EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020012792 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 51633 bases
Position: chr15:14503723-14555355
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020011847	S1	PF00575.23	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020031952	-	6208	-	ENSORLP00020011847	1020 (aa)	-	-

Gene Model

Click here to download ENSORLG00020012792's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020012792's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020012792	si:ch211-117n7.8	84	56.766	ENSG00000068784	SRBD1	99	50.476	Homo_sapiens
ENSORLG00020012792	si:ch211-117n7.8	100	76.631	ENSAPOG00000005103	si:ch211-117n7.8	100	76.534	Acanthochromis_polyacanthus
ENSORLG00020012792	si:ch211-117n7.8	96	52.152	ENSAMEG00000005993	SRBD1	99	51.163	Ailuropoda_melanoleuca
ENSORLG00020012792	si:ch211-117n7.8	97	76.838	ENSACIG00000009875	si:ch211-117n7.8	100	76.838	Amphilophus_citrinellus
ENSORLG00020012792	si:ch211-117n7.8	100	75.855	ENSAOCG00000024718	si:ch211-117n7.8	100	75.758	Amphiprion_ocellaris
ENSORLG00020012792	si:ch211-117n7.8	97	76.660	ENSAPEG00000002645	si:ch211-117n7.8	100	76.559	Amphiprion_percula
ENSORLG00020012792	si:ch211-117n7.8	100	73.854	ENSATEG00000010844	si:ch211-117n7.8	100	74.146	Anabas_testudineus
ENSORLG00020012792	si:ch211-117n7.8	93	54.713	ENSAPLG00000006313	SRBD1	96	54.816	Anas_platyrhynchos
ENSORLG00020012792	si:ch211-117n7.8	82	56.941	ENSANAG00000025573	SRBD1	99	50.097	Aotus_nancymaae
ENSORLG00020012792	si:ch211-117n7.8	100	76.534	ENSACLG00000024219	si:ch211-117n7.8	100	77.507	Astatotilapia_calliptera
ENSORLG00020012792	si:ch211-117n7.8	100	61.680	ENSAMXG00000004294	SRBD1	100	62.561	Astyanax_mexicanus
ENSORLG00020012792	si:ch211-117n7.8	84	56.307	ENSBTAG00000007508	SRBD1	97	50.050	Bos_taurus
ENSORLG00020012792	si:ch211-117n7.8	99	50.291	ENSCJAG00000000727	SRBD1	99	50.000	Callithrix_jacchus
ENSORLG00020012792	si:ch211-117n7.8	83	56.628	ENSCAFG00000002554	SRBD1	99	50.723	Canis_familiaris
ENSORLG00020012792	si:ch211-117n7.8	83	57.396	ENSCAFG00020026284	SRBD1	98	57.160	Canis_lupus_dingo
ENSORLG00020012792	si:ch211-117n7.8	82	57.647	ENSCHIG00000016535	SRBD1	98	50.676	Capra_hircus
ENSORLG00020012792	si:ch211-117n7.8	84	56.000	ENSTSYG00000012797	SRBD1	99	49.952	Carlito_syrichta
ENSORLG00020012792	si:ch211-117n7.8	84	56.628	ENSCPOG00000004773	SRBD1	86	56.345	Cavia_porcellus
ENSORLG00020012792	si:ch211-117n7.8	97	51.940	ENSCCAG00000025589	SRBD1	99	51.255	Cebus_capucinus
ENSORLG00020012792	si:ch211-117n7.8	84	56.537	ENSCATG00000039530	SRBD1	98	51.717	Cercocebus_atys
ENSORLG00020012792	si:ch211-117n7.8	84	57.326	ENSCLAG00000008623	SRBD1	85	57.159	Chinchilla_lanigera
ENSORLG00020012792	si:ch211-117n7.8	97	51.287	ENSCSAG00000013350	SRBD1	98	50.829	Chlorocebus_sabaeus
ENSORLG00020012792	si:ch211-117n7.8	72	67.347	ENSCHOG00000003805	SRBD1	71	67.347	Choloepus_hoffmanni
ENSORLG00020012792	si:ch211-117n7.8	94	53.080	ENSCPBG00000005677	SRBD1	98	52.522	Chrysemys_picta_bellii
ENSORLG00020012792	si:ch211-117n7.8	77	40.323	ENSCING00000005950	-	99	40.274	Ciona_intestinalis
ENSORLG00020012792	si:ch211-117n7.8	77	40.834	ENSCSAVG00000000861	-	99	40.834	Ciona_savignyi
ENSORLG00020012792	si:ch211-117n7.8	97	51.940	ENSCANG00000016307	SRBD1	99	50.867	Colobus_angolensis_palliatus
ENSORLG00020012792	si:ch211-117n7.8	84	56.845	ENSCGRG00001000513	Srbd1	85	56.628	Cricetulus_griseus_chok1gshd
ENSORLG00020012792	si:ch211-117n7.8	84	56.845	ENSCGRG00000002283	Srbd1	85	56.628	Cricetulus_griseus_crigri
ENSORLG00020012792	si:ch211-117n7.8	100	68.744	ENSCSEG00000000856	si:ch211-117n7.8	100	68.841	Cynoglossus_semilaevis
ENSORLG00020012792	si:ch211-117n7.8	85	80.571	ENSCVAG00000020212	si:ch211-117n7.8	99	73.220	Cyprinodon_variegatus
ENSORLG00020012792	si:ch211-117n7.8	84	55.986	ENSDNOG00000018686	SRBD1	85	55.302	Dasypus_novemcinctus
ENSORLG00020012792	si:ch211-117n7.8	99	50.339	ENSDORG00000010468	Srbd1	99	50.194	Dipodomys_ordii
ENSORLG00020012792	si:ch211-117n7.8	77	35.346	FBgn0051156	CG31156	79	35.840	Drosophila_melanogaster
ENSORLG00020012792	si:ch211-117n7.8	88	56.204	ENSETEG00000000739	SRBD1	91	56.182	Echinops_telfairi
ENSORLG00020012792	si:ch211-117n7.8	71	47.737	ENSEBUG00000008902	si:ch211-117n7.8	95	47.808	Eptatretus_burgeri
ENSORLG00020012792	si:ch211-117n7.8	84	54.181	ENSEASG00005003132	SRBD1	100	54.321	Equus_asinus_asinus
ENSORLG00020012792	si:ch211-117n7.8	84	56.357	ENSECAG00000013865	SRBD1	98	50.668	Equus_caballus
ENSORLG00020012792	si:ch211-117n7.8	99	62.833	ENSELUG00000012592	si:ch211-117n7.8	99	63.706	Esox_lucius
ENSORLG00020012792	si:ch211-117n7.8	84	56.357	ENSFCAG00000005101	SRBD1	99	50.386	Felis_catus
ENSORLG00020012792	si:ch211-117n7.8	82	57.651	ENSFALG00000012966	SRBD1	97	51.804	Ficedula_albicollis
ENSORLG00020012792	si:ch211-117n7.8	84	56.977	ENSFDAG00000016670	SRBD1	87	56.944	Fukomys_damarensis
ENSORLG00020012792	si:ch211-117n7.8	100	75.875	ENSFHEG00000019480	si:ch211-117n7.8	100	75.875	Fundulus_heteroclitus
ENSORLG00020012792	si:ch211-117n7.8	83	58.353	ENSGALG00000009990	SRBD1	96	53.902	Gallus_gallus
ENSORLG00020012792	si:ch211-117n7.8	100	75.855	ENSGAFG00000019664	si:ch211-117n7.8	100	75.953	Gambusia_affinis
ENSORLG00020012792	si:ch211-117n7.8	61	78.538	ENSGACG00000010794	si:ch211-117n7.8	100	78.694	Gasterosteus_aculeatus
ENSORLG00020012792	si:ch211-117n7.8	82	58.588	ENSGAGG00000006166	SRBD1	99	58.588	Gopherus_agassizii
ENSORLG00020012792	si:ch211-117n7.8	84	56.766	ENSGGOG00000005910	SRBD1	87	56.537	Gorilla_gorilla
ENSORLG00020012792	si:ch211-117n7.8	97	64.753	ENSHBUG00000013207	si:ch211-117n7.8	100	65.055	Haplochromis_burtoni
ENSORLG00020012792	si:ch211-117n7.8	92	53.340	ENSHGLG00000018153	-	96	53.236	Heterocephalus_glaber_female
ENSORLG00020012792	si:ch211-117n7.8	92	53.236	ENSHGLG00100015183	-	96	53.236	Heterocephalus_glaber_male
ENSORLG00020012792	si:ch211-117n7.8	87	67.156	ENSIPUG00000009661	srbd1	100	62.329	Ictalurus_punctatus
ENSORLG00020012792	si:ch211-117n7.8	84	57.523	ENSSTOG00000005898	SRBD1	85	56.895	Ictidomys_tridecemlineatus
ENSORLG00020012792	si:ch211-117n7.8	97	49.850	ENSJJAG00000022244	Srbd1	97	49.600	Jaculus_jaculus
ENSORLG00020012792	si:ch211-117n7.8	99	76.494	ENSKMAG00000003473	si:ch211-117n7.8	100	76.494	Kryptolebias_marmoratus
ENSORLG00020012792	si:ch211-117n7.8	100	75.731	ENSLBEG00000027518	si:ch211-117n7.8	100	75.731	Labrus_bergylta
ENSORLG00020012792	si:ch211-117n7.8	82	59.155	ENSLACG00000009790	SRBD1	98	59.155	Latimeria_chalumnae
ENSORLG00020012792	si:ch211-117n7.8	92	63.407	ENSLOCG00000016360	si:ch211-117n7.8	99	60.193	Lepisosteus_oculatus
ENSORLG00020012792	si:ch211-117n7.8	84	56.537	ENSMFAG00000042026	SRBD1	85	56.307	Macaca_fascicularis
ENSORLG00020012792	si:ch211-117n7.8	84	56.537	ENSMMUG00000003490	SRBD1	98	51.721	Macaca_mulatta
ENSORLG00020012792	si:ch211-117n7.8	84	54.931	ENSMNEG00000034701	SRBD1	85	54.702	Macaca_nemestrina
ENSORLG00020012792	si:ch211-117n7.8	84	56.651	ENSMLEG00000000745	SRBD1	85	56.422	Mandrillus_leucophaeus
ENSORLG00020012792	si:ch211-117n7.8	100	73.633	ENSMAMG00000021921	si:ch211-117n7.8	100	74.219	Mastacembelus_armatus
ENSORLG00020012792	si:ch211-117n7.8	100	77.605	ENSMZEG00005027369	si:ch211-117n7.8	100	77.605	Maylandia_zebra
ENSORLG00020012792	si:ch211-117n7.8	78	56.188	ENSMGAG00000010273	SRBD1	99	56.064	Meleagris_gallopavo
ENSORLG00020012792	si:ch211-117n7.8	76	56.404	ENSMAUG00000013916	Srbd1	95	56.489	Mesocricetus_auratus
ENSORLG00020012792	si:ch211-117n7.8	84	57.274	ENSMICG00000007835	SRBD1	99	51.161	Microcebus_murinus
ENSORLG00020012792	si:ch211-117n7.8	98	51.277	ENSMOCG00000018716	Srbd1	98	51.133	Microtus_ochrogaster
ENSORLG00020012792	si:ch211-117n7.8	97	72.048	ENSMMOG00000007507	si:ch211-117n7.8	100	71.847	Mola_mola
ENSORLG00020012792	si:ch211-117n7.8	100	74.052	ENSMALG00000001562	si:ch211-117n7.8	100	74.441	Monopterus_albus
ENSORLG00020012792	si:ch211-117n7.8	84	55.828	MGP_CAROLIEiJ_G0021934	Srbd1	99	58.224	Mus_caroli
ENSORLG00020012792	si:ch211-117n7.8	83	56.163	ENSMUSG00000024135	Srbd1	96	56.827	Mus_musculus
ENSORLG00020012792	si:ch211-117n7.8	97	50.495	MGP_PahariEiJ_G0020924	Srbd1	98	50.495	Mus_pahari
ENSORLG00020012792	si:ch211-117n7.8	84	56.098	MGP_SPRETEiJ_G0022850	Srbd1	85	55.981	Mus_spretus
ENSORLG00020012792	si:ch211-117n7.8	84	56.293	ENSMLUG00000007039	SRBD1	99	50.144	Myotis_lucifugus
ENSORLG00020012792	si:ch211-117n7.8	97	50.290	ENSNGAG00000011893	Srbd1	98	50.097	Nannospalax_galili
ENSORLG00020012792	si:ch211-117n7.8	98	74.200	ENSNBRG00000012873	si:ch211-117n7.8	100	74.200	Neolamprologus_brichardi
ENSORLG00020012792	si:ch211-117n7.8	84	56.537	ENSNLEG00000016877	SRBD1	85	56.307	Nomascus_leucogenys
ENSORLG00020012792	si:ch211-117n7.8	84	55.800	ENSODEG00000012095	SRBD1	86	55.930	Octodon_degus
ENSORLG00020012792	si:ch211-117n7.8	100	77.799	ENSONIG00000000945	si:ch211-117n7.8	100	82.256	Oreochromis_niloticus
ENSORLG00020012792	si:ch211-117n7.8	93	52.070	ENSOCUG00000015385	SRBD1	99	50.339	Oryctolagus_cuniculus
ENSORLG00020012792	si:ch211-117n7.8	100	95.196	ENSORLG00000004427	si:ch211-117n7.8	100	95.196	Oryzias_latipes
ENSORLG00020012792	si:ch211-117n7.8	100	98.529	ENSORLG00015018598	si:ch211-117n7.8	100	98.529	Oryzias_latipes_hsok
ENSORLG00020012792	si:ch211-117n7.8	99	87.807	ENSOMEG00000012229	si:ch211-117n7.8	99	89.773	Oryzias_melastigma
ENSORLG00020012792	si:ch211-117n7.8	82	54.982	ENSOGAG00000001076	SRBD1	98	49.752	Otolemur_garnettii
ENSORLG00020012792	si:ch211-117n7.8	99	47.996	ENSOARG00000005958	SRBD1	99	48.086	Ovis_aries
ENSORLG00020012792	si:ch211-117n7.8	82	57.176	ENSPPAG00000038442	SRBD1	99	50.286	Pan_paniscus
ENSORLG00020012792	si:ch211-117n7.8	84	56.307	ENSPPRG00000003449	SRBD1	99	50.771	Panthera_pardus
ENSORLG00020012792	si:ch211-117n7.8	84	56.307	ENSPTIG00000012495	SRBD1	99	50.720	Panthera_tigris_altaica
ENSORLG00020012792	si:ch211-117n7.8	82	57.294	ENSPTRG00000011889	SRBD1	99	50.476	Pan_troglodytes
ENSORLG00020012792	si:ch211-117n7.8	84	56.537	ENSPANG00000008063	SRBD1	85	56.307	Papio_anubis
ENSORLG00020012792	si:ch211-117n7.8	93	64.823	ENSPKIG00000021973	si:ch211-117n7.8	99	61.951	Paramormyrops_kingsleyae
ENSORLG00020012792	si:ch211-117n7.8	83	57.209	ENSPSIG00000008992	SRBD1	99	51.731	Pelodiscus_sinensis
ENSORLG00020012792	si:ch211-117n7.8	98	67.768	ENSPMGG00000013348	si:ch211-117n7.8	99	69.100	Periophthalmus_magnuspinnatus
ENSORLG00020012792	si:ch211-117n7.8	98	50.973	ENSPEMG00000020684	Srbd1	98	50.486	Peromyscus_maniculatus_bairdii
ENSORLG00020012792	si:ch211-117n7.8	100	76.637	ENSPFOG00000010650	si:ch211-117n7.8	100	76.637	Poecilia_formosa
ENSORLG00020012792	si:ch211-117n7.8	100	76.735	ENSPLAG00000002141	si:ch211-117n7.8	100	76.735	Poecilia_latipinna
ENSORLG00020012792	si:ch211-117n7.8	100	76.833	ENSPMEG00000018537	si:ch211-117n7.8	100	76.833	Poecilia_mexicana
ENSORLG00020012792	si:ch211-117n7.8	100	74.269	ENSPREG00000003258	si:ch211-117n7.8	100	74.074	Poecilia_reticulata
ENSORLG00020012792	si:ch211-117n7.8	84	52.468	ENSPPYG00000012444	SRBD1	85	52.039	Pongo_abelii
ENSORLG00020012792	si:ch211-117n7.8	74	51.979	ENSPCAG00000005629	SRBD1	80	51.847	Procavia_capensis
ENSORLG00020012792	si:ch211-117n7.8	84	48.292	ENSPCOG00000017669	SRBD1	84	48.064	Propithecus_coquereli
ENSORLG00020012792	si:ch211-117n7.8	84	49.035	ENSPVAG00000001782	SRBD1	99	44.519	Pteropus_vampyrus
ENSORLG00020012792	si:ch211-117n7.8	97	72.020	ENSPNYG00000000508	si:ch211-117n7.8	99	72.020	Pundamilia_nyererei
ENSORLG00020012792	si:ch211-117n7.8	94	65.424	ENSPNAG00000013492	SRBD1	100	63.060	Pygocentrus_nattereri
ENSORLG00020012792	si:ch211-117n7.8	84	55.297	ENSRNOG00000014720	Srbd1	85	55.413	Rattus_norvegicus
ENSORLG00020012792	si:ch211-117n7.8	81	57.109	ENSRBIG00000033486	SRBD1	83	56.872	Rhinopithecus_bieti
ENSORLG00020012792	si:ch211-117n7.8	81	57.109	ENSRROG00000041599	SRBD1	83	56.872	Rhinopithecus_roxellana
ENSORLG00020012792	si:ch211-117n7.8	82	56.757	ENSSBOG00000024982	SRBD1	83	56.757	Saimiri_boliviensis_boliviensis
ENSORLG00020012792	si:ch211-117n7.8	85	65.596	ENSSFOG00015001128	si:ch211-117n7.8	94	65.596	Scleropages_formosus
ENSORLG00020012792	si:ch211-117n7.8	100	74.200	ENSSMAG00000018256	si:ch211-117n7.8	100	74.200	Scophthalmus_maximus
ENSORLG00020012792	si:ch211-117n7.8	93	76.598	ENSSLDG00000023189	si:ch211-117n7.8	100	75.345	Seriola_lalandi_dorsalis
ENSORLG00020012792	si:ch211-117n7.8	93	48.758	ENSSARG00000009740	SRBD1	98	47.748	Sorex_araneus
ENSORLG00020012792	si:ch211-117n7.8	83	58.803	ENSSPUG00000010475	SRBD1	94	58.803	Sphenodon_punctatus
ENSORLG00020012792	si:ch211-117n7.8	92	76.140	ENSSPAG00000008092	-	100	72.816	Stegastes_partitus
ENSORLG00020012792	si:ch211-117n7.8	99	50.821	ENSSSCG00000008445	SRBD1	98	50.821	Sus_scrofa
ENSORLG00020012792	si:ch211-117n7.8	81	57.701	ENSTGUG00000003878	SRBD1	99	57.464	Taeniopygia_guttata
ENSORLG00020012792	si:ch211-117n7.8	99	70.417	ENSTRUG00000007080	si:ch211-117n7.8	98	76.384	Takifugu_rubripes
ENSORLG00020012792	si:ch211-117n7.8	97	69.574	ENSTNIG00000007464	si:ch211-117n7.8	98	69.574	Tetraodon_nigroviridis
ENSORLG00020012792	si:ch211-117n7.8	56	78.723	ENSTBEG00000004556	SRBD1	69	78.723	Tupaia_belangeri
ENSORLG00020012792	si:ch211-117n7.8	76	57.848	ENSTTRG00000011871	SRBD1	90	58.289	Tursiops_truncatus
ENSORLG00020012792	si:ch211-117n7.8	82	57.462	ENSUAMG00000008126	SRBD1	97	55.072	Ursus_americanus
ENSORLG00020012792	si:ch211-117n7.8	82	57.697	ENSUMAG00000012902	SRBD1	98	50.629	Ursus_maritimus
ENSORLG00020012792	si:ch211-117n7.8	82	56.588	ENSVPAG00000006825	SRBD1	91	56.235	Vicugna_pacos
ENSORLG00020012792	si:ch211-117n7.8	81	57.278	ENSVVUG00000005389	SRBD1	99	50.484	Vulpes_vulpes
ENSORLG00020012792	si:ch211-117n7.8	98	45.118	ENSXETG00000002760	srbd1	98	44.834	Xenopus_tropicalis
ENSORLG00020012792	si:ch211-117n7.8	100	75.758	ENSXMAG00000016861	si:ch211-117n7.8	100	74.951	Xiphophorus_maculatus