EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020013257 (Gene tree)
Gene ID: -
Gene Symbol: rc3h2
Alias: -
Full Name: roquin-2
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 27019 bases
Position: chr12:14451856-14478874
Accession: 101170530
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020012309	zf-CCCH	PF00642.24	7.2e-06	1	1
ENSORLP00020029338	zf-CCCH	PF00642.24	7.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020032157	-	7621	XM_023960699	ENSORLP00020012309	1143 (aa)	XP_023816467	-
ENSORLT00020019470	-	7688	XM_023960698	ENSORLP00020029338	1143 (aa)	XP_023816466	-

Gene Model

Click here to download ENSORLG00020013257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020013257's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020013257	rc3h2	92	56.256	ENSG00000056586	RC3H2	94	87.528	Homo_sapiens
ENSORLG00020013257	rc3h2	100	84.097	ENSAPOG00000002117	rc3h2	100	84.183	Acanthochromis_polyacanthus
ENSORLG00020013257	rc3h2	92	56.483	ENSAMEG00000006498	RC3H2	91	56.394	Ailuropoda_melanoleuca
ENSORLG00020013257	rc3h2	100	84.183	ENSAPEG00000007757	rc3h2	100	84.270	Amphiprion_percula
ENSORLG00020013257	rc3h2	100	81.629	ENSATEG00000019414	rc3h2	100	81.629	Anabas_testudineus
ENSORLG00020013257	rc3h2	92	56.217	ENSAPLG00000013920	RC3H2	91	56.294	Anas_platyrhynchos
ENSORLG00020013257	rc3h2	92	56.306	ENSANAG00000030862	RC3H2	94	87.528	Aotus_nancymaae
ENSORLG00020013257	rc3h2	100	80.463	ENSACLG00000023136	rc3h2	100	80.463	Astatotilapia_calliptera
ENSORLG00020013257	rc3h2	95	65.554	ENSAMXG00000006778	rc3h2	100	66.787	Astyanax_mexicanus
ENSORLG00020013257	rc3h2	92	56.456	ENSBTAG00000023867	RC3H2	91	56.584	Bos_taurus
ENSORLG00020013257	rc3h2	92	56.306	ENSCJAG00000020050	RC3H2	94	87.528	Callithrix_jacchus
ENSORLG00020013257	rc3h2	92	56.444	ENSCAFG00020015288	RC3H2	94	87.528	Canis_lupus_dingo
ENSORLG00020013257	rc3h2	91	57.380	ENSCHIG00000019319	RC3H2	90	57.512	Capra_hircus
ENSORLG00020013257	rc3h2	84	50.839	ENSCAPG00000017086	RC3H2	93	50.442	Cavia_aperea
ENSORLG00020013257	rc3h2	92	56.367	ENSCPOG00000008511	RC3H2	91	56.189	Cavia_porcellus
ENSORLG00020013257	rc3h2	91	57.696	ENSCCAG00000001404	RC3H2	94	87.528	Cebus_capucinus
ENSORLG00020013257	rc3h2	92	56.256	ENSCATG00000036655	RC3H2	94	87.528	Cercocebus_atys
ENSORLG00020013257	rc3h2	92	56.495	ENSCLAG00000013261	RC3H2	91	56.317	Chinchilla_lanigera
ENSORLG00020013257	rc3h2	80	53.307	ENSCSAG00000013416	RC3H2	90	53.260	Chlorocebus_sabaeus
ENSORLG00020013257	rc3h2	92	55.893	ENSCPBG00000009811	RC3H2	91	56.000	Chrysemys_picta_bellii
ENSORLG00020013257	rc3h2	92	56.256	ENSCANG00000043140	RC3H2	94	87.528	Colobus_angolensis_palliatus
ENSORLG00020013257	rc3h2	93	55.908	ENSCGRG00001010006	Rc3h2	92	55.908	Cricetulus_griseus_chok1gshd
ENSORLG00020013257	rc3h2	71	62.692	ENSCGRG00000009255	Rc3h2	77	62.722	Cricetulus_griseus_crigri
ENSORLG00020013257	rc3h2	100	77.370	ENSCSEG00000017460	rc3h2	100	77.370	Cynoglossus_semilaevis
ENSORLG00020013257	rc3h2	99	76.696	ENSCVAG00000012202	rc3h2	100	76.957	Cyprinodon_variegatus
ENSORLG00020013257	rc3h2	99	61.242	ENSDARG00000063050	rc3h2	100	61.217	Danio_rerio
ENSORLG00020013257	rc3h2	92	56.178	ENSDNOG00000014557	RC3H2	91	56.267	Dasypus_novemcinctus
ENSORLG00020013257	rc3h2	93	56.211	ENSDORG00000006398	Rc3h2	92	56.388	Dipodomys_ordii
ENSORLG00020013257	rc3h2	92	56.187	ENSEASG00005020897	RC3H2	94	82.851	Equus_asinus_asinus
ENSORLG00020013257	rc3h2	92	56.851	ENSECAG00000022176	RC3H2	91	56.495	Equus_caballus
ENSORLG00020013257	rc3h2	100	67.959	ENSELUG00000006105	rc3h2	100	68.217	Esox_lucius
ENSORLG00020013257	rc3h2	92	56.584	ENSFCAG00000007375	RC3H2	91	56.495	Felis_catus
ENSORLG00020013257	rc3h2	92	56.071	ENSFALG00000002011	RC3H2	91	56.150	Ficedula_albicollis
ENSORLG00020013257	rc3h2	92	56.723	ENSFDAG00000012477	RC3H2	91	56.278	Fukomys_damarensis
ENSORLG00020013257	rc3h2	99	77.217	ENSFHEG00000012272	rc3h2	100	77.257	Fundulus_heteroclitus
ENSORLG00020013257	rc3h2	68	67.544	ENSGMOG00000016709	-	99	68.045	Gadus_morhua
ENSORLG00020013257	rc3h2	92	56.595	ENSGALG00000001253	RC3H2	91	56.673	Gallus_gallus
ENSORLG00020013257	rc3h2	96	77.899	ENSGAFG00000007679	rc3h2	100	77.899	Gambusia_affinis
ENSORLG00020013257	rc3h2	74	77.778	ENSGACG00000017369	rc3h2	100	95.249	Gasterosteus_aculeatus
ENSORLG00020013257	rc3h2	92	56.167	ENSGAGG00000018295	RC3H2	98	56.619	Gopherus_agassizii
ENSORLG00020013257	rc3h2	92	56.256	ENSGGOG00000017062	RC3H2	94	87.528	Gorilla_gorilla
ENSORLG00020013257	rc3h2	100	81.629	ENSHBUG00000003976	rc3h2	100	81.629	Haplochromis_burtoni
ENSORLG00020013257	rc3h2	92	56.406	ENSHGLG00100018015	RC3H2	91	56.228	Heterocephalus_glaber_male
ENSORLG00020013257	rc3h2	100	71.891	ENSHCOG00000003006	rc3h2	100	71.830	Hippocampus_comes
ENSORLG00020013257	rc3h2	100	56.775	ENSIPUG00000021433	rc3h2	100	58.032	Ictalurus_punctatus
ENSORLG00020013257	rc3h2	92	56.812	ENSSTOG00000010655	RC3H2	91	56.367	Ictidomys_tridecemlineatus
ENSORLG00020013257	rc3h2	92	56.646	ENSJJAG00000022376	Rc3h2	91	56.378	Jaculus_jaculus
ENSORLG00020013257	rc3h2	100	76.903	ENSKMAG00000010936	rc3h2	100	77.163	Kryptolebias_marmoratus
ENSORLG00020013257	rc3h2	99	55.556	ENSLOCG00000002894	rc3h2	96	56.399	Lepisosteus_oculatus
ENSORLG00020013257	rc3h2	92	56.472	ENSLAFG00000003521	RC3H2	91	56.206	Loxodonta_africana
ENSORLG00020013257	rc3h2	87	87.330	ENSMFAG00000035621	RC3H2	94	87.528	Macaca_fascicularis
ENSORLG00020013257	rc3h2	92	56.356	ENSMMUG00000021134	RC3H2	94	87.528	Macaca_mulatta
ENSORLG00020013257	rc3h2	92	56.256	ENSMNEG00000031599	RC3H2	94	85.301	Macaca_nemestrina
ENSORLG00020013257	rc3h2	92	56.356	ENSMLEG00000033809	RC3H2	94	87.528	Mandrillus_leucophaeus
ENSORLG00020013257	rc3h2	100	81.629	ENSMZEG00005017019	rc3h2	100	81.629	Maylandia_zebra
ENSORLG00020013257	rc3h2	92	56.117	ENSMGAG00000007984	RC3H2	91	56.195	Meleagris_gallopavo
ENSORLG00020013257	rc3h2	74	61.514	ENSMAUG00000003117	Rc3h2	83	61.093	Mesocricetus_auratus
ENSORLG00020013257	rc3h2	92	56.050	ENSMICG00000003227	RC3H2	94	87.305	Microcebus_murinus
ENSORLG00020013257	rc3h2	92	56.467	ENSMOCG00000009592	Rc3h2	91	56.289	Microtus_ochrogaster
ENSORLG00020013257	rc3h2	84	93.418	ENSMMOG00000021305	rc3h2	99	93.418	Mola_mola
ENSORLG00020013257	rc3h2	92	56.433	ENSMODG00000019725	RC3H2	76	56.560	Monodelphis_domestica
ENSORLG00020013257	rc3h2	92	57.038	MGP_CAROLIEiJ_G0023516	Rc3h2	94	87.361	Mus_caroli
ENSORLG00020013257	rc3h2	92	56.317	ENSMUSG00000075376	Rc3h2	94	87.361	Mus_musculus
ENSORLG00020013257	rc3h2	92	56.317	MGP_PahariEiJ_G0024969	Rc3h2	94	87.361	Mus_pahari
ENSORLG00020013257	rc3h2	92	56.228	MGP_SPRETEiJ_G0024436	Rc3h2	94	87.361	Mus_spretus
ENSORLG00020013257	rc3h2	92	56.673	ENSMPUG00000014141	RC3H2	91	56.584	Mustela_putorius_furo
ENSORLG00020013257	rc3h2	92	56.495	ENSMLUG00000013992	RC3H2	91	56.444	Myotis_lucifugus
ENSORLG00020013257	rc3h2	100	81.629	ENSNBRG00000009276	rc3h2	100	81.629	Neolamprologus_brichardi
ENSORLG00020013257	rc3h2	92	55.841	ENSNLEG00000017204	RC3H2	94	87.528	Nomascus_leucogenys
ENSORLG00020013257	rc3h2	54	87.747	ENSMEUG00000001299	-	55	87.747	Notamacropus_eugenii
ENSORLG00020013257	rc3h2	68	56.807	ENSOPRG00000000135	RC3H2	74	57.231	Ochotona_princeps
ENSORLG00020013257	rc3h2	100	80.805	ENSONIG00000003945	rc3h2	100	80.805	Oreochromis_niloticus
ENSORLG00020013257	rc3h2	91	56.670	ENSOANG00000008194	RC3H2	99	56.798	Ornithorhynchus_anatinus
ENSORLG00020013257	rc3h2	93	56.564	ENSOCUG00000008804	RC3H2	92	56.514	Oryctolagus_cuniculus
ENSORLG00020013257	rc3h2	100	98.775	ENSORLG00000010018	rc3h2	100	98.775	Oryzias_latipes
ENSORLG00020013257	rc3h2	100	98.513	ENSORLG00015001525	rc3h2	100	98.513	Oryzias_latipes_hsok
ENSORLG00020013257	rc3h2	100	94.410	ENSOMEG00000023540	rc3h2	100	94.410	Oryzias_melastigma
ENSORLG00020013257	rc3h2	92	56.394	ENSOGAG00000010678	RC3H2	91	56.128	Otolemur_garnettii
ENSORLG00020013257	rc3h2	92	56.267	ENSOARG00000013965	RC3H2	91	56.394	Ovis_aries
ENSORLG00020013257	rc3h2	92	56.256	ENSPPAG00000036013	RC3H2	94	87.528	Pan_paniscus
ENSORLG00020013257	rc3h2	92	56.483	ENSPPRG00000008698	RC3H2	97	57.792	Panthera_pardus
ENSORLG00020013257	rc3h2	92	56.483	ENSPTIG00000014257	RC3H2	97	57.792	Panthera_tigris_altaica
ENSORLG00020013257	rc3h2	92	56.256	ENSPTRG00000021339	RC3H2	94	87.528	Pan_troglodytes
ENSORLG00020013257	rc3h2	92	54.836	ENSPANG00000025840	RC3H2	94	83.964	Papio_anubis
ENSORLG00020013257	rc3h2	99	63.057	ENSPKIG00000021910	rc3h2	96	62.795	Paramormyrops_kingsleyae
ENSORLG00020013257	rc3h2	92	55.979	ENSPSIG00000005393	RC3H2	91	56.145	Pelodiscus_sinensis
ENSORLG00020013257	rc3h2	85	93.905	ENSPMGG00000023963	rc3h2	95	93.905	Periophthalmus_magnuspinnatus
ENSORLG00020013257	rc3h2	92	56.990	ENSPEMG00000023441	Rc3h2	91	56.545	Peromyscus_maniculatus_bairdii
ENSORLG00020013257	rc3h2	87	87.557	ENSPCIG00000025559	RC3H2	90	87.557	Phascolarctos_cinereus
ENSORLG00020013257	rc3h2	97	77.837	ENSPFOG00000019699	rc3h2	100	75.670	Poecilia_formosa
ENSORLG00020013257	rc3h2	91	69.245	ENSPLAG00000005799	rc3h2	97	69.436	Poecilia_latipinna
ENSORLG00020013257	rc3h2	97	77.788	ENSPMEG00000014187	rc3h2	97	77.998	Poecilia_mexicana
ENSORLG00020013257	rc3h2	99	77.807	ENSPREG00000008979	rc3h2	100	77.807	Poecilia_reticulata
ENSORLG00020013257	rc3h2	78	75.099	ENSPCAG00000010154	RC3H2	77	75.099	Procavia_capensis
ENSORLG00020013257	rc3h2	100	80.720	ENSPNYG00000012063	rc3h2	100	80.720	Pundamilia_nyererei
ENSORLG00020013257	rc3h2	96	62.320	ENSPNAG00000017502	rc3h2	96	62.276	Pygocentrus_nattereri
ENSORLG00020013257	rc3h2	92	56.278	ENSRNOG00000009196	Rc3h2	94	56.317	Rattus_norvegicus
ENSORLG00020013257	rc3h2	92	56.533	ENSRBIG00000032579	RC3H2	94	87.528	Rhinopithecus_bieti
ENSORLG00020013257	rc3h2	92	56.444	ENSRROG00000043784	RC3H2	94	87.528	Rhinopithecus_roxellana
ENSORLG00020013257	rc3h2	92	56.039	ENSSBOG00000029100	RC3H2	94	87.528	Saimiri_boliviensis_boliviensis
ENSORLG00020013257	rc3h2	92	56.422	ENSSHAG00000007498	RC3H2	91	56.372	Sarcophilus_harrisii
ENSORLG00020013257	rc3h2	100	81.443	ENSSMAG00000020048	rc3h2	100	81.615	Scophthalmus_maximus
ENSORLG00020013257	rc3h2	100	83.247	ENSSDUG00000016022	rc3h2	100	83.333	Seriola_dumerili
ENSORLG00020013257	rc3h2	100	83.074	ENSSLDG00000016070	rc3h2	100	83.161	Seriola_lalandi_dorsalis
ENSORLG00020013257	rc3h2	92	56.344	ENSSARG00000012329	RC3H2	91	56.217	Sorex_araneus
ENSORLG00020013257	rc3h2	92	56.078	ENSSPUG00000001457	RC3H2	91	55.890	Sphenodon_punctatus
ENSORLG00020013257	rc3h2	100	84.542	ENSSPAG00000005233	rc3h2	100	84.629	Stegastes_partitus
ENSORLG00020013257	rc3h2	92	56.622	ENSSSCG00000005575	RC3H2	92	87.305	Sus_scrofa
ENSORLG00020013257	rc3h2	92	56.239	ENSTGUG00000006889	-	91	56.317	Taeniopygia_guttata
ENSORLG00020013257	rc3h2	85	73.428	ENSTNIG00000004942	rc3h2	98	73.120	Tetraodon_nigroviridis
ENSORLG00020013257	rc3h2	70	62.545	ENSTBEG00000009622	RC3H2	78	62.352	Tupaia_belangeri
ENSORLG00020013257	rc3h2	85	66.536	ENSTTRG00000016954	RC3H2	84	67.188	Tursiops_truncatus
ENSORLG00020013257	rc3h2	92	56.584	ENSUAMG00000015355	RC3H2	91	56.495	Ursus_americanus
ENSORLG00020013257	rc3h2	92	56.584	ENSUMAG00000003161	RC3H2	94	87.528	Ursus_maritimus
ENSORLG00020013257	rc3h2	92	56.444	ENSVPAG00000005994	RC3H2	91	56.356	Vicugna_pacos
ENSORLG00020013257	rc3h2	92	56.444	ENSVVUG00000009519	RC3H2	94	56.317	Vulpes_vulpes
ENSORLG00020013257	rc3h2	99	68.102	ENSXCOG00000005002	rc3h2	94	95.238	Xiphophorus_couchianus
ENSORLG00020013257	rc3h2	99	77.304	ENSXMAG00000001724	rc3h2	100	77.391	Xiphophorus_maculatus