EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020013437 (Gene tree)
Gene ID: -
Gene Symbol: tufm
Alias: -
Full Name: Tu translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 7628 bases
Position: chr8:14081307-14088934
Accession: ZDB-GENE-050320-73
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020012512	GTP_EFTU	PF00009.27	3.4e-55	1	1
ENSORLP00020029466	GTP_EFTU	PF00009.27	3.5e-55	1	1
ENSORLP00020012512	GTP_EFTU_D2	PF03144.25	3.3e-15	1	1
ENSORLP00020029466	GTP_EFTU_D2	PF03144.25	3.4e-15	1	1
ENSORLP00020012512	GTP_EFTU_D3	PF03143.17	9.5e-26	1	1
ENSORLP00020029466	GTP_EFTU_D3	PF03143.17	9.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020032244	-	1402	-	ENSORLP00020012512	446 (aa)	-	-
ENSORLT00020019698	-	1353	-	ENSORLP00020029466	450 (aa)	-	-

Gene Model

Click here to download ENSORLG00020013437's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020013437's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020013437	tufm	65	39.252	ENSORLG00020018651	-	54	39.252

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020013437	tufm	92	77.427	ENSG00000178952	TUFM	99	73.673	Homo_sapiens
ENSORLG00020013437	tufm	100	95.740	ENSAPOG00000013385	tufm	100	95.740	Acanthochromis_polyacanthus
ENSORLG00020013437	tufm	96	77.283	ENSAMEG00000015551	TUFM	94	77.647	Ailuropoda_melanoleuca
ENSORLG00020013437	tufm	96	93.023	ENSACIG00000007388	tufm	98	93.023	Amphilophus_citrinellus
ENSORLG00020013437	tufm	100	95.516	ENSAOCG00000001032	tufm	100	95.516	Amphiprion_ocellaris
ENSORLG00020013437	tufm	100	95.516	ENSAPEG00000015751	tufm	100	95.516	Amphiprion_percula
ENSORLG00020013437	tufm	100	93.722	ENSATEG00000002905	tufm	97	93.722	Anabas_testudineus
ENSORLG00020013437	tufm	99	75.276	ENSACAG00000005399	TUFM	97	75.276	Anolis_carolinensis
ENSORLG00020013437	tufm	99	71.840	ENSANAG00000022206	TUFM	99	71.840	Aotus_nancymaae
ENSORLG00020013437	tufm	100	95.067	ENSACLG00000007403	tufm	93	95.067	Astatotilapia_calliptera
ENSORLG00020013437	tufm	99	74.058	ENSBTAG00000019216	TUFM	99	74.058	Bos_taurus
ENSORLG00020013437	tufm	90	57.946	WBGene00007000	tufm-1	82	57.946	Caenorhabditis_elegans
ENSORLG00020013437	tufm	99	72.284	ENSCJAG00000006236	TUFM	99	72.284	Callithrix_jacchus
ENSORLG00020013437	tufm	99	74.501	ENSCAFG00000017216	TUFM	98	75.737	Canis_familiaris
ENSORLG00020013437	tufm	99	74.501	ENSCAFG00020017574	TUFM	98	75.737	Canis_lupus_dingo
ENSORLG00020013437	tufm	99	74.279	ENSCHIG00000020583	TUFM	99	74.279	Capra_hircus
ENSORLG00020013437	tufm	100	74.558	ENSTSYG00000026053	TUFM	99	74.558	Carlito_syrichta
ENSORLG00020013437	tufm	99	74.945	ENSCPOG00000010534	TUFM	99	74.945	Cavia_porcellus
ENSORLG00020013437	tufm	99	72.062	ENSCCAG00000033296	TUFM	99	72.062	Cebus_capucinus
ENSORLG00020013437	tufm	99	73.392	ENSCATG00000035822	TUFM	99	73.392	Cercocebus_atys
ENSORLG00020013437	tufm	99	75.388	ENSCLAG00000013969	TUFM	99	75.388	Chinchilla_lanigera
ENSORLG00020013437	tufm	97	74.434	ENSCSAG00000006314	TUFM	97	74.434	Chlorocebus_sabaeus
ENSORLG00020013437	tufm	100	74.558	ENSCHOG00000009077	TUFM	99	74.558	Choloepus_hoffmanni
ENSORLG00020013437	tufm	99	77.703	ENSCPBG00000003874	TUFM	96	77.703	Chrysemys_picta_bellii
ENSORLG00020013437	tufm	97	56.036	ENSCING00000002841	-	99	56.036	Ciona_intestinalis
ENSORLG00020013437	tufm	90	59.250	ENSCSAVG00000009380	-	86	59.250	Ciona_savignyi
ENSORLG00020013437	tufm	100	73.230	ENSCANG00000035829	TUFM	99	73.230	Colobus_angolensis_palliatus
ENSORLG00020013437	tufm	99	73.392	ENSCGRG00001022949	Tufm	99	73.392	Cricetulus_griseus_chok1gshd
ENSORLG00020013437	tufm	93	52.969	ENSCGRG00000013193	-	92	52.969	Cricetulus_griseus_crigri
ENSORLG00020013437	tufm	99	73.392	ENSCGRG00000001868	-	99	73.392	Cricetulus_griseus_crigri
ENSORLG00020013437	tufm	100	87.220	ENSCSEG00000013841	tufm	100	87.220	Cynoglossus_semilaevis
ENSORLG00020013437	tufm	100	96.861	ENSCVAG00000006251	tufm	100	96.861	Cyprinodon_variegatus
ENSORLG00020013437	tufm	100	83.857	ENSDARG00000104173	tufm	99	83.857	Danio_rerio
ENSORLG00020013437	tufm	100	73.230	ENSDNOG00000047636	TUFM	99	73.230	Dasypus_novemcinctus
ENSORLG00020013437	tufm	94	62.796	ENSDORG00000023544	-	99	62.796	Dipodomys_ordii
ENSORLG00020013437	tufm	90	70.750	FBgn0024556	mEFTu1	81	70.750	Drosophila_melanogaster
ENSORLG00020013437	tufm	85	62.597	ENSETEG00000009601	TUFM	97	62.597	Echinops_telfairi
ENSORLG00020013437	tufm	94	69.718	ENSEBUG00000015907	tufm	70	70.423	Eptatretus_burgeri
ENSORLG00020013437	tufm	99	74.667	ENSEASG00005015477	TUFM	99	74.667	Equus_asinus_asinus
ENSORLG00020013437	tufm	99	74.667	ENSECAG00000019763	TUFM	98	75.737	Equus_caballus
ENSORLG00020013437	tufm	85	74.286	ENSEEUG00000001402	TUFM	97	74.286	Erinaceus_europaeus
ENSORLG00020013437	tufm	100	89.955	ENSELUG00000013410	tufm	96	89.955	Esox_lucius
ENSORLG00020013437	tufm	96	77.049	ENSFCAG00000003103	TUFM	61	77.412	Felis_catus
ENSORLG00020013437	tufm	89	72.864	ENSFDAG00000010881	TUFM	99	74.603	Fukomys_damarensis
ENSORLG00020013437	tufm	98	85.649	ENSFHEG00000020646	tufm	99	84.667	Fundulus_heteroclitus
ENSORLG00020013437	tufm	100	89.013	ENSGMOG00000014616	tufm	100	89.013	Gadus_morhua
ENSORLG00020013437	tufm	100	95.516	ENSGAFG00000004682	tufm	100	95.516	Gambusia_affinis
ENSORLG00020013437	tufm	100	91.928	ENSGACG00000012961	tufm	100	91.928	Gasterosteus_aculeatus
ENSORLG00020013437	tufm	99	78.864	ENSGAGG00000006132	TUFM	99	81.886	Gopherus_agassizii
ENSORLG00020013437	tufm	92	77.427	ENSGGOG00000014136	TUFM	99	73.673	Gorilla_gorilla
ENSORLG00020013437	tufm	100	95.516	ENSHBUG00000019031	tufm	93	95.516	Haplochromis_burtoni
ENSORLG00020013437	tufm	100	72.788	ENSHGLG00000006613	TUFM	100	72.788	Heterocephalus_glaber_female
ENSORLG00020013437	tufm	100	69.248	ENSHGLG00100004096	TUFM	100	69.248	Heterocephalus_glaber_male
ENSORLG00020013437	tufm	99	91.461	ENSHCOG00000014418	tufm	99	91.461	Hippocampus_comes
ENSORLG00020013437	tufm	100	86.099	ENSIPUG00000022457	tufm	100	86.099	Ictalurus_punctatus
ENSORLG00020013437	tufm	95	46.330	ENSIPUG00000020682	-	91	54.717	Ictalurus_punctatus
ENSORLG00020013437	tufm	99	74.945	ENSSTOG00000011837	TUFM	99	74.945	Ictidomys_tridecemlineatus
ENSORLG00020013437	tufm	99	73.274	ENSJJAG00000011840	Tufm	99	73.274	Jaculus_jaculus
ENSORLG00020013437	tufm	100	91.031	ENSKMAG00000009794	tufm	100	91.031	Kryptolebias_marmoratus
ENSORLG00020013437	tufm	100	91.480	ENSLBEG00000023735	tufm	100	91.480	Labrus_bergylta
ENSORLG00020013437	tufm	93	84.783	ENSLACG00000008242	TUFM	91	84.783	Latimeria_chalumnae
ENSORLG00020013437	tufm	99	70.925	ENSLAFG00000028911	TUFM	99	70.925	Loxodonta_africana
ENSORLG00020013437	tufm	100	73.451	ENSMFAG00000033739	TUFM	99	73.451	Macaca_fascicularis
ENSORLG00020013437	tufm	100	73.451	ENSMMUG00000003303	TUFM	99	73.451	Macaca_mulatta
ENSORLG00020013437	tufm	100	73.451	ENSMNEG00000006031	TUFM	99	73.451	Macaca_nemestrina
ENSORLG00020013437	tufm	99	73.392	ENSMLEG00000042133	TUFM	99	73.392	Mandrillus_leucophaeus
ENSORLG00020013437	tufm	100	92.601	ENSMAMG00000002053	tufm	100	92.601	Mastacembelus_armatus
ENSORLG00020013437	tufm	100	95.291	ENSMZEG00005010857	tufm	93	95.291	Maylandia_zebra
ENSORLG00020013437	tufm	99	73.836	ENSMAUG00000010490	Tufm	99	73.836	Mesocricetus_auratus
ENSORLG00020013437	tufm	99	73.451	ENSMICG00000007650	TUFM	99	73.451	Microcebus_murinus
ENSORLG00020013437	tufm	99	74.501	ENSMOCG00000010051	Tufm	99	74.501	Microtus_ochrogaster
ENSORLG00020013437	tufm	96	90.531	ENSMMOG00000012344	tufm	96	90.531	Mola_mola
ENSORLG00020013437	tufm	96	77.283	ENSMODG00000015564	TUFM	93	77.283	Monodelphis_domestica
ENSORLG00020013437	tufm	100	90.135	ENSMALG00000020254	tufm	100	90.135	Monopterus_albus
ENSORLG00020013437	tufm	99	73.836	MGP_CAROLIEiJ_G0030448	-	98	80.702	Mus_caroli
ENSORLG00020013437	tufm	99	73.836	MGP_CAROLIEiJ_G0030449	-	99	73.836	Mus_caroli
ENSORLG00020013437	tufm	99	73.836	ENSMUSG00000073838	Tufm	98	80.702	Mus_musculus
ENSORLG00020013437	tufm	99	74.058	MGP_PahariEiJ_G0013659	-	99	74.058	Mus_pahari
ENSORLG00020013437	tufm	99	74.058	MGP_PahariEiJ_G0013658	-	98	80.702	Mus_pahari
ENSORLG00020013437	tufm	99	68.443	MGP_SPRETEiJ_G0031563	-	99	68.443	Mus_spretus
ENSORLG00020013437	tufm	99	74.058	MGP_SPRETEiJ_G0031562	-	98	81.579	Mus_spretus
ENSORLG00020013437	tufm	81	78.297	ENSMPUG00000012816	TUFM	98	78.108	Mustela_putorius_furo
ENSORLG00020013437	tufm	99	72.949	ENSMLUG00000012335	-	98	74.376	Myotis_lucifugus
ENSORLG00020013437	tufm	99	74.058	ENSNGAG00000008610	Tufm	99	74.058	Nannospalax_galili
ENSORLG00020013437	tufm	100	81.839	ENSNBRG00000006466	tufm	96	95.580	Neolamprologus_brichardi
ENSORLG00020013437	tufm	100	69.095	ENSNLEG00000011063	TUFM	99	69.095	Nomascus_leucogenys
ENSORLG00020013437	tufm	78	78.963	ENSMEUG00000011131	TUFM	100	78.963	Notamacropus_eugenii
ENSORLG00020013437	tufm	99	64.062	ENSOPRG00000002318	-	97	65.079	Ochotona_princeps
ENSORLG00020013437	tufm	100	95.516	ENSONIG00000019389	tufm	100	95.516	Oreochromis_niloticus
ENSORLG00020013437	tufm	93	80.482	ENSOANG00000013114	TUFM	95	80.482	Ornithorhynchus_anatinus
ENSORLG00020013437	tufm	96	77.049	ENSOCUG00000002683	TUFM	93	77.049	Oryctolagus_cuniculus
ENSORLG00020013437	tufm	100	99.327	ENSORLG00000011497	tufm	100	99.327	Oryzias_latipes
ENSORLG00020013437	tufm	100	99.327	ENSORLG00015003107	tufm	100	99.327	Oryzias_latipes_hsok
ENSORLG00020013437	tufm	100	97.758	ENSOMEG00000016958	tufm	100	97.758	Oryzias_melastigma
ENSORLG00020013437	tufm	99	73.673	ENSOGAG00000006875	TUFM	99	73.673	Otolemur_garnettii
ENSORLG00020013437	tufm	90	78.607	ENSOARG00000002357	TUFM	97	78.607	Ovis_aries
ENSORLG00020013437	tufm	92	77.427	ENSPPAG00000035168	TUFM	99	73.451	Pan_paniscus
ENSORLG00020013437	tufm	96	77.049	ENSPPRG00000014248	TUFM	99	74.279	Panthera_pardus
ENSORLG00020013437	tufm	95	76.596	ENSPTIG00000009980	TUFM	98	77.698	Panthera_tigris_altaica
ENSORLG00020013437	tufm	92	77.427	ENSPTRG00000007939	TUFM	99	73.673	Pan_troglodytes
ENSORLG00020013437	tufm	100	73.230	ENSPANG00000019624	TUFM	99	73.230	Papio_anubis
ENSORLG00020013437	tufm	100	85.045	ENSPKIG00000023809	tufm	98	85.045	Paramormyrops_kingsleyae
ENSORLG00020013437	tufm	71	79.683	ENSPSIG00000005302	TUFM	100	79.683	Pelodiscus_sinensis
ENSORLG00020013437	tufm	94	91.866	ENSPMGG00000015631	tufm	99	91.885	Periophthalmus_magnuspinnatus
ENSORLG00020013437	tufm	99	73.614	ENSPEMG00000012208	Tufm	99	73.614	Peromyscus_maniculatus_bairdii
ENSORLG00020013437	tufm	99	73.626	ENSPCIG00000025208	TUFM	99	73.626	Phascolarctos_cinereus
ENSORLG00020013437	tufm	100	91.704	ENSPFOG00000007043	tufm	100	91.704	Poecilia_formosa
ENSORLG00020013437	tufm	98	89.450	ENSPLAG00000014372	tufm	97	89.450	Poecilia_latipinna
ENSORLG00020013437	tufm	100	91.928	ENSPMEG00000019508	tufm	100	91.928	Poecilia_mexicana
ENSORLG00020013437	tufm	100	90.179	ENSPMEG00000014520	-	100	90.179	Poecilia_mexicana
ENSORLG00020013437	tufm	100	92.377	ENSPREG00000013913	tufm	100	92.377	Poecilia_reticulata
ENSORLG00020013437	tufm	99	72.727	ENSPPYG00000007226	TUFM	99	72.727	Pongo_abelii
ENSORLG00020013437	tufm	96	71.096	ENSPCAG00000015294	TUFM	94	71.096	Procavia_capensis
ENSORLG00020013437	tufm	99	73.230	ENSPCOG00000012267	TUFM	99	73.230	Propithecus_coquereli
ENSORLG00020013437	tufm	99	95.270	ENSPNYG00000008905	tufm	100	95.270	Pundamilia_nyererei
ENSORLG00020013437	tufm	100	89.462	ENSPNAG00000018881	tufm	100	89.462	Pygocentrus_nattereri
ENSORLG00020013437	tufm	99	74.058	ENSRNOG00000018604	Tufm	99	74.058	Rattus_norvegicus
ENSORLG00020013437	tufm	96	72.706	ENSRBIG00000042008	-	97	72.706	Rhinopithecus_bieti
ENSORLG00020013437	tufm	58	76.357	ENSRBIG00000036713	-	94	76.357	Rhinopithecus_bieti
ENSORLG00020013437	tufm	100	73.673	ENSRROG00000036858	-	99	73.673	Rhinopithecus_roxellana
ENSORLG00020013437	tufm	63	73.835	ENSRROG00000044977	-	79	71.575	Rhinopithecus_roxellana
ENSORLG00020013437	tufm	98	57.955	YOR187W	TUF1	99	57.955	Saccharomyces_cerevisiae
ENSORLG00020013437	tufm	98	72.893	ENSSBOG00000026542	TUFM	98	72.893	Saimiri_boliviensis_boliviensis
ENSORLG00020013437	tufm	98	76.606	ENSSHAG00000012121	TUFM	98	77.882	Sarcophilus_harrisii
ENSORLG00020013437	tufm	100	85.714	ENSSFOG00015013352	tufm	100	85.714	Scleropages_formosus
ENSORLG00020013437	tufm	100	93.049	ENSSMAG00000010053	tufm	100	93.049	Scophthalmus_maximus
ENSORLG00020013437	tufm	100	95.067	ENSSDUG00000016896	tufm	100	95.067	Seriola_dumerili
ENSORLG00020013437	tufm	100	95.291	ENSSLDG00000006494	tufm	100	95.291	Seriola_lalandi_dorsalis
ENSORLG00020013437	tufm	84	75.789	ENSSARG00000011228	TUFM	100	75.789	Sorex_araneus
ENSORLG00020013437	tufm	93	72.249	ENSSPUG00000016312	TUFM	99	70.930	Sphenodon_punctatus
ENSORLG00020013437	tufm	100	92.825	ENSSPAG00000009936	tufm	99	92.825	Stegastes_partitus
ENSORLG00020013437	tufm	99	74.058	ENSSSCG00000007803	TUFM	99	74.058	Sus_scrofa
ENSORLG00020013437	tufm	100	91.480	ENSTRUG00000008300	tufm	100	91.480	Takifugu_rubripes
ENSORLG00020013437	tufm	99	70.705	ENSTBEG00000015029	TUFM	99	71.586	Tupaia_belangeri
ENSORLG00020013437	tufm	62	77.818	ENSTTRG00000001980	-	100	77.818	Tursiops_truncatus
ENSORLG00020013437	tufm	58	77.821	ENSTTRG00000005930	-	57	77.821	Tursiops_truncatus
ENSORLG00020013437	tufm	100	74.336	ENSUAMG00000001471	TUFM	100	74.336	Ursus_americanus
ENSORLG00020013437	tufm	91	79.310	ENSUMAG00000009341	TUFM	99	79.310	Ursus_maritimus
ENSORLG00020013437	tufm	62	77.091	ENSVPAG00000009541	TUFM	100	77.091	Vicugna_pacos
ENSORLG00020013437	tufm	99	74.501	ENSVVUG00000024170	TUFM	98	75.510	Vulpes_vulpes
ENSORLG00020013437	tufm	84	53.439	ENSXETG00000028019	-	78	89.362	Xenopus_tropicalis
ENSORLG00020013437	tufm	98	93.333	ENSXMAG00000011848	tufm	98	94.393	Xiphophorus_maculatus