EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020012607 (Gene tree)
Gene ID: -
Gene Symbol: SNRPC
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 6530 bases
Position: chr5:14436700-14443229
Accession: 101158847
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020011648	zf-U1	PF06220.12	1.2e-22	1	1
ENSORLP00020028888	zf-U1	PF06220.12	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020018599	-	2347	-	ENSORLP00020028888	151 (aa)	-	-
ENSORLT00020031867	-	1732	-	ENSORLP00020011648	147 (aa)	XP_020558907	H2LSU8

Gene Model

Click here to download ENSORLG00020012607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020012607's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020012607	SNRPC	97	96.503	ENSAPOG00000013907	snrpc	96	96.503	Acanthochromis_polyacanthus
ENSORLG00020012607	SNRPC	97	96.503	ENSAOCG00000021151	snrpc	96	96.503	Amphiprion_ocellaris
ENSORLG00020012607	SNRPC	97	96.503	ENSAPEG00000023221	snrpc	96	96.503	Amphiprion_percula
ENSORLG00020012607	SNRPC	97	96.503	ENSATEG00000025133	snrpc	96	96.503	Anabas_testudineus
ENSORLG00020012607	SNRPC	97	67.320	ENSANAG00000021026	-	59	66.667	Aotus_nancymaae
ENSORLG00020012607	SNRPC	58	80.000	ENSANAG00000019157	-	66	78.095	Aotus_nancymaae
ENSORLG00020012607	SNRPC	97	95.833	ENSACLG00000000843	snrpc	96	95.833	Astatotilapia_calliptera
ENSORLG00020012607	SNRPC	97	83.766	ENSAMXG00000032641	snrpc	64	77.083	Astyanax_mexicanus
ENSORLG00020012607	SNRPC	97	67.133	ENSTSYG00000025721	-	64	68.478	Carlito_syrichta
ENSORLG00020012607	SNRPC	53	78.409	ENSCAPG00000005161	SNRPC	62	78.409	Cavia_aperea
ENSORLG00020012607	SNRPC	65	68.571	ENSCHOG00000011439	SNRPC	58	68.932	Choloepus_hoffmanni
ENSORLG00020012607	SNRPC	86	52.756	ENSCING00000021229	ci-zf(matrin)-4	51	85.484	Ciona_intestinalis
ENSORLG00020012607	SNRPC	53	78.409	ENSCANG00000028035	SNRPC	51	76.136	Colobus_angolensis_palliatus
ENSORLG00020012607	SNRPC	65	64.151	ENSCGRG00001021483	-	63	69.474	Cricetulus_griseus_chok1gshd
ENSORLG00020012607	SNRPC	97	96.503	ENSCVAG00000014297	snrpc	96	96.503	Cyprinodon_variegatus
ENSORLG00020012607	SNRPC	73	100.000	ENSFHEG00000016667	snrpc	96	100.000	Fundulus_heteroclitus
ENSORLG00020012607	SNRPC	93	95.035	ENSGMOG00000000090	snrpc	96	95.035	Gadus_morhua
ENSORLG00020012607	SNRPC	97	96.503	ENSGAFG00000016115	snrpc	96	96.503	Gambusia_affinis
ENSORLG00020012607	SNRPC	96	95.745	ENSGACG00000004899	snrpc	96	93.750	Gasterosteus_aculeatus
ENSORLG00020012607	SNRPC	97	95.833	ENSHBUG00000011637	snrpc	96	95.833	Haplochromis_burtoni
ENSORLG00020012607	SNRPC	98	76.190	ENSHGLG00000017741	-	62	77.895	Heterocephalus_glaber_female
ENSORLG00020012607	SNRPC	98	76.190	ENSHGLG00100010786	-	62	77.895	Heterocephalus_glaber_male
ENSORLG00020012607	SNRPC	97	97.203	ENSKMAG00000016356	snrpc	96	97.203	Kryptolebias_marmoratus
ENSORLG00020012607	SNRPC	97	95.833	ENSLBEG00000023881	snrpc	96	95.833	Labrus_bergylta
ENSORLG00020012607	SNRPC	53	78.409	ENSMFAG00000031764	-	51	76.136	Macaca_fascicularis
ENSORLG00020012607	SNRPC	97	96.503	ENSMAMG00000003857	snrpc	96	96.503	Mastacembelus_armatus
ENSORLG00020012607	SNRPC	97	95.833	ENSMZEG00005002199	snrpc	96	95.833	Maylandia_zebra
ENSORLG00020012607	SNRPC	95	95.714	ENSMMOG00000013149	snrpc	96	95.714	Mola_mola
ENSORLG00020012607	SNRPC	97	94.406	ENSMALG00000001197	snrpc	57	98.810	Monopterus_albus
ENSORLG00020012607	SNRPC	53	77.273	ENSMUSG00000024217	Snrpc	56	77.273	Mus_musculus
ENSORLG00020012607	SNRPC	53	79.545	ENSMEUG00000009300	SNRPC	62	78.409	Notamacropus_eugenii
ENSORLG00020012607	SNRPC	97	95.833	ENSONIG00000014757	snrpc	96	95.833	Oreochromis_niloticus
ENSORLG00020012607	SNRPC	53	76.087	ENSOANG00000003405	SNRPC	62	75.000	Ornithorhynchus_anatinus
ENSORLG00020012607	SNRPC	100	99.338	ENSORLG00000007308	snrpc	100	99.320	Oryzias_latipes
ENSORLG00020012607	SNRPC	97	100.000	ENSOMEG00000012014	snrpc	82	100.000	Oryzias_melastigma
ENSORLG00020012607	SNRPC	95	93.571	ENSPMGG00000022162	snrpc	96	93.571	Periophthalmus_magnuspinnatus
ENSORLG00020012607	SNRPC	97	96.503	ENSPFOG00000015174	snrpc	96	96.503	Poecilia_formosa
ENSORLG00020012607	SNRPC	97	96.503	ENSPLAG00000012311	snrpc	96	96.503	Poecilia_latipinna
ENSORLG00020012607	SNRPC	97	96.503	ENSPMEG00000010274	snrpc	96	96.503	Poecilia_mexicana
ENSORLG00020012607	SNRPC	96	63.576	ENSSBOG00000032361	-	64	62.857	Saimiri_boliviensis_boliviensis
ENSORLG00020012607	SNRPC	97	96.503	ENSSMAG00000008029	snrpc	96	96.503	Scophthalmus_maximus
ENSORLG00020012607	SNRPC	97	96.503	ENSSDUG00000018895	snrpc	78	96.503	Seriola_dumerili
ENSORLG00020012607	SNRPC	97	96.503	ENSSLDG00000005034	snrpc	96	96.503	Seriola_lalandi_dorsalis
ENSORLG00020012607	SNRPC	97	96.503	ENSSPAG00000000914	snrpc	96	96.503	Stegastes_partitus
ENSORLG00020012607	SNRPC	97	80.420	ENSTRUG00000021651	snrpc	57	98.810	Takifugu_rubripes
ENSORLG00020012607	SNRPC	97	96.503	ENSXMAG00000017935	snrpc	96	96.503	Xiphophorus_maculatus