EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020012685 (Gene tree)
Gene ID: -
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 6676 bases
Position: chr21:7777380-7784055
Accession: 101162878
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020011757	MMR_HSR1	PF01926.23	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020018717	-	1530	XM_004081461	ENSORLP00020011757	233 (aa)	XP_004081509	-

Gene Model

Click here to download ENSORLG00020012685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020012685's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020012685	zgc:101559	74	33.140	ENSORLG00020013690	zgc:55558	96	33.696
ENSORLG00020012685	zgc:101559	76	35.795	ENSORLG00020008129	hras	96	36.170
ENSORLG00020012685	zgc:101559	82	41.579	ENSORLG00020000867	si:dkey-16l2.16	85	41.579
ENSORLG00020012685	zgc:101559	63	41.176	ENSORLG00020019465	si:dkey-13a21.4	73	41.176
ENSORLG00020012685	zgc:101559	80	40.314	ENSORLG00020005131	rab12	77	40.314
ENSORLG00020012685	zgc:101559	84	48.148	ENSORLG00020013870	-	90	47.926
ENSORLG00020012685	zgc:101559	82	36.598	ENSORLG00020010041	rab34a	71	36.598
ENSORLG00020012685	zgc:101559	89	42.995	ENSORLG00020021071	zgc:171927	89	42.995
ENSORLG00020012685	zgc:101559	67	45.912	ENSORLG00020019269	RAB39B	74	45.912
ENSORLG00020012685	zgc:101559	79	38.298	ENSORLG00020013719	rab25b	93	37.838
ENSORLG00020012685	zgc:101559	99	57.511	ENSORLG00020020266	rab33a	84	57.511
ENSORLG00020012685	zgc:101559	66	42.208	ENSORLG00020020035	rab2a	72	42.208
ENSORLG00020012685	zgc:101559	72	35.329	ENSORLG00020020961	kras	96	35.227
ENSORLG00020012685	zgc:101559	78	44.751	ENSORLG00020000892	rab1ab	84	44.751
ENSORLG00020012685	zgc:101559	65	36.538	ENSORLG00020008512	-	77	36.538
ENSORLG00020012685	zgc:101559	63	40.816	ENSORLG00020004905	RAB15	70	40.816
ENSORLG00020012685	zgc:101559	74	37.572	ENSORLG00020013747	rab11al	79	37.572
ENSORLG00020012685	zgc:101559	74	39.884	ENSORLG00020019393	rab11bb	78	39.884
ENSORLG00020012685	zgc:101559	73	39.181	ENSORLG00020008388	rab5c	76	39.181
ENSORLG00020012685	zgc:101559	63	36.486	ENSORLG00020005150	rhebl1	79	36.486
ENSORLG00020012685	zgc:101559	53	34.959	ENSORLG00020011620	rras2	70	34.959
ENSORLG00020012685	zgc:101559	63	38.514	ENSORLG00020010114	-	79	38.514
ENSORLG00020012685	zgc:101559	63	33.333	ENSORLG00020006790	dnajc27	55	33.333
ENSORLG00020012685	zgc:101559	80	40.426	ENSORLG00020009535	-	89	40.426
ENSORLG00020012685	zgc:101559	85	36.634	ENSORLG00020020811	rab25a	66	36.634
ENSORLG00020012685	zgc:101559	80	65.464	ENSORLG00020018196	rab33ba	83	65.464
ENSORLG00020012685	zgc:101559	50	36.752	ENSORLG00020001721	rabl2	50	36.752
ENSORLG00020012685	zgc:101559	69	37.500	ENSORLG00020010772	rab6ba	77	37.500
ENSORLG00020012685	zgc:101559	63	37.162	ENSORLG00020002801	rheb	79	37.162
ENSORLG00020012685	zgc:101559	66	38.961	ENSORLG00020021663	rab3db	69	38.961
ENSORLG00020012685	zgc:101559	63	40.541	ENSORLG00020020277	si:dkey-34d22.5	67	40.541
ENSORLG00020012685	zgc:101559	80	37.634	ENSORLG00020013337	rab6bb	87	37.634
ENSORLG00020012685	zgc:101559	84	37.056	ENSORLG00020018259	rab15	90	37.056
ENSORLG00020012685	zgc:101559	72	49.701	ENSORLG00020015288	rab30	80	49.701
ENSORLG00020012685	zgc:101559	65	37.821	ENSORLG00020009158	rab9b	73	37.821
ENSORLG00020012685	zgc:101559	63	40.816	ENSORLG00020011590	rab18b	71	40.816
ENSORLG00020012685	zgc:101559	74	38.728	ENSORLG00020020816	rab11ba	78	38.728
ENSORLG00020012685	zgc:101559	70	35.088	ENSORLG00020018922	rasl11a	67	35.088
ENSORLG00020012685	zgc:101559	52	32.824	ENSORLG00020008991	rabl3	57	32.824
ENSORLG00020012685	zgc:101559	63	42.177	ENSORLG00020008333	rab18a	93	36.923
ENSORLG00020012685	zgc:101559	62	33.784	ENSORLG00020005258	rerg	71	33.784
ENSORLG00020012685	zgc:101559	70	36.970	ENSORLG00020020220	rab23	71	39.189
ENSORLG00020012685	zgc:101559	74	39.306	ENSORLG00020020844	RAB11B	78	39.306
ENSORLG00020012685	zgc:101559	69	40.994	ENSORLG00020001816	rab6a	80	40.994
ENSORLG00020012685	zgc:101559	80	37.234	ENSORLG00020016139	rab34b	67	37.234
ENSORLG00020012685	zgc:101559	69	33.540	ENSORLG00020012306	si:ch73-116o1.2	81	34.682
ENSORLG00020012685	zgc:101559	64	42.667	ENSORLG00020000604	rab41	70	42.667
ENSORLG00020012685	zgc:101559	73	40.936	ENSORLG00020020922	rab5aa	77	40.936
ENSORLG00020012685	zgc:101559	66	40.909	ENSORLG00020013895	rab42a	70	40.909
ENSORLG00020012685	zgc:101559	85	35.468	ENSORLG00020018986	rab14	74	39.521
ENSORLG00020012685	zgc:101559	86	41.791	ENSORLG00020021697	-	92	41.791
ENSORLG00020012685	zgc:101559	67	34.810	ENSORLG00020000483	rab9a	78	34.810
ENSORLG00020012685	zgc:101559	83	35.385	ENSORLG00020015717	-	78	35.385
ENSORLG00020012685	zgc:101559	70	40.237	ENSORLG00020005952	rab7a	79	40.237
ENSORLG00020012685	zgc:101559	64	35.294	ENSORLG00020005240	RAB29	75	35.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020012685	zgc:101559	100	82.051	ENSAPOG00000007503	zgc:101559	100	82.051	Acanthochromis_polyacanthus
ENSORLG00020012685	zgc:101559	87	86.207	ENSACIG00000021459	zgc:101559	89	86.207	Amphilophus_citrinellus
ENSORLG00020012685	zgc:101559	100	82.051	ENSAOCG00000024675	zgc:101559	100	82.051	Amphiprion_ocellaris
ENSORLG00020012685	zgc:101559	100	82.051	ENSAPEG00000005176	zgc:101559	100	82.051	Amphiprion_percula
ENSORLG00020012685	zgc:101559	100	80.342	ENSATEG00000007761	zgc:101559	100	80.342	Anabas_testudineus
ENSORLG00020012685	zgc:101559	97	83.333	ENSACLG00000027006	zgc:101559	97	83.333	Astatotilapia_calliptera
ENSORLG00020012685	zgc:101559	100	74.359	ENSAMXG00000040460	zgc:101559	94	74.359	Astyanax_mexicanus
ENSORLG00020012685	zgc:101559	100	79.060	ENSCSEG00000006243	zgc:101559	100	79.060	Cynoglossus_semilaevis
ENSORLG00020012685	zgc:101559	100	82.906	ENSCVAG00000019227	zgc:101559	100	82.906	Cyprinodon_variegatus
ENSORLG00020012685	zgc:101559	100	71.795	ENSDARG00000003257	zgc:101559	100	71.795	Danio_rerio
ENSORLG00020012685	zgc:101559	100	81.624	ENSFHEG00000011483	zgc:101559	100	81.624	Fundulus_heteroclitus
ENSORLG00020012685	zgc:101559	91	78.302	ENSGMOG00000011665	zgc:101559	99	78.302	Gadus_morhua
ENSORLG00020012685	zgc:101559	100	82.051	ENSGAFG00000021202	zgc:101559	100	82.051	Gambusia_affinis
ENSORLG00020012685	zgc:101559	91	79.717	ENSGACG00000001725	zgc:101559	91	79.717	Gasterosteus_aculeatus
ENSORLG00020012685	zgc:101559	100	82.479	ENSHBUG00000007827	zgc:101559	100	82.479	Haplochromis_burtoni
ENSORLG00020012685	zgc:101559	100	74.576	ENSHCOG00000009133	zgc:101559	100	75.630	Hippocampus_comes
ENSORLG00020012685	zgc:101559	100	69.099	ENSIPUG00000022394	zgc:101559	100	69.099	Ictalurus_punctatus
ENSORLG00020012685	zgc:101559	100	77.447	ENSKMAG00000002862	zgc:101559	100	77.447	Kryptolebias_marmoratus
ENSORLG00020012685	zgc:101559	100	82.906	ENSLBEG00000025798	zgc:101559	100	82.906	Labrus_bergylta
ENSORLG00020012685	zgc:101559	85	68.500	ENSLACG00000011557	zgc:101559	87	68.500	Latimeria_chalumnae
ENSORLG00020012685	zgc:101559	100	68.670	ENSLOCG00000005904	zgc:101559	99	68.670	Lepisosteus_oculatus
ENSORLG00020012685	zgc:101559	100	80.769	ENSMAMG00000017431	zgc:101559	100	80.769	Mastacembelus_armatus
ENSORLG00020012685	zgc:101559	100	82.479	ENSMZEG00005021778	zgc:101559	100	82.479	Maylandia_zebra
ENSORLG00020012685	zgc:101559	100	78.205	ENSMMOG00000019779	zgc:101559	100	78.205	Mola_mola
ENSORLG00020012685	zgc:101559	100	79.060	ENSMALG00000003712	zgc:101559	100	79.060	Monopterus_albus
ENSORLG00020012685	zgc:101559	100	82.051	ENSNBRG00000002684	zgc:101559	100	82.051	Neolamprologus_brichardi
ENSORLG00020012685	zgc:101559	100	82.479	ENSONIG00000006715	-	100	82.479	Oreochromis_niloticus
ENSORLG00020012685	zgc:101559	100	99.142	ENSORLG00000030642	zgc:101559	100	99.142	Oryzias_latipes
ENSORLG00020012685	zgc:101559	100	98.712	ENSORLG00015016047	zgc:101559	100	98.712	Oryzias_latipes_hsok
ENSORLG00020012685	zgc:101559	100	93.133	ENSOMEG00000013128	zgc:101559	100	93.133	Oryzias_melastigma
ENSORLG00020012685	zgc:101559	86	75.248	ENSPKIG00000013397	zgc:101559	85	75.248	Paramormyrops_kingsleyae
ENSORLG00020012685	zgc:101559	100	82.479	ENSPFOG00000009101	-	100	82.479	Poecilia_formosa
ENSORLG00020012685	zgc:101559	100	82.479	ENSPLAG00000020627	zgc:101559	100	82.479	Poecilia_latipinna
ENSORLG00020012685	zgc:101559	100	82.479	ENSPMEG00000010152	zgc:101559	100	82.479	Poecilia_mexicana
ENSORLG00020012685	zgc:101559	100	82.051	ENSPREG00000007017	zgc:101559	100	82.051	Poecilia_reticulata
ENSORLG00020012685	zgc:101559	100	82.479	ENSPNYG00000012922	zgc:101559	100	82.479	Pundamilia_nyererei
ENSORLG00020012685	zgc:101559	100	73.077	ENSPNAG00000017856	zgc:101559	100	73.077	Pygocentrus_nattereri
ENSORLG00020012685	zgc:101559	100	69.362	ENSSFOG00015006175	zgc:101559	100	69.362	Scleropages_formosus
ENSORLG00020012685	zgc:101559	99	78.448	ENSSMAG00000002229	zgc:101559	98	78.448	Scophthalmus_maximus
ENSORLG00020012685	zgc:101559	100	83.761	ENSSDUG00000008151	zgc:101559	100	83.761	Seriola_dumerili
ENSORLG00020012685	zgc:101559	100	83.333	ENSSLDG00000019214	zgc:101559	100	83.333	Seriola_lalandi_dorsalis
ENSORLG00020012685	zgc:101559	100	82.906	ENSSPAG00000006404	zgc:101559	100	82.906	Stegastes_partitus
ENSORLG00020012685	zgc:101559	100	78.632	ENSTRUG00000009903	zgc:101559	100	78.632	Takifugu_rubripes
ENSORLG00020012685	zgc:101559	93	78.440	ENSTNIG00000015000	zgc:101559	100	74.153	Tetraodon_nigroviridis
ENSORLG00020012685	zgc:101559	100	82.479	ENSXCOG00000018683	zgc:101559	100	82.479	Xiphophorus_couchianus
ENSORLG00020012685	zgc:101559	100	83.333	ENSXMAG00000011171	zgc:101559	100	83.333	Xiphophorus_maculatus