EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020013187 (Gene tree)
Gene ID: -
Gene Symbol: rbm19
Alias: -
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 21849 bases
Position: chr9:12782930-12804778
Accession: ZDB-GENE-031125-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020012237	RRM_1	PF00076.22	9.4e-85	1	6
ENSORLP00020012237	RRM_1	PF00076.22	9.4e-85	2	6
ENSORLP00020012237	RRM_1	PF00076.22	9.4e-85	3	6
ENSORLP00020012237	RRM_1	PF00076.22	9.4e-85	4	6
ENSORLP00020012237	RRM_1	PF00076.22	9.4e-85	5	6
ENSORLP00020012237	RRM_1	PF00076.22	9.4e-85	6	6
ENSORLP00020029284	RRM_1	PF00076.22	9.4e-85	1	6
ENSORLP00020029284	RRM_1	PF00076.22	9.4e-85	2	6
ENSORLP00020029284	RRM_1	PF00076.22	9.4e-85	3	6
ENSORLP00020029284	RRM_1	PF00076.22	9.4e-85	4	6
ENSORLP00020029284	RRM_1	PF00076.22	9.4e-85	5	6
ENSORLP00020029284	RRM_1	PF00076.22	9.4e-85	6	6
ENSORLP00020012203	RRM_1	PF00076.22	9.4e-85	1	6
ENSORLP00020012203	RRM_1	PF00076.22	9.4e-85	2	6
ENSORLP00020012203	RRM_1	PF00076.22	9.4e-85	3	6
ENSORLP00020012203	RRM_1	PF00076.22	9.4e-85	4	6
ENSORLP00020012203	RRM_1	PF00076.22	9.4e-85	5	6
ENSORLP00020012203	RRM_1	PF00076.22	9.4e-85	6	6
ENSORLP00020012168	RRM_1	PF00076.22	6e-81	1	6
ENSORLP00020012168	RRM_1	PF00076.22	6e-81	2	6
ENSORLP00020012168	RRM_1	PF00076.22	6e-81	3	6
ENSORLP00020012168	RRM_1	PF00076.22	6e-81	4	6
ENSORLP00020012168	RRM_1	PF00076.22	6e-81	5	6
ENSORLP00020012168	RRM_1	PF00076.22	6e-81	6	6
ENSORLP00020029188	RRM_1	PF00076.22	7.3e-81	1	6
ENSORLP00020029188	RRM_1	PF00076.22	7.3e-81	2	6
ENSORLP00020029188	RRM_1	PF00076.22	7.3e-81	3	6
ENSORLP00020029188	RRM_1	PF00076.22	7.3e-81	4	6
ENSORLP00020029188	RRM_1	PF00076.22	7.3e-81	5	6
ENSORLP00020029188	RRM_1	PF00076.22	7.3e-81	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020019281	-	3327	-	ENSORLP00020012203	907 (aa)	-	-
ENSORLT00020019245	-	3549	-	ENSORLP00020012168	895 (aa)	-	-
ENSORLT00020019192	-	3430	-	ENSORLP00020029188	918 (aa)	-	-
ENSORLT00020019367	-	3327	-	ENSORLP00020029284	907 (aa)	-	-
ENSORLT00020032117	-	3327	-	ENSORLP00020012237	907 (aa)	-	-

Gene Model

Click here to download ENSORLG00020013187's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020013187's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020013187	rbm19	59	33.333	ENSORLG00020022398	pabpc1a	58	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020013187	rbm19	99	58.368	ENSG00000122965	RBM19	85	74.737	Homo_sapiens
ENSORLG00020013187	rbm19	100	80.043	ENSAPOG00000010507	rbm19	99	80.906	Acanthochromis_polyacanthus
ENSORLG00020013187	rbm19	99	56.649	ENSAMEG00000008544	RBM19	97	56.844	Ailuropoda_melanoleuca
ENSORLG00020013187	rbm19	99	80.921	ENSACIG00000017780	rbm19	99	80.677	Amphilophus_citrinellus
ENSORLG00020013187	rbm19	100	81.622	ENSAOCG00000008554	rbm19	99	81.405	Amphiprion_ocellaris
ENSORLG00020013187	rbm19	99	79.521	ENSAPEG00000022381	rbm19	97	79.672	Amphiprion_percula
ENSORLG00020013187	rbm19	100	78.687	ENSATEG00000007000	rbm19	99	78.364	Anabas_testudineus
ENSORLG00020013187	rbm19	100	56.236	ENSAPLG00000015319	RBM19	99	56.100	Anas_platyrhynchos
ENSORLG00020013187	rbm19	100	56.996	ENSACAG00000005065	RBM19	98	56.481	Anolis_carolinensis
ENSORLG00020013187	rbm19	99	58.595	ENSANAG00000024136	RBM19	97	58.639	Aotus_nancymaae
ENSORLG00020013187	rbm19	100	72.993	ENSACLG00000001399	rbm19	99	72.541	Astatotilapia_calliptera
ENSORLG00020013187	rbm19	65	71.119	ENSAMXG00000017073	rbm19	98	61.463	Astyanax_mexicanus
ENSORLG00020013187	rbm19	99	57.794	ENSBTAG00000031824	RBM19	97	57.850	Bos_taurus
ENSORLG00020013187	rbm19	80	47.312	WBGene00004315	rbd-1	92	46.316	Caenorhabditis_elegans
ENSORLG00020013187	rbm19	99	58.115	ENSCJAG00000009798	RBM19	97	57.720	Callithrix_jacchus
ENSORLG00020013187	rbm19	99	57.592	ENSCAFG00000009146	RBM19	97	56.625	Canis_familiaris
ENSORLG00020013187	rbm19	99	57.696	ENSCAFG00020017862	RBM19	97	56.729	Canis_lupus_dingo
ENSORLG00020013187	rbm19	99	57.656	ENSCHIG00000014917	RBM19	97	57.878	Capra_hircus
ENSORLG00020013187	rbm19	91	56.477	ENSTSYG00000007207	RBM19	96	56.399	Carlito_syrichta
ENSORLG00020013187	rbm19	99	57.900	ENSCAPG00000006869	RBM19	97	57.945	Cavia_aperea
ENSORLG00020013187	rbm19	99	58.040	ENSCPOG00000026629	RBM19	97	58.610	Cavia_porcellus
ENSORLG00020013187	rbm19	99	58.010	ENSCCAG00000021665	-	97	58.455	Cebus_capucinus
ENSORLG00020013187	rbm19	97	52.068	ENSCCAG00000026637	-	99	51.013	Cebus_capucinus
ENSORLG00020013187	rbm19	99	58.034	ENSCATG00000035841	RBM19	99	57.660	Cercocebus_atys
ENSORLG00020013187	rbm19	99	56.373	ENSCLAG00000009965	RBM19	97	57.084	Chinchilla_lanigera
ENSORLG00020013187	rbm19	99	71.429	ENSCSAG00000002352	RBM19	93	71.429	Chlorocebus_sabaeus
ENSORLG00020013187	rbm19	99	61.170	ENSCPBG00000011990	RBM19	98	60.127	Chrysemys_picta_bellii
ENSORLG00020013187	rbm19	79	52.960	ENSCING00000023076	-	96	52.582	Ciona_intestinalis
ENSORLG00020013187	rbm19	99	58.577	ENSCANG00000035927	RBM19	97	58.455	Colobus_angolensis_palliatus
ENSORLG00020013187	rbm19	99	57.173	ENSCGRG00001000323	Rbm19	97	57.471	Cricetulus_griseus_chok1gshd
ENSORLG00020013187	rbm19	99	57.173	ENSCGRG00000010371	Rbm19	97	57.471	Cricetulus_griseus_crigri
ENSORLG00020013187	rbm19	99	75.163	ENSCSEG00000017436	rbm19	99	74.707	Cynoglossus_semilaevis
ENSORLG00020013187	rbm19	100	75.488	ENSCVAG00000000300	rbm19	99	75.271	Cyprinodon_variegatus
ENSORLG00020013187	rbm19	99	65.203	ENSDARG00000042590	rbm19	98	64.819	Danio_rerio
ENSORLG00020013187	rbm19	99	56.917	ENSDNOG00000024534	RBM19	94	57.534	Dasypus_novemcinctus
ENSORLG00020013187	rbm19	99	57.309	ENSDORG00000008549	Rbm19	100	56.992	Dipodomys_ordii
ENSORLG00020013187	rbm19	99	38.906	FBgn0036018	CG3335	97	38.120	Drosophila_melanogaster
ENSORLG00020013187	rbm19	83	76.812	ENSETEG00000016887	-	56	76.471	Echinops_telfairi
ENSORLG00020013187	rbm19	82	43.233	ENSEBUG00000008521	-	94	43.300	Eptatretus_burgeri
ENSORLG00020013187	rbm19	99	57.368	ENSEASG00005009452	RBM19	97	57.458	Equus_asinus_asinus
ENSORLG00020013187	rbm19	99	57.576	ENSECAG00000023716	RBM19	98	57.351	Equus_caballus
ENSORLG00020013187	rbm19	99	70.640	ENSELUG00000012561	rbm19	99	69.793	Esox_lucius
ENSORLG00020013187	rbm19	99	58.289	ENSFCAG00000002962	RBM19	96	57.773	Felis_catus
ENSORLG00020013187	rbm19	99	59.979	ENSFALG00000007768	RBM19	98	58.289	Ficedula_albicollis
ENSORLG00020013187	rbm19	99	57.563	ENSFDAG00000004629	RBM19	97	57.518	Fukomys_damarensis
ENSORLG00020013187	rbm19	99	76.018	ENSFHEG00000012578	rbm19	99	74.540	Fundulus_heteroclitus
ENSORLG00020013187	rbm19	99	68.087	ENSGMOG00000013120	rbm19	100	67.467	Gadus_morhua
ENSORLG00020013187	rbm19	99	59.894	ENSGALG00000008289	RBM19	98	58.585	Gallus_gallus
ENSORLG00020013187	rbm19	99	77.178	ENSGAFG00000012337	rbm19	99	75.676	Gambusia_affinis
ENSORLG00020013187	rbm19	99	77.405	ENSGACG00000009462	rbm19	100	77.297	Gasterosteus_aculeatus
ENSORLG00020013187	rbm19	61	68.206	ENSGAGG00000019457	RBM19	99	66.952	Gopherus_agassizii
ENSORLG00020013187	rbm19	99	57.906	ENSGGOG00000007371	RBM19	97	57.950	Gorilla_gorilla
ENSORLG00020013187	rbm19	100	75.870	ENSHBUG00000009047	rbm19	99	75.922	Haplochromis_burtoni
ENSORLG00020013187	rbm19	99	57.757	ENSHGLG00000010899	RBM19	97	57.979	Heterocephalus_glaber_female
ENSORLG00020013187	rbm19	99	57.158	ENSHGLG00100017936	RBM19	97	57.368	Heterocephalus_glaber_male
ENSORLG00020013187	rbm19	99	75.573	ENSHCOG00000016446	rbm19	98	75.162	Hippocampus_comes
ENSORLG00020013187	rbm19	99	64.920	ENSIPUG00000023849	rbm19	98	65.245	Ictalurus_punctatus
ENSORLG00020013187	rbm19	99	79.367	ENSKMAG00000014807	rbm19	99	78.448	Kryptolebias_marmoratus
ENSORLG00020013187	rbm19	100	77.909	ENSLBEG00000012897	rbm19	99	77.909	Labrus_bergylta
ENSORLG00020013187	rbm19	73	59.225	ENSLACG00000012030	RBM19	94	61.047	Latimeria_chalumnae
ENSORLG00020013187	rbm19	99	65.217	ENSLOCG00000008341	rbm19	98	64.332	Lepisosteus_oculatus
ENSORLG00020013187	rbm19	91	55.517	ENSLAFG00000004187	RBM19	100	55.632	Loxodonta_africana
ENSORLG00020013187	rbm19	99	58.559	ENSMFAG00000046091	RBM19	97	57.476	Macaca_fascicularis
ENSORLG00020013187	rbm19	99	58.664	ENSMMUG00000010496	RBM19	97	58.559	Macaca_mulatta
ENSORLG00020013187	rbm19	99	55.037	ENSMNEG00000028452	RBM19	99	55.747	Macaca_nemestrina
ENSORLG00020013187	rbm19	99	57.604	ENSMLEG00000034550	RBM19	97	56.535	Mandrillus_leucophaeus
ENSORLG00020013187	rbm19	100	79.784	ENSMAMG00000014397	rbm19	99	79.459	Mastacembelus_armatus
ENSORLG00020013187	rbm19	100	79.022	ENSMZEG00005016607	rbm19	99	79.348	Maylandia_zebra
ENSORLG00020013187	rbm19	99	52.793	ENSMGAG00000010087	RBM19	99	52.524	Meleagris_gallopavo
ENSORLG00020013187	rbm19	99	57.579	ENSMAUG00000019290	Rbm19	97	58.588	Mesocricetus_auratus
ENSORLG00020013187	rbm19	99	58.017	ENSMICG00000014423	RBM19	97	58.848	Microcebus_murinus
ENSORLG00020013187	rbm19	99	74.864	ENSMMOG00000017839	rbm19	98	73.894	Mola_mola
ENSORLG00020013187	rbm19	99	59.164	ENSMODG00000003597	RBM19	98	58.166	Monodelphis_domestica
ENSORLG00020013187	rbm19	100	77.081	ENSMALG00000012647	rbm19	99	76.973	Monopterus_albus
ENSORLG00020013187	rbm19	99	57.822	MGP_CAROLIEiJ_G0027656	Rbm19	99	56.982	Mus_caroli
ENSORLG00020013187	rbm19	99	57.309	ENSMUSG00000029594	Rbm19	99	56.757	Mus_musculus
ENSORLG00020013187	rbm19	99	58.023	MGP_PahariEiJ_G0024238	Rbm19	99	57.336	Mus_pahari
ENSORLG00020013187	rbm19	99	58.157	MGP_SPRETEiJ_G0028656	Rbm19	98	57.664	Mus_spretus
ENSORLG00020013187	rbm19	99	56.816	ENSMPUG00000002694	RBM19	97	56.070	Mustela_putorius_furo
ENSORLG00020013187	rbm19	99	57.927	ENSMLUG00000015075	RBM19	97	57.261	Myotis_lucifugus
ENSORLG00020013187	rbm19	99	57.113	ENSNGAG00000009076	Rbm19	97	57.474	Nannospalax_galili
ENSORLG00020013187	rbm19	99	78.564	ENSNBRG00000005913	rbm19	98	78.564	Neolamprologus_brichardi
ENSORLG00020013187	rbm19	99	58.264	ENSNLEG00000000190	RBM19	97	58.142	Nomascus_leucogenys
ENSORLG00020013187	rbm19	100	49.738	ENSMEUG00000004045	RBM19	89	60.000	Notamacropus_eugenii
ENSORLG00020013187	rbm19	99	57.534	ENSOPRG00000012064	RBM19	97	58.054	Ochotona_princeps
ENSORLG00020013187	rbm19	99	57.065	ENSODEG00000012977	RBM19	97	57.035	Octodon_degus
ENSORLG00020013187	rbm19	99	76.915	ENSONIG00000013576	rbm19	100	81.111	Oreochromis_niloticus
ENSORLG00020013187	rbm19	99	57.956	ENSOCUG00000009398	RBM19	98	57.336	Oryctolagus_cuniculus
ENSORLG00020013187	rbm19	100	97.654	ENSORLG00000008077	rbm19	100	97.574	Oryzias_latipes
ENSORLG00020013187	rbm19	100	97.603	ENSORLG00015001774	rbm19	99	97.603	Oryzias_latipes_hsok
ENSORLG00020013187	rbm19	100	90.879	ENSOMEG00000003334	rbm19	99	90.771	Oryzias_melastigma
ENSORLG00020013187	rbm19	91	54.926	ENSOGAG00000000602	RBM19	100	55.668	Otolemur_garnettii
ENSORLG00020013187	rbm19	99	57.611	ENSOARG00000006827	RBM19	97	57.973	Ovis_aries
ENSORLG00020013187	rbm19	99	58.498	ENSPPAG00000043712	RBM19	97	58.394	Pan_paniscus
ENSORLG00020013187	rbm19	99	57.518	ENSPPRG00000023027	RBM19	96	57.503	Panthera_pardus
ENSORLG00020013187	rbm19	99	53.862	ENSPTIG00000011096	RBM19	97	53.659	Panthera_tigris_altaica
ENSORLG00020013187	rbm19	99	58.498	ENSPTRG00000005494	RBM19	97	58.098	Pan_troglodytes
ENSORLG00020013187	rbm19	99	60.140	ENSPANG00000004795	RBM19	97	56.913	Papio_anubis
ENSORLG00020013187	rbm19	99	66.079	ENSPKIG00000017095	rbm19	97	65.472	Paramormyrops_kingsleyae
ENSORLG00020013187	rbm19	92	56.716	ENSPSIG00000008191	RBM19	99	57.274	Pelodiscus_sinensis
ENSORLG00020013187	rbm19	88	78.120	ENSPMGG00000019087	rbm19	99	76.688	Periophthalmus_magnuspinnatus
ENSORLG00020013187	rbm19	99	57.308	ENSPEMG00000018058	Rbm19	97	57.007	Peromyscus_maniculatus_bairdii
ENSORLG00020013187	rbm19	100	57.335	ENSPCIG00000028861	RBM19	99	57.613	Phascolarctos_cinereus
ENSORLG00020013187	rbm19	99	78.634	ENSPFOG00000015300	rbm19	99	78.007	Poecilia_formosa
ENSORLG00020013187	rbm19	99	78.965	ENSPLAG00000000059	rbm19	99	77.898	Poecilia_latipinna
ENSORLG00020013187	rbm19	99	79.006	ENSPMEG00000018585	rbm19	99	78.152	Poecilia_mexicana
ENSORLG00020013187	rbm19	99	78.855	ENSPREG00000000978	rbm19	99	77.898	Poecilia_reticulata
ENSORLG00020013187	rbm19	99	56.472	ENSPPYG00000004993	RBM19	97	57.053	Pongo_abelii
ENSORLG00020013187	rbm19	72	66.502	ENSPCAG00000005063	-	56	66.502	Procavia_capensis
ENSORLG00020013187	rbm19	99	58.211	ENSPCOG00000016190	RBM19	97	58.298	Propithecus_coquereli
ENSORLG00020013187	rbm19	99	56.549	ENSPVAG00000011618	RBM19	98	55.670	Pteropus_vampyrus
ENSORLG00020013187	rbm19	100	76.099	ENSPNYG00000017434	rbm19	99	76.389	Pundamilia_nyererei
ENSORLG00020013187	rbm19	99	65.488	ENSPNAG00000012069	rbm19	97	65.385	Pygocentrus_nattereri
ENSORLG00020013187	rbm19	99	57.476	ENSRNOG00000001397	Rbm19	97	58.307	Rattus_norvegicus
ENSORLG00020013187	rbm19	99	58.368	ENSRBIG00000041419	RBM19	97	57.531	Rhinopithecus_bieti
ENSORLG00020013187	rbm19	99	58.159	ENSRROG00000031938	RBM19	97	58.159	Rhinopithecus_roxellana
ENSORLG00020013187	rbm19	96	37.879	YPR112C	-	72	37.660	Saccharomyces_cerevisiae
ENSORLG00020013187	rbm19	99	56.021	ENSSBOG00000021434	-	97	56.590	Saimiri_boliviensis_boliviensis
ENSORLG00020013187	rbm19	90	50.814	ENSSBOG00000022679	-	99	50.000	Saimiri_boliviensis_boliviensis
ENSORLG00020013187	rbm19	100	57.400	ENSSHAG00000012256	RBM19	98	57.608	Sarcophilus_harrisii
ENSORLG00020013187	rbm19	99	62.366	ENSSFOG00015005124	rbm19	98	62.043	Scleropages_formosus
ENSORLG00020013187	rbm19	100	78.219	ENSSMAG00000011828	rbm19	99	78.433	Scophthalmus_maximus
ENSORLG00020013187	rbm19	100	81.107	ENSSDUG00000013544	rbm19	99	81.868	Seriola_dumerili
ENSORLG00020013187	rbm19	88	83.840	ENSSLDG00000025413	rbm19	93	83.654	Seriola_lalandi_dorsalis
ENSORLG00020013187	rbm19	63	67.770	ENSSPUG00000011064	RBM19	100	66.838	Sphenodon_punctatus
ENSORLG00020013187	rbm19	99	76.123	ENSSPAG00000018685	rbm19	99	76.688	Stegastes_partitus
ENSORLG00020013187	rbm19	99	59.468	ENSSSCG00000009868	RBM19	97	59.342	Sus_scrofa
ENSORLG00020013187	rbm19	99	59.809	ENSTGUG00000009017	RBM19	98	58.929	Taeniopygia_guttata
ENSORLG00020013187	rbm19	99	75.517	ENSTRUG00000016032	rbm19	98	74.839	Takifugu_rubripes
ENSORLG00020013187	rbm19	73	78.689	ENSTBEG00000000703	RBM19	69	78.689	Tupaia_belangeri
ENSORLG00020013187	rbm19	89	60.145	ENSTTRG00000003987	RBM19	82	60.870	Tursiops_truncatus
ENSORLG00020013187	rbm19	99	56.748	ENSUAMG00000002076	RBM19	98	57.291	Ursus_americanus
ENSORLG00020013187	rbm19	99	57.128	ENSUMAG00000010816	RBM19	98	57.917	Ursus_maritimus
ENSORLG00020013187	rbm19	99	57.664	ENSVVUG00000007886	RBM19	97	56.966	Vulpes_vulpes
ENSORLG00020013187	rbm19	99	58.155	ENSXETG00000017668	rbm19	99	56.674	Xenopus_tropicalis
ENSORLG00020013187	rbm19	99	76.030	ENSXCOG00000016995	rbm19	99	75.053	Xiphophorus_couchianus
ENSORLG00020013187	rbm19	99	79.185	ENSXMAG00000007641	rbm19	99	78.463	Xiphophorus_maculatus