EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020012672 (Gene tree)
Gene ID: -
Gene Symbol: ern2
Alias: -
Full Name: endoplasmic reticulum to nucleus signaling 2
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 12800 bases
Position: chr1:20433843-20446642
Accession: ZDB-GENE-090312-15
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020028845	Ribonuc_2-5A	PF06479.12	9.1e-41	1	1
ENSORLP00020028866	Ribonuc_2-5A	PF06479.12	9.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020018580	-	7570	-	ENSORLP00020028866	963 (aa)	-	-
ENSORLT00020018540	-	2880	-	ENSORLP00020028845	959 (aa)	-	-

Gene Model

Click here to download ENSORLG00020012672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020012672's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020012672	ern2	99	55.864	ENSORLG00020018387	ern1	87	55.983

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020012672	ern2	99	83.007	ENSAPOG00000002325	ern2	99	83.010	Acanthochromis_polyacanthus
ENSORLG00020012672	ern2	98	80.382	ENSACIG00000015500	ern2	98	79.916	Amphilophus_citrinellus
ENSORLG00020012672	ern2	99	83.507	ENSAOCG00000001933	ern2	98	83.507	Amphiprion_ocellaris
ENSORLG00020012672	ern2	99	83.820	ENSAPEG00000000821	ern2	98	83.820	Amphiprion_percula
ENSORLG00020012672	ern2	100	81.696	ENSATEG00000008597	ern2	98	82.162	Anabas_testudineus
ENSORLG00020012672	ern2	100	81.977	ENSACLG00000000966	ern2	99	81.977	Astatotilapia_calliptera
ENSORLG00020012672	ern2	97	69.149	ENSAMXG00000018368	ern2	98	69.043	Astyanax_mexicanus
ENSORLG00020012672	ern2	98	79.412	ENSCSEG00000020936	ern2	97	79.289	Cynoglossus_semilaevis
ENSORLG00020012672	ern2	98	79.853	ENSCVAG00000015538	ern2	98	79.560	Cyprinodon_variegatus
ENSORLG00020012672	ern2	90	79.302	ENSDARG00000058475	ern2	95	79.302	Danio_rerio
ENSORLG00020012672	ern2	89	75.309	ENSELUG00000009350	ern2	91	75.309	Esox_lucius
ENSORLG00020012672	ern2	98	81.361	ENSFHEG00000002578	ern2	98	81.361	Fundulus_heteroclitus
ENSORLG00020012672	ern2	77	83.954	ENSGMOG00000006029	ern2	82	83.954	Gadus_morhua
ENSORLG00020012672	ern2	97	80.426	ENSGACG00000016726	ern2	94	80.426	Gasterosteus_aculeatus
ENSORLG00020012672	ern2	100	81.874	ENSHBUG00000019242	ern2	100	81.943	Haplochromis_burtoni
ENSORLG00020012672	ern2	99	69.013	ENSHCOG00000020503	ern2	98	68.796	Hippocampus_comes
ENSORLG00020012672	ern2	92	66.442	ENSIPUG00000001249	ern2	95	66.442	Ictalurus_punctatus
ENSORLG00020012672	ern2	100	80.145	ENSKMAG00000007537	ern2	98	80.547	Kryptolebias_marmoratus
ENSORLG00020012672	ern2	99	82.531	ENSLBEG00000005440	ern2	98	82.636	Labrus_bergylta
ENSORLG00020012672	ern2	97	61.595	ENSLACG00000011540	ern2	97	61.307	Latimeria_chalumnae
ENSORLG00020012672	ern2	99	80.457	ENSMAMG00000008619	ern2	99	80.457	Mastacembelus_armatus
ENSORLG00020012672	ern2	100	81.977	ENSMZEG00005011884	ern2	99	81.977	Maylandia_zebra
ENSORLG00020012672	ern2	99	79.814	ENSMMOG00000003643	ern2	98	79.958	Mola_mola
ENSORLG00020012672	ern2	99	78.920	ENSMALG00000002568	ern2	98	79.335	Monopterus_albus
ENSORLG00020012672	ern2	97	80.871	ENSONIG00000003276	ern2	98	81.615	Oreochromis_niloticus
ENSORLG00020012672	ern2	100	99.169	ENSORLG00000008924	ERN2	100	99.193	Oryzias_latipes
ENSORLG00020012672	ern2	100	98.546	ENSORLG00015011995	ern2	100	98.546	Oryzias_latipes_hsok
ENSORLG00020012672	ern2	98	93.882	ENSOMEG00000022267	ern2	100	93.769	Oryzias_melastigma
ENSORLG00020012672	ern2	98	70.074	ENSPKIG00000013181	ern2	95	69.758	Paramormyrops_kingsleyae
ENSORLG00020012672	ern2	77	86.783	ENSPMGG00000016482	ern2	81	86.783	Periophthalmus_magnuspinnatus
ENSORLG00020012672	ern2	90	78.057	ENSPFOG00000006600	-	100	78.171	Poecilia_formosa
ENSORLG00020012672	ern2	69	75.038	ENSPLAG00000018226	-	97	88.614	Poecilia_latipinna
ENSORLG00020012672	ern2	67	74.847	ENSPMEG00000004696	-	100	75.000	Poecilia_mexicana
ENSORLG00020012672	ern2	100	81.874	ENSPNYG00000014961	ern2	99	81.874	Pundamilia_nyererei
ENSORLG00020012672	ern2	97	69.394	ENSPNAG00000014531	ern2	97	69.501	Pygocentrus_nattereri
ENSORLG00020012672	ern2	90	82.286	ENSSMAG00000021268	ern2	100	82.286	Scophthalmus_maximus
ENSORLG00020012672	ern2	100	83.162	ENSSDUG00000016726	ern2	99	83.162	Seriola_dumerili
ENSORLG00020012672	ern2	100	82.904	ENSSLDG00000022830	ern2	99	82.904	Seriola_lalandi_dorsalis
ENSORLG00020012672	ern2	83	81.436	ENSSPAG00000013487	ern2	91	81.436	Stegastes_partitus
ENSORLG00020012672	ern2	99	77.971	ENSTRUG00000011288	ern2	98	78.031	Takifugu_rubripes
ENSORLG00020012672	ern2	98	55.648	ENSXETG00000010337	ern2	98	56.118	Xenopus_tropicalis
ENSORLG00020012672	ern2	77	87.376	ENSXCOG00000009393	ern2	97	87.376	Xiphophorus_couchianus
ENSORLG00020012672	ern2	100	78.064	ENSXMAG00000006362	-	99	78.167	Xiphophorus_maculatus