EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020012904 (Gene tree)
Gene ID: -
Gene Symbol: rbm8a
Alias: -
Full Name: RNA binding motif protein 8A
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 5745 bases
Position: chr16:27465325-27471069
Accession: ZDB-GENE-050306-51
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020029063	RRM_1	PF00076.22	5e-18	1	1
ENSORLP00020011931	RRM_1	PF00076.22	5.2e-18	1	1
ENSORLP00020029063	RRM_3	PF08777.11	2e-06	1	1
ENSORLP00020011931	RRM_3	PF08777.11	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020018974	-	1411	-	ENSORLP00020029063	188 (aa)	-	-
ENSORLT00020018951	-	1176	-	ENSORLP00020011931	191 (aa)	-	-

Gene Model

Click here to download ENSORLG00020012904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020012904's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020012904	rbm8a	80	89.404	ENSG00000265241	RBM8A	92	89.375	Homo_sapiens
ENSORLG00020012904	rbm8a	84	95.570	ENSAPOG00000009727	rbm8a	91	95.625	Acanthochromis_polyacanthus
ENSORLG00020012904	rbm8a	80	87.662	ENSAMEG00000017623	RBM8A	92	87.730	Ailuropoda_melanoleuca
ENSORLG00020012904	rbm8a	85	96.250	ENSACIG00000017678	rbm8a	100	96.250	Amphilophus_citrinellus
ENSORLG00020012904	rbm8a	93	89.714	ENSAOCG00000023887	rbm8a	86	89.831	Amphiprion_ocellaris
ENSORLG00020012904	rbm8a	93	89.714	ENSAPEG00000022847	rbm8a	86	89.831	Amphiprion_percula
ENSORLG00020012904	rbm8a	84	95.570	ENSATEG00000005630	rbm8a	91	95.625	Anabas_testudineus
ENSORLG00020012904	rbm8a	80	89.404	ENSANAG00000004525	RBM8A	92	89.375	Aotus_nancymaae
ENSORLG00020012904	rbm8a	84	94.937	ENSACLG00000009627	rbm8a	91	95.000	Astatotilapia_calliptera
ENSORLG00020012904	rbm8a	80	93.377	ENSAMXG00000040754	rbm8a	92	93.125	Astyanax_mexicanus
ENSORLG00020012904	rbm8a	76	52.703	WBGene00004387	rnp-4	87	58.730	Caenorhabditis_elegans
ENSORLG00020012904	rbm8a	80	89.404	ENSCJAG00000046869	RBM8A	92	89.375	Callithrix_jacchus
ENSORLG00020012904	rbm8a	80	89.404	ENSCAFG00000023172	RBM8A	92	89.375	Canis_familiaris
ENSORLG00020012904	rbm8a	80	89.404	ENSCAFG00020019945	RBM8A	92	89.375	Canis_lupus_dingo
ENSORLG00020012904	rbm8a	80	89.404	ENSCHIG00000012114	RBM8A	92	89.375	Capra_hircus
ENSORLG00020012904	rbm8a	80	89.404	ENSTSYG00000028809	RBM8A	92	89.375	Carlito_syrichta
ENSORLG00020012904	rbm8a	58	90.826	ENSCAPG00000014086	RBM8A	89	90.826	Cavia_aperea
ENSORLG00020012904	rbm8a	84	89.241	ENSCPOG00000022453	RBM8A	96	88.272	Cavia_porcellus
ENSORLG00020012904	rbm8a	80	89.404	ENSCCAG00000028589	-	92	89.375	Cebus_capucinus
ENSORLG00020012904	rbm8a	80	88.742	ENSCCAG00000022460	-	92	88.750	Cebus_capucinus
ENSORLG00020012904	rbm8a	80	89.404	ENSCATG00000021691	RBM8A	92	89.375	Cercocebus_atys
ENSORLG00020012904	rbm8a	80	89.404	ENSCLAG00000000547	RBM8A	92	89.375	Chinchilla_lanigera
ENSORLG00020012904	rbm8a	80	89.404	ENSCSAG00000001779	RBM8A	92	89.375	Chlorocebus_sabaeus
ENSORLG00020012904	rbm8a	80	89.404	ENSCPBG00000007941	RBM8A	74	89.375	Chrysemys_picta_bellii
ENSORLG00020012904	rbm8a	84	64.557	ENSCING00000004877	-	97	62.805	Ciona_intestinalis
ENSORLG00020012904	rbm8a	82	65.161	ENSCSAVG00000005685	-	96	64.417	Ciona_savignyi
ENSORLG00020012904	rbm8a	80	89.404	ENSCANG00000042182	RBM8A	92	89.375	Colobus_angolensis_palliatus
ENSORLG00020012904	rbm8a	82	74.839	ENSCGRG00001003032	-	92	75.000	Cricetulus_griseus_chok1gshd
ENSORLG00020012904	rbm8a	80	89.404	ENSCGRG00001002681	-	92	89.375	Cricetulus_griseus_chok1gshd
ENSORLG00020012904	rbm8a	80	89.404	ENSCGRG00000006832	-	92	89.375	Cricetulus_griseus_crigri
ENSORLG00020012904	rbm8a	84	94.937	ENSCSEG00000011865	rbm8a	91	95.000	Cynoglossus_semilaevis
ENSORLG00020012904	rbm8a	84	93.671	ENSCVAG00000020734	rbm8a	91	93.750	Cyprinodon_variegatus
ENSORLG00020012904	rbm8a	82	92.903	ENSDARG00000016516	rbm8a	92	92.500	Danio_rerio
ENSORLG00020012904	rbm8a	80	89.404	ENSDORG00000027340	-	100	83.041	Dipodomys_ordii
ENSORLG00020012904	rbm8a	85	61.728	FBgn0033378	tsu	96	62.112	Drosophila_melanogaster
ENSORLG00020012904	rbm8a	76	86.014	ENSETEG00000008411	-	81	86.014	Echinops_telfairi
ENSORLG00020012904	rbm8a	82	76.774	ENSETEG00000017932	-	92	76.875	Echinops_telfairi
ENSORLG00020012904	rbm8a	84	84.076	ENSEBUG00000010386	rbm8a	91	83.750	Eptatretus_burgeri
ENSORLG00020012904	rbm8a	80	89.404	ENSEASG00005007455	RBM8A	92	89.375	Equus_asinus_asinus
ENSORLG00020012904	rbm8a	80	89.404	ENSECAG00000022024	RBM8A	92	89.375	Equus_caballus
ENSORLG00020012904	rbm8a	80	60.927	ENSEEUG00000008823	RBM8A	92	62.500	Erinaceus_europaeus
ENSORLG00020012904	rbm8a	82	91.613	ENSELUG00000012464	rbm8a	91	91.250	Esox_lucius
ENSORLG00020012904	rbm8a	80	89.404	ENSFCAG00000033936	RBM8A	92	89.375	Felis_catus
ENSORLG00020012904	rbm8a	80	89.404	ENSFDAG00000020821	RBM8A	92	89.375	Fukomys_damarensis
ENSORLG00020012904	rbm8a	84	94.304	ENSFHEG00000013538	rbm8a	91	94.375	Fundulus_heteroclitus
ENSORLG00020012904	rbm8a	74	92.806	ENSGMOG00000007353	rbm8a	90	92.361	Gadus_morhua
ENSORLG00020012904	rbm8a	80	76.821	ENSGALG00000036283	RBM8A	91	77.500	Gallus_gallus
ENSORLG00020012904	rbm8a	84	94.937	ENSGAFG00000021698	rbm8a	91	95.000	Gambusia_affinis
ENSORLG00020012904	rbm8a	74	94.245	ENSGACG00000013157	rbm8a	90	93.750	Gasterosteus_aculeatus
ENSORLG00020012904	rbm8a	80	89.404	ENSGAGG00000023769	RBM8A	92	89.375	Gopherus_agassizii
ENSORLG00020012904	rbm8a	80	89.404	ENSGGOG00000037248	RBM8A	92	89.375	Gorilla_gorilla
ENSORLG00020012904	rbm8a	85	95.000	ENSHBUG00000008827	rbm8a	100	95.000	Haplochromis_burtoni
ENSORLG00020012904	rbm8a	80	89.404	ENSHGLG00000007303	RBM8A	92	89.375	Heterocephalus_glaber_female
ENSORLG00020012904	rbm8a	80	89.404	ENSHGLG00100012468	RBM8A	92	89.375	Heterocephalus_glaber_male
ENSORLG00020012904	rbm8a	83	93.590	ENSHCOG00000010122	rbm8a	91	92.500	Hippocampus_comes
ENSORLG00020012904	rbm8a	85	91.250	ENSIPUG00000006525	rbm8a	85	90.909	Ictalurus_punctatus
ENSORLG00020012904	rbm8a	80	88.742	ENSSTOG00000013917	RBM8A	92	88.750	Ictidomys_tridecemlineatus
ENSORLG00020012904	rbm8a	80	89.404	ENSJJAG00000009488	-	92	89.375	Jaculus_jaculus
ENSORLG00020012904	rbm8a	85	96.250	ENSKMAG00000014454	rbm8a	91	96.250	Kryptolebias_marmoratus
ENSORLG00020012904	rbm8a	84	94.937	ENSLBEG00000015720	rbm8a	91	95.000	Labrus_bergylta
ENSORLG00020012904	rbm8a	82	89.172	ENSLACG00000014365	RBM8A	92	88.889	Latimeria_chalumnae
ENSORLG00020012904	rbm8a	82	94.839	ENSLOCG00000009082	rbm8a	92	94.375	Lepisosteus_oculatus
ENSORLG00020012904	rbm8a	91	63.483	ENSLAFG00000011031	-	100	57.542	Loxodonta_africana
ENSORLG00020012904	rbm8a	82	89.677	ENSLAFG00000021886	-	92	89.375	Loxodonta_africana
ENSORLG00020012904	rbm8a	80	89.404	ENSMFAG00000045376	RBM8A	92	89.375	Macaca_fascicularis
ENSORLG00020012904	rbm8a	85	85.030	ENSMMUG00000016051	RBM8A	100	85.030	Macaca_mulatta
ENSORLG00020012904	rbm8a	80	89.404	ENSMNEG00000040422	RBM8A	92	89.375	Macaca_nemestrina
ENSORLG00020012904	rbm8a	80	89.404	ENSMLEG00000039155	RBM8A	92	89.375	Mandrillus_leucophaeus
ENSORLG00020012904	rbm8a	84	93.038	ENSMAMG00000010565	rbm8a	91	93.125	Mastacembelus_armatus
ENSORLG00020012904	rbm8a	84	94.937	ENSMZEG00005016453	rbm8a	91	95.000	Maylandia_zebra
ENSORLG00020012904	rbm8a	80	89.404	ENSMAUG00000016783	-	100	83.529	Mesocricetus_auratus
ENSORLG00020012904	rbm8a	80	89.404	ENSMICG00000031698	-	92	89.375	Microcebus_murinus
ENSORLG00020012904	rbm8a	85	72.500	ENSMICG00000037163	-	99	72.500	Microcebus_murinus
ENSORLG00020012904	rbm8a	80	89.404	ENSMOCG00000017782	-	92	89.375	Microtus_ochrogaster
ENSORLG00020012904	rbm8a	85	81.875	ENSMMOG00000017179	rbm8a	94	81.875	Mola_mola
ENSORLG00020012904	rbm8a	80	88.742	ENSMODG00000018752	RBM8A	92	88.750	Monodelphis_domestica
ENSORLG00020012904	rbm8a	84	92.405	ENSMALG00000010145	rbm8a	91	92.500	Monopterus_albus
ENSORLG00020012904	rbm8a	80	89.404	MGP_CAROLIEiJ_G0025383	Rbm8a	100	83.041	Mus_caroli
ENSORLG00020012904	rbm8a	80	87.417	MGP_CAROLIEiJ_G0014951	Rbm8a2	92	87.500	Mus_caroli
ENSORLG00020012904	rbm8a	80	89.404	ENSMUSG00000038374	Rbm8a	100	83.041	Mus_musculus
ENSORLG00020012904	rbm8a	80	88.079	ENSMUSG00000078184	Rbm8a2	92	88.125	Mus_musculus
ENSORLG00020012904	rbm8a	80	89.404	MGP_PahariEiJ_G0026828	-	100	83.041	Mus_pahari
ENSORLG00020012904	rbm8a	80	89.404	MGP_SPRETEiJ_G0026330	Rbm8a	100	83.041	Mus_spretus
ENSORLG00020012904	rbm8a	80	89.404	ENSMPUG00000000775	RBM8A	92	89.375	Mustela_putorius_furo
ENSORLG00020012904	rbm8a	80	89.404	ENSMLUG00000017436	-	92	89.375	Myotis_lucifugus
ENSORLG00020012904	rbm8a	80	82.781	ENSMLUG00000022711	-	92	82.500	Myotis_lucifugus
ENSORLG00020012904	rbm8a	82	89.677	ENSNGAG00000016038	-	92	89.375	Nannospalax_galili
ENSORLG00020012904	rbm8a	84	94.937	ENSNBRG00000004541	rbm8a	91	95.000	Neolamprologus_brichardi
ENSORLG00020012904	rbm8a	80	89.404	ENSNLEG00000029632	RBM8A	92	89.375	Nomascus_leucogenys
ENSORLG00020012904	rbm8a	57	88.889	ENSMEUG00000016058	RBM8A	89	88.889	Notamacropus_eugenii
ENSORLG00020012904	rbm8a	61	89.474	ENSOPRG00000013316	RBM8A	100	89.474	Ochotona_princeps
ENSORLG00020012904	rbm8a	80	75.497	ENSODEG00000002094	-	91	76.250	Octodon_degus
ENSORLG00020012904	rbm8a	80	78.146	ENSODEG00000008563	-	92	78.750	Octodon_degus
ENSORLG00020012904	rbm8a	80	89.404	ENSODEG00000000114	-	92	89.375	Octodon_degus
ENSORLG00020012904	rbm8a	84	94.937	ENSONIG00000008608	rbm8a	91	95.000	Oreochromis_niloticus
ENSORLG00020012904	rbm8a	80	87.662	ENSOCUG00000025693	RBM8A	92	87.730	Oryctolagus_cuniculus
ENSORLG00020012904	rbm8a	92	100.000	ENSORLG00000016263	rbm8a	100	100.000	Oryzias_latipes
ENSORLG00020012904	rbm8a	92	100.000	ENSORLG00015018824	rbm8a	100	100.000	Oryzias_latipes_hsok
ENSORLG00020012904	rbm8a	90	95.882	ENSOMEG00000021533	rbm8a	77	95.930	Oryzias_melastigma
ENSORLG00020012904	rbm8a	80	87.662	ENSOGAG00000000202	RBM8A	92	87.730	Otolemur_garnettii
ENSORLG00020012904	rbm8a	80	88.742	ENSOARG00000020634	RBM8A	92	88.750	Ovis_aries
ENSORLG00020012904	rbm8a	80	89.404	ENSPPAG00000029116	RBM8A	92	89.375	Pan_paniscus
ENSORLG00020012904	rbm8a	80	89.404	ENSPPRG00000008243	RBM8A	92	89.375	Panthera_pardus
ENSORLG00020012904	rbm8a	80	89.404	ENSPTIG00000009472	RBM8A	92	89.375	Panthera_tigris_altaica
ENSORLG00020012904	rbm8a	80	89.404	ENSPTRG00000001201	RBM8A	92	89.375	Pan_troglodytes
ENSORLG00020012904	rbm8a	80	89.404	ENSPANG00000020584	RBM8A	92	89.375	Papio_anubis
ENSORLG00020012904	rbm8a	86	90.741	ENSPKIG00000009551	rbm8a	70	90.303	Paramormyrops_kingsleyae
ENSORLG00020012904	rbm8a	82	90.968	ENSPKIG00000020558	rbm8a	92	90.625	Paramormyrops_kingsleyae
ENSORLG00020012904	rbm8a	84	95.570	ENSPMGG00000010122	rbm8a	91	95.625	Periophthalmus_magnuspinnatus
ENSORLG00020012904	rbm8a	80	89.404	ENSPEMG00000018117	-	92	89.375	Peromyscus_maniculatus_bairdii
ENSORLG00020012904	rbm8a	80	88.742	ENSPCIG00000011931	RBM8A	92	88.750	Phascolarctos_cinereus
ENSORLG00020012904	rbm8a	84	95.570	ENSPFOG00000010695	rbm8a	91	95.625	Poecilia_formosa
ENSORLG00020012904	rbm8a	84	95.570	ENSPLAG00000009183	rbm8a	91	95.625	Poecilia_latipinna
ENSORLG00020012904	rbm8a	84	95.570	ENSPMEG00000013950	rbm8a	91	95.625	Poecilia_mexicana
ENSORLG00020012904	rbm8a	85	95.000	ENSPREG00000017572	rbm8a	100	95.000	Poecilia_reticulata
ENSORLG00020012904	rbm8a	80	89.404	ENSPPYG00000000929	RBM8A	92	89.375	Pongo_abelii
ENSORLG00020012904	rbm8a	82	89.032	ENSPCAG00000002146	-	92	88.750	Procavia_capensis
ENSORLG00020012904	rbm8a	80	89.404	ENSPCOG00000022886	RBM8A	92	89.375	Propithecus_coquereli
ENSORLG00020012904	rbm8a	80	89.404	ENSPVAG00000014471	RBM8A	92	89.375	Pteropus_vampyrus
ENSORLG00020012904	rbm8a	84	94.937	ENSPNYG00000013564	rbm8a	91	95.000	Pundamilia_nyererei
ENSORLG00020012904	rbm8a	82	94.839	ENSPNAG00000028502	rbm8a	92	94.375	Pygocentrus_nattereri
ENSORLG00020012904	rbm8a	80	89.404	ENSRNOG00000021215	Rbm8a	92	89.375	Rattus_norvegicus
ENSORLG00020012904	rbm8a	80	89.404	ENSRBIG00000039233	RBM8A	92	89.375	Rhinopithecus_bieti
ENSORLG00020012904	rbm8a	80	84.768	ENSRROG00000033023	-	92	84.375	Rhinopithecus_roxellana
ENSORLG00020012904	rbm8a	80	89.404	ENSRROG00000040324	-	92	89.375	Rhinopithecus_roxellana
ENSORLG00020012904	rbm8a	80	89.404	ENSSBOG00000031316	RBM8A	92	89.375	Saimiri_boliviensis_boliviensis
ENSORLG00020012904	rbm8a	80	88.742	ENSSHAG00000018629	RBM8A	92	88.750	Sarcophilus_harrisii
ENSORLG00020012904	rbm8a	82	94.194	ENSSFOG00015009007	rbm8a	92	93.750	Scleropages_formosus
ENSORLG00020012904	rbm8a	82	92.903	ENSSFOG00015024171	rbm8a	92	91.875	Scleropages_formosus
ENSORLG00020012904	rbm8a	84	95.570	ENSSMAG00000012998	rbm8a	91	95.625	Scophthalmus_maximus
ENSORLG00020012904	rbm8a	84	95.570	ENSSDUG00000005911	rbm8a	91	95.625	Seriola_dumerili
ENSORLG00020012904	rbm8a	84	95.570	ENSSLDG00000011664	rbm8a	91	95.625	Seriola_lalandi_dorsalis
ENSORLG00020012904	rbm8a	80	89.404	ENSSARG00000013289	RBM8A	92	89.375	Sorex_araneus
ENSORLG00020012904	rbm8a	80	90.066	ENSSPUG00000001576	RBM8A	92	90.000	Sphenodon_punctatus
ENSORLG00020012904	rbm8a	84	95.570	ENSSPAG00000012181	rbm8a	91	95.625	Stegastes_partitus
ENSORLG00020012904	rbm8a	80	89.404	ENSSSCG00000028509	RBM8A	92	89.375	Sus_scrofa
ENSORLG00020012904	rbm8a	80	88.079	ENSTGUG00000004447	RBM8A	92	88.125	Taeniopygia_guttata
ENSORLG00020012904	rbm8a	84	93.038	ENSTRUG00000013173	rbm8a	91	93.125	Takifugu_rubripes
ENSORLG00020012904	rbm8a	84	91.772	ENSTNIG00000006869	rbm8a	91	91.875	Tetraodon_nigroviridis
ENSORLG00020012904	rbm8a	61	89.474	ENSTBEG00000014947	RBM8A	100	89.474	Tupaia_belangeri
ENSORLG00020012904	rbm8a	68	88.281	ENSTTRG00000009081	RBM8A	91	88.321	Tursiops_truncatus
ENSORLG00020012904	rbm8a	80	89.404	ENSUAMG00000021929	RBM8A	92	89.375	Ursus_americanus
ENSORLG00020012904	rbm8a	80	89.404	ENSUMAG00000010298	RBM8A	92	89.375	Ursus_maritimus
ENSORLG00020012904	rbm8a	80	89.404	ENSVVUG00000007486	RBM8A	92	89.375	Vulpes_vulpes
ENSORLG00020012904	rbm8a	84	94.937	ENSXCOG00000004369	rbm8a	91	95.000	Xiphophorus_couchianus
ENSORLG00020012904	rbm8a	84	94.937	ENSXMAG00000013463	rbm8a	100	93.750	Xiphophorus_maculatus