EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020012878 (Gene tree)
Gene ID: -
Gene Symbol: secisbp2
Alias: -
Full Name: SECIS binding protein 2
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 12535 bases
Position: chr9:1303684-1316218
Accession: ZDB-GENE-050208-263
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020029058	Ribosomal_L7Ae	PF01248.26	5.8e-21	1	1
ENSORLP00020011949	Ribosomal_L7Ae	PF01248.26	6.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020018972	-	5326	-	ENSORLP00020011949	732 (aa)	-	-
ENSORLT00020031983	-	2292	-	ENSORLP00020029058	666 (aa)	-	-

Gene Model

Click here to download ENSORLG00020012878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020012878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020012878	secisbp2	57	45.226	ENSG00000138593	SECISBP2L	62	45.226	Homo_sapiens
ENSORLG00020012878	secisbp2	70	48.101	ENSG00000187742	SECISBP2	57	48.632	Homo_sapiens
ENSORLG00020012878	secisbp2	99	60.820	ENSAPOG00000005939	secisbp2	93	60.322	Acanthochromis_polyacanthus
ENSORLG00020012878	secisbp2	67	51.092	ENSAMEG00000003349	SECISBP2	50	51.092	Ailuropoda_melanoleuca
ENSORLG00020012878	secisbp2	66	62.402	ENSACIG00000024185	secisbp2	83	62.402	Amphilophus_citrinellus
ENSORLG00020012878	secisbp2	99	60.563	ENSAOCG00000019052	secisbp2	91	60.552	Amphiprion_ocellaris
ENSORLG00020012878	secisbp2	99	60.141	ENSAPEG00000012971	secisbp2	91	60.138	Amphiprion_percula
ENSORLG00020012878	secisbp2	98	60.951	ENSATEG00000001095	secisbp2	93	58.457	Anabas_testudineus
ENSORLG00020012878	secisbp2	82	45.517	ENSAPLG00000013053	SECISBP2	63	45.000	Anas_platyrhynchos
ENSORLG00020012878	secisbp2	85	43.944	ENSACAG00000016594	SECISBP2	74	44.601	Anolis_carolinensis
ENSORLG00020012878	secisbp2	75	38.986	ENSACAG00000006021	SECISBP2L	58	38.756	Anolis_carolinensis
ENSORLG00020012878	secisbp2	68	48.366	ENSANAG00000028208	SECISBP2	52	48.734	Aotus_nancymaae
ENSORLG00020012878	secisbp2	98	56.633	ENSACLG00000019976	secisbp2	94	54.090	Astatotilapia_calliptera
ENSORLG00020012878	secisbp2	90	50.746	ENSAMXG00000015953	secisbp2	87	49.714	Astyanax_mexicanus
ENSORLG00020012878	secisbp2	67	51.435	ENSBTAG00000001939	SECISBP2	53	55.051	Bos_taurus
ENSORLG00020012878	secisbp2	67	49.011	ENSCJAG00000007806	SECISBP2	50	49.453	Callithrix_jacchus
ENSORLG00020012878	secisbp2	67	50.847	ENSCAFG00000002188	SECISBP2	50	50.743	Canis_familiaris
ENSORLG00020012878	secisbp2	67	50.855	ENSCAFG00020007224	SECISBP2	50	50.743	Canis_lupus_dingo
ENSORLG00020012878	secisbp2	67	47.300	ENSTSYG00000014119	SECISBP2	54	49.781	Carlito_syrichta
ENSORLG00020012878	secisbp2	53	52.500	ENSCAPG00000008522	SECISBP2	51	53.867	Cavia_aperea
ENSORLG00020012878	secisbp2	67	49.237	ENSCPOG00000014270	SECISBP2	50	50.325	Cavia_porcellus
ENSORLG00020012878	secisbp2	67	49.451	ENSCCAG00000013350	SECISBP2	50	49.891	Cebus_capucinus
ENSORLG00020012878	secisbp2	67	49.011	ENSCATG00000008304	SECISBP2	50	49.127	Cercocebus_atys
ENSORLG00020012878	secisbp2	67	49.123	ENSCSAG00000007310	SECISBP2	50	49.563	Chlorocebus_sabaeus
ENSORLG00020012878	secisbp2	60	54.034	ENSCPBG00000005608	SECISBP2	79	54.964	Chrysemys_picta_bellii
ENSORLG00020012878	secisbp2	67	48.904	ENSCANG00000034551	SECISBP2	54	49.345	Colobus_angolensis_palliatus
ENSORLG00020012878	secisbp2	67	48.796	ENSCGRG00001013930	Secisbp2	50	49.015	Cricetulus_griseus_chok1gshd
ENSORLG00020012878	secisbp2	67	48.796	ENSCGRG00000002600	Secisbp2	50	49.015	Cricetulus_griseus_crigri
ENSORLG00020012878	secisbp2	98	58.003	ENSCVAG00000015876	secisbp2	94	55.316	Cyprinodon_variegatus
ENSORLG00020012878	secisbp2	82	55.694	ENSDARG00000073892	secisbp2	98	55.908	Danio_rerio
ENSORLG00020012878	secisbp2	52	45.714	ENSEBUG00000008208	secisbp2	90	45.714	Eptatretus_burgeri
ENSORLG00020012878	secisbp2	67	50.855	ENSEASG00005013960	SECISBP2	50	50.855	Equus_asinus_asinus
ENSORLG00020012878	secisbp2	67	50.866	ENSECAG00000015868	SECISBP2	50	50.866	Equus_caballus
ENSORLG00020012878	secisbp2	64	55.684	ENSELUG00000014795	-	92	55.684	Esox_lucius
ENSORLG00020012878	secisbp2	60	53.922	ENSFCAG00000004214	SECISBP2	50	50.330	Felis_catus
ENSORLG00020012878	secisbp2	81	45.671	ENSFALG00000012441	SECISBP2	77	41.749	Ficedula_albicollis
ENSORLG00020012878	secisbp2	70	49.787	ENSFDAG00000021183	SECISBP2	50	50.106	Fukomys_damarensis
ENSORLG00020012878	secisbp2	99	59.452	ENSFHEG00000004095	secisbp2	95	56.878	Fundulus_heteroclitus
ENSORLG00020012878	secisbp2	75	41.093	ENSGMOG00000014876	SECISBP2L	52	41.385	Gadus_morhua
ENSORLG00020012878	secisbp2	57	48.363	ENSGALG00000041362	SECISBP2L	66	37.627	Gallus_gallus
ENSORLG00020012878	secisbp2	77	45.685	ENSGALG00000010694	SECISBP2	59	47.332	Gallus_gallus
ENSORLG00020012878	secisbp2	98	59.710	ENSGAFG00000016947	secisbp2	95	57.600	Gambusia_affinis
ENSORLG00020012878	secisbp2	90	59.936	ENSGACG00000013757	secisbp2	99	59.936	Gasterosteus_aculeatus
ENSORLG00020012878	secisbp2	70	48.101	ENSGGOG00000000453	SECISBP2	56	48.632	Gorilla_gorilla
ENSORLG00020012878	secisbp2	62	68.246	ENSHBUG00000007014	secisbp2	100	68.246	Haplochromis_burtoni
ENSORLG00020012878	secisbp2	88	51.232	ENSHCOG00000008010	secisbp2	83	52.217	Hippocampus_comes
ENSORLG00020012878	secisbp2	90	50.998	ENSIPUG00000015393	secisbp2	81	52.074	Ictalurus_punctatus
ENSORLG00020012878	secisbp2	88	41.167	ENSJJAG00000020492	Secisbp2	50	49.227	Jaculus_jaculus
ENSORLG00020012878	secisbp2	96	57.910	ENSKMAG00000007129	secisbp2	93	56.361	Kryptolebias_marmoratus
ENSORLG00020012878	secisbp2	97	56.729	ENSLBEG00000026023	secisbp2	90	56.044	Labrus_bergylta
ENSORLG00020012878	secisbp2	69	50.630	ENSLACG00000005735	SECISBP2	87	50.630	Latimeria_chalumnae
ENSORLG00020012878	secisbp2	81	55.888	ENSLOCG00000011742	secisbp2	94	55.862	Lepisosteus_oculatus
ENSORLG00020012878	secisbp2	90	38.700	ENSLAFG00000012998	SECISBP2	74	35.882	Loxodonta_africana
ENSORLG00020012878	secisbp2	67	48.465	ENSMFAG00000003045	SECISBP2	55	48.908	Macaca_fascicularis
ENSORLG00020012878	secisbp2	67	48.684	ENSMMUG00000012532	SECISBP2	55	49.127	Macaca_mulatta
ENSORLG00020012878	secisbp2	67	48.026	ENSMNEG00000031737	SECISBP2	54	48.253	Macaca_nemestrina
ENSORLG00020012878	secisbp2	67	48.684	ENSMLEG00000028868	SECISBP2	54	49.127	Mandrillus_leucophaeus
ENSORLG00020012878	secisbp2	99	57.303	ENSMAMG00000006644	secisbp2	95	55.746	Mastacembelus_armatus
ENSORLG00020012878	secisbp2	98	56.633	ENSMZEG00005013614	secisbp2	94	54.090	Maylandia_zebra
ENSORLG00020012878	secisbp2	61	47.939	ENSMAUG00000008659	Secisbp2	51	48.156	Mesocricetus_auratus
ENSORLG00020012878	secisbp2	67	48.918	ENSMICG00000001176	SECISBP2	54	49.234	Microcebus_murinus
ENSORLG00020012878	secisbp2	67	48.690	ENSMOCG00000000616	Secisbp2	50	48.908	Microtus_ochrogaster
ENSORLG00020012878	secisbp2	61	67.157	ENSMMOG00000017977	secisbp2	91	67.157	Mola_mola
ENSORLG00020012878	secisbp2	91	41.837	ENSMODG00000013365	SECISBP2	53	51.458	Monodelphis_domestica
ENSORLG00020012878	secisbp2	97	58.480	ENSMALG00000004907	secisbp2	95	56.967	Monopterus_albus
ENSORLG00020012878	secisbp2	57	45.844	MGP_CAROLIEiJ_G0024231	Secisbp2l	76	48.810	Mus_caroli
ENSORLG00020012878	secisbp2	67	50.109	MGP_CAROLIEiJ_G0018518	Secisbp2	50	50.000	Mus_caroli
ENSORLG00020012878	secisbp2	57	45.844	ENSMUSG00000035093	Secisbp2l	75	48.810	Mus_musculus
ENSORLG00020012878	secisbp2	67	49.783	ENSMUSG00000035139	Secisbp2	50	49.892	Mus_musculus
ENSORLG00020012878	secisbp2	88	41.433	MGP_PahariEiJ_G0019584	Secisbp2	50	50.437	Mus_pahari
ENSORLG00020012878	secisbp2	57	45.592	MGP_PahariEiJ_G0025677	Secisbp2l	76	48.512	Mus_pahari
ENSORLG00020012878	secisbp2	53	48.361	MGP_SPRETEiJ_G0025151	Secisbp2l	76	48.810	Mus_spretus
ENSORLG00020012878	secisbp2	67	49.462	MGP_SPRETEiJ_G0019399	Secisbp2	50	49.356	Mus_spretus
ENSORLG00020012878	secisbp2	67	49.892	ENSMPUG00000008495	-	77	49.892	Mustela_putorius_furo
ENSORLG00020012878	secisbp2	67	49.673	ENSNGAG00000002364	Secisbp2	50	50.324	Nannospalax_galili
ENSORLG00020012878	secisbp2	98	57.305	ENSNBRG00000022804	secisbp2	94	54.593	Neolamprologus_brichardi
ENSORLG00020012878	secisbp2	70	48.233	ENSNLEG00000008739	SECISBP2	56	48.755	Nomascus_leucogenys
ENSORLG00020012878	secisbp2	67	45.778	ENSOPRG00000007588	SECISBP2	52	45.778	Ochotona_princeps
ENSORLG00020012878	secisbp2	67	51.656	ENSODEG00000000675	SECISBP2	50	51.656	Octodon_degus
ENSORLG00020012878	secisbp2	76	64.854	ENSONIG00000016931	secisbp2	100	68.408	Oreochromis_niloticus
ENSORLG00020012878	secisbp2	70	49.471	ENSOCUG00000012932	SECISBP2	52	49.160	Oryctolagus_cuniculus
ENSORLG00020012878	secisbp2	100	97.823	ENSORLG00000000343	secisbp2	100	97.823	Oryzias_latipes
ENSORLG00020012878	secisbp2	100	97.007	ENSORLG00015004559	secisbp2	100	97.007	Oryzias_latipes_hsok
ENSORLG00020012878	secisbp2	99	77.130	ENSOMEG00000008595	secisbp2	99	75.782	Oryzias_melastigma
ENSORLG00020012878	secisbp2	67	50.433	ENSOARG00000007741	SECISBP2	50	50.433	Ovis_aries
ENSORLG00020012878	secisbp2	70	48.312	ENSPPAG00000012385	SECISBP2	56	48.842	Pan_paniscus
ENSORLG00020012878	secisbp2	60	53.808	ENSPPRG00000023911	SECISBP2	50	50.549	Panthera_pardus
ENSORLG00020012878	secisbp2	70	48.523	ENSPTRG00000021094	SECISBP2	57	49.053	Pan_troglodytes
ENSORLG00020012878	secisbp2	67	48.802	ENSPANG00000024873	SECISBP2	50	49.241	Papio_anubis
ENSORLG00020012878	secisbp2	94	48.418	ENSPKIG00000006499	SECISBP2	83	48.414	Paramormyrops_kingsleyae
ENSORLG00020012878	secisbp2	53	50.949	ENSPKIG00000020244	SECISBP2L	52	40.702	Paramormyrops_kingsleyae
ENSORLG00020012878	secisbp2	82	44.113	ENSPSIG00000016257	SECISBP2	73	45.799	Pelodiscus_sinensis
ENSORLG00020012878	secisbp2	67	48.904	ENSPEMG00000020212	Secisbp2	50	50.769	Peromyscus_maniculatus_bairdii
ENSORLG00020012878	secisbp2	91	42.297	ENSPCIG00000010304	SECISBP2	53	51.148	Phascolarctos_cinereus
ENSORLG00020012878	secisbp2	98	59.286	ENSPFOG00000008146	secisbp2	100	59.874	Poecilia_formosa
ENSORLG00020012878	secisbp2	65	69.863	ENSPLAG00000004505	secisbp2	99	69.863	Poecilia_latipinna
ENSORLG00020012878	secisbp2	98	59.110	ENSPMEG00000013702	secisbp2	96	57.293	Poecilia_mexicana
ENSORLG00020012878	secisbp2	94	60.574	ENSPREG00000008117	secisbp2	96	56.955	Poecilia_reticulata
ENSORLG00020012878	secisbp2	70	48.734	ENSPPYG00000019359	SECISBP2	52	49.263	Pongo_abelii
ENSORLG00020012878	secisbp2	87	39.280	ENSPCAG00000000559	-	51	45.197	Procavia_capensis
ENSORLG00020012878	secisbp2	67	49.567	ENSPCOG00000013354	SECISBP2	50	49.893	Propithecus_coquereli
ENSORLG00020012878	secisbp2	98	56.491	ENSPNYG00000016799	secisbp2	94	53.958	Pundamilia_nyererei
ENSORLG00020012878	secisbp2	86	49.622	ENSPNAG00000029922	secisbp2	86	49.102	Pygocentrus_nattereri
ENSORLG00020012878	secisbp2	67	49.675	ENSRNOG00000013773	Secisbp2	50	49.675	Rattus_norvegicus
ENSORLG00020012878	secisbp2	67	48.904	ENSRBIG00000044115	SECISBP2	50	49.345	Rhinopithecus_bieti
ENSORLG00020012878	secisbp2	67	48.684	ENSRROG00000030742	SECISBP2	51	52.897	Rhinopithecus_roxellana
ENSORLG00020012878	secisbp2	67	49.342	ENSSBOG00000015392	SECISBP2	54	53.652	Saimiri_boliviensis_boliviensis
ENSORLG00020012878	secisbp2	90	41.353	ENSSHAG00000005947	SECISBP2	51	51.183	Sarcophilus_harrisii
ENSORLG00020012878	secisbp2	91	48.331	ENSSFOG00015010409	secisbp2	90	45.897	Scleropages_formosus
ENSORLG00020012878	secisbp2	99	59.116	ENSSMAG00000008472	secisbp2	99	60.968	Scophthalmus_maximus
ENSORLG00020012878	secisbp2	98	59.659	ENSSDUG00000002089	secisbp2	93	58.159	Seriola_dumerili
ENSORLG00020012878	secisbp2	98	59.375	ENSSLDG00000003510	secisbp2	93	57.447	Seriola_lalandi_dorsalis
ENSORLG00020012878	secisbp2	79	47.321	ENSSPUG00000009635	SECISBP2	72	46.712	Sphenodon_punctatus
ENSORLG00020012878	secisbp2	99	61.119	ENSSPAG00000013606	secisbp2	93	59.973	Stegastes_partitus
ENSORLG00020012878	secisbp2	71	49.793	ENSTGUG00000000440	SECISBP2	84	49.793	Taeniopygia_guttata
ENSORLG00020012878	secisbp2	97	54.913	ENSTRUG00000016835	secisbp2	99	52.843	Takifugu_rubripes
ENSORLG00020012878	secisbp2	74	60.878	ENSTNIG00000015576	secisbp2	98	61.179	Tetraodon_nigroviridis
ENSORLG00020012878	secisbp2	67	50.638	ENSUAMG00000016243	SECISBP2	50	53.753	Ursus_americanus
ENSORLG00020012878	secisbp2	67	50.213	ENSUMAG00000016261	SECISBP2	50	52.709	Ursus_maritimus
ENSORLG00020012878	secisbp2	67	50.847	ENSVVUG00000022278	SECISBP2	53	50.847	Vulpes_vulpes
ENSORLG00020012878	secisbp2	67	48.596	ENSXETG00000029955	SECISBP2	80	48.596	Xenopus_tropicalis
ENSORLG00020012878	secisbp2	70	65.473	ENSXCOG00000009547	secisbp2	88	65.473	Xiphophorus_couchianus
ENSORLG00020012878	secisbp2	98	58.345	ENSXMAG00000003090	secisbp2	95	56.601	Xiphophorus_maculatus