EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020012815 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 6854 bases
Position: chr12:3892738-3899591
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020011873	RRM_1	PF00076.22	6e-06	1	1
ENSORLP00020029021	RRM_1	PF00076.22	6.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020018876	-	402	-	ENSORLP00020029021	133 (aa)	-	-
ENSORLT00020018887	-	399	-	ENSORLP00020011873	132 (aa)	-	-

Gene Model

Click here to download ENSORLG00020012815's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020012815's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020012815	-	70	62.366	ENSORLG00020009393	-	75	67.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020012815	-	64	69.412	ENSG00000116754	SRSF11	66	69.412	Homo_sapiens
ENSORLG00020012815	-	87	75.214	ENSG00000153914	SREK1	81	86.420	Homo_sapiens
ENSORLG00020012815	-	63	67.470	ENSAPOG00000007244	-	59	68.293	Acanthochromis_polyacanthus
ENSORLG00020012815	-	64	67.857	ENSAPOG00000004488	-	78	67.857	Acanthochromis_polyacanthus
ENSORLG00020012815	-	70	62.366	ENSACIG00000018075	-	78	67.857	Amphilophus_citrinellus
ENSORLG00020012815	-	91	84.677	ENSACIG00000015055	-	95	84.874	Amphilophus_citrinellus
ENSORLG00020012815	-	69	63.736	ENSACIG00000012348	-	95	64.444	Amphilophus_citrinellus
ENSORLG00020012815	-	62	68.293	ENSAOCG00000000739	-	87	68.293	Amphiprion_ocellaris
ENSORLG00020012815	-	67	94.382	ENSAOCG00000024368	-	85	95.238	Amphiprion_ocellaris
ENSORLG00020012815	-	64	66.667	ENSAPEG00000003142	SRSF11	86	67.470	Amphiprion_percula
ENSORLG00020012815	-	64	67.857	ENSAPEG00000003619	SRSF11	78	67.857	Amphiprion_percula
ENSORLG00020012815	-	65	94.186	ENSAPEG00000002218	-	88	95.062	Amphiprion_percula
ENSORLG00020012815	-	64	91.765	ENSATEG00000009464	-	93	91.765	Anabas_testudineus
ENSORLG00020012815	-	64	67.857	ENSATEG00000007534	-	78	67.857	Anabas_testudineus
ENSORLG00020012815	-	63	67.470	ENSATEG00000011691	srsf11	93	59.000	Anabas_testudineus
ENSORLG00020012815	-	96	71.318	ENSANAG00000031358	SREK1	81	86.420	Aotus_nancymaae
ENSORLG00020012815	-	63	67.470	ENSACLG00000000623	srsf11	96	60.638	Astatotilapia_calliptera
ENSORLG00020012815	-	62	85.542	ENSBTAG00000007321	SREK1	81	86.420	Bos_taurus
ENSORLG00020012815	-	80	71.818	ENSCJAG00000015950	SREK1	81	86.420	Callithrix_jacchus
ENSORLG00020012815	-	87	75.214	ENSCAFG00020019449	-	81	86.420	Canis_lupus_dingo
ENSORLG00020012815	-	64	68.235	ENSCAFG00020017255	-	75	68.235	Canis_lupus_dingo
ENSORLG00020012815	-	61	86.420	ENSCHIG00000025052	-	81	86.420	Capra_hircus
ENSORLG00020012815	-	64	68.235	ENSCHIG00000025295	SRSF11	72	68.235	Capra_hircus
ENSORLG00020012815	-	68	61.538	ENSTSYG00000033270	-	64	61.538	Carlito_syrichta
ENSORLG00020012815	-	87	75.214	ENSTSYG00000036957	SREK1	81	86.420	Carlito_syrichta
ENSORLG00020012815	-	96	71.318	ENSCCAG00000020591	SREK1	81	86.420	Cebus_capucinus
ENSORLG00020012815	-	62	86.585	ENSCATG00000031482	SREK1	81	86.420	Cercocebus_atys
ENSORLG00020012815	-	88	52.586	ENSCPBG00000022430	-	88	52.174	Chrysemys_picta_bellii
ENSORLG00020012815	-	97	73.077	ENSCPBG00000026866	SREK1	88	77.778	Chrysemys_picta_bellii
ENSORLG00020012815	-	62	86.585	ENSCANG00000030421	SREK1	81	86.420	Colobus_angolensis_palliatus
ENSORLG00020012815	-	90	78.992	ENSCSEG00000013934	-	90	92.405	Cynoglossus_semilaevis
ENSORLG00020012815	-	91	82.787	ENSCVAG00000002404	-	95	82.906	Cyprinodon_variegatus
ENSORLG00020012815	-	65	65.116	ENSDARG00000098574	srsf11	93	65.882	Danio_rerio
ENSORLG00020012815	-	87	76.923	ENSDORG00000023160	-	87	76.923	Dipodomys_ordii
ENSORLG00020012815	-	87	75.214	ENSEASG00005006832	-	87	75.214	Equus_asinus_asinus
ENSORLG00020012815	-	64	68.235	ENSEASG00005007847	SRSF11	75	68.235	Equus_asinus_asinus
ENSORLG00020012815	-	87	75.214	ENSECAG00000035731	-	87	75.214	Equus_caballus
ENSORLG00020012815	-	61	86.420	ENSFCAG00000036884	-	81	86.420	Felis_catus
ENSORLG00020012815	-	64	69.412	ENSFCAG00000034448	-	67	69.412	Felis_catus
ENSORLG00020012815	-	92	80.159	ENSFHEG00000020959	-	93	81.667	Fundulus_heteroclitus
ENSORLG00020012815	-	80	74.528	ENSGALG00000043541	SREK1	82	90.123	Gallus_gallus
ENSORLG00020012815	-	91	77.686	ENSGAFG00000001732	-	95	77.586	Gambusia_affinis
ENSORLG00020012815	-	97	73.077	ENSGAGG00000006087	SREK1	88	77.778	Gopherus_agassizii
ENSORLG00020012815	-	65	70.930	ENSGAGG00000022411	-	83	70.588	Gopherus_agassizii
ENSORLG00020012815	-	87	75.214	ENSGGOG00000004737	SREK1	81	86.420	Gorilla_gorilla
ENSORLG00020012815	-	97	77.692	ENSHBUG00000007082	-	87	80.342	Haplochromis_burtoni
ENSORLG00020012815	-	67	63.636	ENSHCOG00000016860	-	96	60.638	Hippocampus_comes
ENSORLG00020012815	-	62	92.771	ENSHCOG00000017228	-	77	92.771	Hippocampus_comes
ENSORLG00020012815	-	62	85.542	ENSSTOG00000008850	SREK1	81	86.420	Ictidomys_tridecemlineatus
ENSORLG00020012815	-	87	76.068	ENSJJAG00000008846	-	89	76.068	Jaculus_jaculus
ENSORLG00020012815	-	63	67.470	ENSLBEG00000024167	srsf11	96	60.638	Labrus_bergylta
ENSORLG00020012815	-	90	78.740	ENSLBEG00000022954	-	89	78.049	Labrus_bergylta
ENSORLG00020012815	-	87	75.214	ENSMFAG00000039823	SREK1	81	86.420	Macaca_fascicularis
ENSORLG00020012815	-	62	86.585	ENSMMUG00000014586	SREK1	75	86.585	Macaca_mulatta
ENSORLG00020012815	-	62	86.585	ENSMNEG00000030723	SREK1	81	86.420	Macaca_nemestrina
ENSORLG00020012815	-	62	85.542	ENSMLEG00000039078	SREK1	81	86.420	Mandrillus_leucophaeus
ENSORLG00020012815	-	67	94.382	ENSMAMG00000003099	-	82	95.238	Mastacembelus_armatus
ENSORLG00020012815	-	64	67.857	ENSMAMG00000015002	-	79	67.857	Mastacembelus_armatus
ENSORLG00020012815	-	93	74.400	ENSMZEG00005005707	-	88	80.357	Maylandia_zebra
ENSORLG00020012815	-	62	85.542	ENSMICG00000034959	SREK1	81	86.420	Microcebus_murinus
ENSORLG00020012815	-	62	66.265	ENSMMOG00000008877	-	81	67.073	Mola_mola
ENSORLG00020012815	-	64	67.857	ENSMMOG00000016751	-	78	67.857	Mola_mola
ENSORLG00020012815	-	67	64.773	ENSMALG00000016608	srsf11	86	67.857	Monopterus_albus
ENSORLG00020012815	-	65	91.954	ENSMALG00000017086	srek1	91	92.593	Monopterus_albus
ENSORLG00020012815	-	65	69.767	MGP_CAROLIEiJ_G0025767	Srsf11	85	69.412	Mus_caroli
ENSORLG00020012815	-	65	69.767	ENSMUSG00000055436	Srsf11	84	69.412	Mus_musculus
ENSORLG00020012815	-	65	69.767	MGP_PahariEiJ_G0027217	Srsf11	85	69.412	Mus_pahari
ENSORLG00020012815	-	65	69.767	MGP_SPRETEiJ_G0026719	Srsf11	85	69.412	Mus_spretus
ENSORLG00020012815	-	87	76.923	ENSNGAG00000014631	-	87	76.923	Nannospalax_galili
ENSORLG00020012815	-	69	63.736	ENSNBRG00000020213	-	95	64.444	Neolamprologus_brichardi
ENSORLG00020012815	-	97	77.692	ENSNBRG00000010656	-	87	80.342	Neolamprologus_brichardi
ENSORLG00020012815	-	62	86.585	ENSNLEG00000003827	SREK1	81	86.420	Nomascus_leucogenys
ENSORLG00020012815	-	87	75.214	ENSODEG00000016218	-	79	87.654	Octodon_degus
ENSORLG00020012815	-	58	100.000	ENSORLG00000002711	-	67	97.500	Oryzias_latipes
ENSORLG00020012815	-	64	67.857	ENSORLG00000030366	-	75	67.857	Oryzias_latipes
ENSORLG00020012815	-	70	62.366	ENSORLG00015009374	-	75	67.857	Oryzias_latipes_hsok
ENSORLG00020012815	-	100	96.212	ENSORLG00015020455	-	100	96.212	Oryzias_latipes_hsok
ENSORLG00020012815	-	87	75.214	ENSPPAG00000031605	SREK1	87	75.214	Pan_paniscus
ENSORLG00020012815	-	62	85.542	ENSPPRG00000024617	SREK1	81	86.420	Panthera_pardus
ENSORLG00020012815	-	62	85.542	ENSPTIG00000006608	SREK1	81	86.420	Panthera_tigris_altaica
ENSORLG00020012815	-	87	75.214	ENSPTRG00000016936	SREK1	81	86.420	Pan_troglodytes
ENSORLG00020012815	-	87	75.214	ENSPANG00000008953	SREK1	81	86.420	Papio_anubis
ENSORLG00020012815	-	69	62.637	ENSPKIG00000021576	-	95	63.333	Paramormyrops_kingsleyae
ENSORLG00020012815	-	72	61.053	ENSPMGG00000005045	-	82	61.702	Periophthalmus_magnuspinnatus
ENSORLG00020012815	-	71	80.000	ENSPMGG00000017029	-	78	81.111	Periophthalmus_magnuspinnatus
ENSORLG00020012815	-	70	62.366	ENSPMGG00000000954	-	87	63.043	Periophthalmus_magnuspinnatus
ENSORLG00020012815	-	98	70.896	ENSPLAG00000014609	-	85	77.586	Poecilia_latipinna
ENSORLG00020012815	-	98	70.896	ENSPLAG00000008818	-	85	77.586	Poecilia_latipinna
ENSORLG00020012815	-	84	56.522	ENSPLAG00000009484	-	76	56.522	Poecilia_latipinna
ENSORLG00020012815	-	84	56.522	ENSPMEG00000023453	-	76	56.522	Poecilia_mexicana
ENSORLG00020012815	-	98	70.896	ENSPMEG00000006824	-	85	77.586	Poecilia_mexicana
ENSORLG00020012815	-	98	70.896	ENSPMEG00000006607	-	85	77.586	Poecilia_mexicana
ENSORLG00020012815	-	65	66.279	ENSPMEG00000018837	srsf11	70	67.059	Poecilia_mexicana
ENSORLG00020012815	-	91	89.516	ENSPREG00000019922	-	95	89.916	Poecilia_reticulata
ENSORLG00020012815	-	87	75.214	ENSPCOG00000026230	SREK1	81	86.420	Propithecus_coquereli
ENSORLG00020012815	-	97	77.692	ENSPNYG00000007178	-	87	80.342	Pundamilia_nyererei
ENSORLG00020012815	-	87	75.214	ENSRBIG00000033818	SREK1	81	86.420	Rhinopithecus_bieti
ENSORLG00020012815	-	64	67.857	ENSRBIG00000042971	SRSF11	65	67.857	Rhinopithecus_bieti
ENSORLG00020012815	-	62	86.585	ENSRROG00000017210	SREK1	81	86.420	Rhinopithecus_roxellana
ENSORLG00020012815	-	64	67.857	ENSSBOG00000033461	SRSF11	65	67.857	Saimiri_boliviensis_boliviensis
ENSORLG00020012815	-	96	71.318	ENSSBOG00000031230	SREK1	81	86.420	Saimiri_boliviensis_boliviensis
ENSORLG00020012815	-	59	69.231	ENSSFOG00015016086	-	74	66.667	Scleropages_formosus
ENSORLG00020012815	-	67	93.258	ENSSDUG00000010395	-	83	94.048	Seriola_dumerili
ENSORLG00020012815	-	63	67.470	ENSSLDG00000015477	-	96	60.638	Seriola_lalandi_dorsalis
ENSORLG00020012815	-	67	93.258	ENSSLDG00000016285	-	83	94.048	Seriola_lalandi_dorsalis
ENSORLG00020012815	-	64	67.857	ENSSLDG00000012105	-	78	67.857	Seriola_lalandi_dorsalis
ENSORLG00020012815	-	62	69.512	ENSSPAG00000016483	-	66	69.512	Stegastes_partitus
ENSORLG00020012815	-	68	93.333	ENSSPAG00000022310	-	85	95.238	Stegastes_partitus
ENSORLG00020012815	-	90	85.950	ENSTRUG00000022058	-	95	85.470	Takifugu_rubripes
ENSORLG00020012815	-	62	86.585	ENSUAMG00000022662	-	75	86.585	Ursus_americanus
ENSORLG00020012815	-	64	67.857	ENSUAMG00000008403	-	65	67.857	Ursus_americanus
ENSORLG00020012815	-	87	75.214	ENSVVUG00000005888	-	81	86.420	Vulpes_vulpes
ENSORLG00020012815	-	64	67.857	ENSXCOG00000015127	-	90	67.857	Xiphophorus_couchianus
ENSORLG00020012815	-	68	67.778	ENSXCOG00000003220	-	71	69.512	Xiphophorus_couchianus
ENSORLG00020012815	-	90	78.333	ENSXCOG00000017792	-	91	77.586	Xiphophorus_couchianus
ENSORLG00020012815	-	91	77.686	ENSXMAG00000028210	-	95	77.586	Xiphophorus_maculatus
ENSORLG00020012815	-	84	56.522	ENSXMAG00000019180	SRSF11	73	56.522	Xiphophorus_maculatus