLG00000006123	LRPPRC	91	50.657	Heterocephalus_glaber_female
ENSORLG00020012536	lrpprc	65	48.321	ENSHGLG00100005960	-	99	48.697	Heterocephalus_glaber_male
ENSORLG00020012536	lrpprc	98	70.436	ENSHCOG00000002107	lrpprc	91	70.929	Hippocampus_comes
ENSORLG00020012536	lrpprc	99	61.665	ENSIPUG00000009406	lrpprc	90	62.111	Ictalurus_punctatus
ENSORLG00020012536	lrpprc	99	51.192	ENSSTOG00000011185	LRPPRC	92	51.895	Ictidomys_tridecemlineatus
ENSORLG00020012536	lrpprc	99	51.390	ENSJJAG00000020475	Lrpprc	92	52.245	Jaculus_jaculus
ENSORLG00020012536	lrpprc	99	66.111	ENSKMAG00000003287	lrpprc	79	66.540	Kryptolebias_marmoratus
ENSORLG00020012536	lrpprc	99	60.808	ENSLBEG00000023225	lrpprc	79	74.321	Labrus_bergylta
ENSORLG00020012536	lrpprc	99	57.671	ENSLACG00000014030	LRPPRC	92	58.283	Latimeria_chalumnae
ENSORLG00020012536	lrpprc	99	61.260	ENSLOCG00000016390	lrpprc	88	61.699	Lepisosteus_oculatus
ENSORLG00020012536	lrpprc	99	48.290	ENSLAFG00000008614	LRPPRC	92	48.692	Loxodonta_africana
ENSORLG00020012536	lrpprc	99	51.072	ENSMFAG00000041560	LRPPRC	95	55.872	Macaca_fascicularis
ENSORLG00020012536	lrpprc	99	51.311	ENSMMUG00000019841	LRPPRC	95	54.828	Macaca_mulatta
ENSORLG00020012536	lrpprc	99	51.071	ENSMNEG00000031613	LRPPRC	91	51.588	Macaca_nemestrina
ENSORLG00020012536	lrpprc	99	62.864	ENSMAMG00000021835	lrpprc	90	63.432	Mastacembelus_armatus
ENSORLG00020012536	lrpprc	99	77.468	ENSMZEG00005027379	lrpprc	91	77.709	Maylandia_zebra
ENSORLG00020012536	lrpprc	99	51.233	ENSMAUG00000012118	Lrpprc	95	51.395	Mesocricetus_auratus
ENSORLG00020012536	lrpprc	98	51.486	ENSMICG00000010486	LRPPRC	92	52.326	Microcebus_murinus
ENSORLG00020012536	lrpprc	99	51.508	ENSMOCG00000006048	Lrpprc	92	52.245	Microtus_ochrogaster
ENSORLG00020012536	lrpprc	99	65.391	ENSMMOG00000007830	lrpprc	91	66.128	Mola_mola
ENSORLG00020012536	lrpprc	99	50.636	ENSMODG00000000648	LRPPRC	95	51.121	Monodelphis_domestica
ENSORLG00020012536	lrpprc	99	69.290	ENSMALG00000001271	lrpprc	91	69.366	Monopterus_albus
ENSORLG00020012536	lrpprc	99	51.072	ENSMPUG00000011800	LRPPRC	90	53.578	Mustela_putorius_furo
ENSORLG00020012536	lrpprc	98	51.084	ENSMLUG00000010575	LRPPRC	91	52.056	Myotis_lucifugus
ENSORLG00020012536	lrpprc	99	51.035	ENSNGAG00000013069	Lrpprc	91	51.826	Nannospalax_galili
ENSORLG00020012536	lrpprc	99	67.729	ENSNBRG00000013202	lrpprc	97	68.462	Neolamprologus_brichardi
ENSORLG00020012536	lrpprc	99	50.438	ENSNLEG00000016782	LRPPRC	91	51.087	Nomascus_leucogenys
ENSORLG00020012536	lrpprc	92	44.869	ENSOPRG00000016774	LRPPRC	85	45.188	Ochotona_princeps
ENSORLG00020012536	lrpprc	99	50.753	ENSODEG00000011211	LRPPRC	92	51.546	Octodon_degus
ENSORLG00020012536	lrpprc	99	77.707	ENSONIG00000000917	lrpprc	92	76.769	Oreochromis_niloticus
ENSORLG00020012536	lrpprc	61	46.488	ENSOANG00000014670	-	100	46.811	Ornithorhynchus_anatinus
ENSORLG00020012536	lrpprc	99	52.385	ENSOCUG00000015046	LRPPRC	88	53.168	Oryctolagus_cuniculus
ENSORLG00020012536	lrpprc	99	91.939	ENSORLG00000004605	lrpprc	94	86.749	Oryzias_latipes
ENSORLG00020012536	lrpprc	99	87.420	ENSORLG00015018270	lrpprc	91	87.855	Oryzias_latipes_hsok
ENSORLG00020012536	lrpprc	99	51.787	ENSOGAG00000012798	LRPPRC	92	52.599	Otolemur_garnettii
ENSORLG00020012536	lrpprc	99	52.941	ENSOARG00000006522	LRPPRC	91	53.757	Ovis_aries
ENSORLG00020012536	lrpprc	99	50.555	ENSPPAG00000040876	LRPPRC	91	51.005	Pan_paniscus
ENSORLG00020012536	lrpprc	99	51.790	ENSPPRG00000006578	LRPPRC	92	52.713	Panthera_pardus
ENSORLG00020012536	lrpprc	99	51.870	ENSPTIG00000000933	LRPPRC	92	52.791	Panthera_tigris_altaica
ENSORLG00020012536	lrpprc	99	51.472	ENSPTRG00000011880	LRPPRC	91	51.901	Pan_troglodytes
ENSORLG00020012536	lrpprc	99	51.155	ENSPANG00000020731	LRPPRC	87	51.395	Papio_anubis
ENSORLG00020012536	lrpprc	99	47.971	ENSPKIG00000022232	lrpprc	98	52.710	Paramormyrops_kingsleyae
ENSORLG00020012536	lrpprc	68	53.526	ENSPSIG00000006830	-	98	53.926	Pelodiscus_sinensis
ENSORLG00020012536	lrpprc	74	59.657	ENSPMGG00000016597	lrpprc	97	59.937	Periophthalmus_magnuspinnatus
ENSORLG00020012536	lrpprc	99	45.426	ENSPMAG00000002147	lrpprc	97	45.869	Petromyzon_marinus
ENSORLG00020012536	lrpprc	99	73.264	ENSPFOG00000011227	lrpprc	93	73.436	Poecilia_formosa
ENSORLG00020012536	lrpprc	99	73.083	ENSPLAG00000004018	lrpprc	91	73.261	Poecilia_latipinna
ENSORLG00020012536	lrpprc	99	73.243	ENSPMEG00000016425	lrpprc	91	73.416	Poecilia_mexicana
ENSORLG00020012536	lrpprc	99	73.147	ENSPREG00000003662	lrpprc	91	73.127	Poecilia_reticulata
ENSORLG00020012536	lrpprc	63	47.995	ENSPPYG00000029532	-	100	48.157	Pongo_abelii
ENSORLG00020012536	lrpprc	81	52.511	ENSPCAG00000001430	LRPPRC	76	54.230	Procavia_capensis
ENSORLG00020012536	lrpprc	99	48.806	ENSPVAG00000002007	LRPPRC	91	49.728	Pteropus_vampyrus
ENSORLG00020012536	lrpprc	99	67.801	ENSPNYG00000000756	lrpprc	93	68.373	Pundamilia_nyererei
ENSORLG00020012536	lrpprc	99	64.697	ENSPNAG00000002895	lrpprc	91	65.264	Pygocentrus_nattereri
ENSORLG00020012536	lrpprc	99	50.994	ENSRNOG00000005877	Lrpprc	92	51.705	Rattus_norvegicus
ENSORLG00020012536	lrpprc	99	50.158	ENSRBIG00000031552	LRPPRC	92	50.731	Rhinopithecus_bieti
ENSORLG00020012536	lrpprc	99	51.278	ENSSBOG00000011807	LRPPRC	91	51.823	Saimiri_boliviensis_boliviensis
ENSORLG00020012536	lrpprc	99	50.558	ENSSHAG00000018725	LRPPRC	95	51.006	Sarcophilus_harrisii
ENSORLG00020012536	lrpprc	98	55.371	ENSSFOG00015001042	lrpprc	90	55.936	Scleropages_formosus
ENSORLG00020012536	lrpprc	99	71.032	ENSSDUG00000019062	lrpprc	91	71.363	Seriola_dumerili
ENSORLG00020012536	lrpprc	99	57.744	ENSSLDG00000023028	lrpprc	93	58.739	Seriola_lalandi_dorsalis
ENSORLG00020012536	lrpprc	95	48.093	ENSSARG00000000426	LRPPRC	99	48.653	Sorex_araneus
ENSORLG00020012536	lrpprc	99	64.135	ENSSPAG00000000162	lrpprc	91	65.049	Stegastes_partitus
ENSORLG00020012536	lrpprc	99	52.226	ENSSSCG00000008452	LRPPRC	91	53.060	Sus_scrofa
ENSORLG00020012536	lrpprc	99	48.646	ENSTGUG00000003759	LRPPRC	97	48.571	Taeniopygia_guttata
ENSORLG00020012536	lrpprc	90	69.580	ENSTRUG00000008409	lrpprc	86	69.689	Takifugu_rubripes
ENSORLG00020012536	lrpprc	99	67.937	ENSTNIG00000007470	lrpprc	96	68.154	Tetraodon_nigroviridis
ENSORLG00020012536	lrpprc	99	50.636	ENSTTRG00000006403	LRPPRC	91	51.510	Tursiops_truncatus
ENSORLG00020012536	lrpprc	99	48.331	ENSVPAG00000008993	LRPPRC	95	49.302	Vicugna_pacos
ENSORLG00020012536	lrpprc	99	56.518	ENSXETG00000009296	lrpprc	92	57.728	Xenopus_tropicalis
ENSORLG00020012536	lrpprc	99	67.891	ENSXCOG00000013343	lrpprc	91	64.458	Xiphophorus_couchianus
ENSORLG00020012536	lrpprc	99	74.701	ENSXMAG00000018108	lrpprc	91	74.536	Xiphophorus_maculatus