EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00020013514 (Gene tree)
Gene ID
-
Gene Symbol
atxn1b
Alias
-
Full Name
ataxin 1b
Gene Type
protein_coding
Species
Oryzias_latipes_hni
Status
putative
Strand
Plus strand
Length
11657 bases
Position
chr16:15926212-15937868
Accession
ZDB-GENE-061218-2
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00020012590AXHPF08517.124.1e-4111
ENSORLP00020012600AXHPF08517.124.1e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00020019816-3015-ENSORLP00020012600828 (aa)--
ENSORLT00020019805-3124-ENSORLP00020012590828 (aa)--
Gene Model
Click here to download ENSORLG00020013514's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020013514's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00020013514atxn1b9938.400ENSORLG00020006722atxn1a9937.801
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00020013514atxn1b9938.074ENSG00000124788ATXN19938.168Homo_sapiens
ENSORLG00020013514atxn1b9941.110ENSAPOG00000018662atxn1a9941.480Acanthochromis_polyacanthus
ENSORLG00020013514atxn1b10080.456ENSAPOG00000005003atxn1b10080.576Acanthochromis_polyacanthus
ENSORLG00020013514atxn1b9938.117ENSAMEG00000004299ATXN19938.272Ailuropoda_melanoleuca
ENSORLG00020013514atxn1b8482.759ENSACIG00000016088atxn1a9682.759Amphilophus_citrinellus
ENSORLG00020013514atxn1b10070.290ENSACIG00000014661atxn1b10070.290Amphilophus_citrinellus
ENSORLG00020013514atxn1b9941.297ENSAOCG00000015796atxn1a9941.572Amphiprion_ocellaris
ENSORLG00020013514atxn1b10080.168ENSAOCG00000019715atxn1b10080.288Amphiprion_ocellaris
ENSORLG00020013514atxn1b10080.168ENSAPEG00000022436atxn1b10080.288Amphiprion_percula
ENSORLG00020013514atxn1b9941.250ENSAPEG00000011313atxn1a9941.458Amphiprion_percula
ENSORLG00020013514atxn1b10078.897ENSATEG00000002982atxn1b10078.897Anabas_testudineus
ENSORLG00020013514atxn1b9941.782ENSATEG00000013601atxn1a9941.217Anabas_testudineus
ENSORLG00020013514atxn1b9938.209ENSACAG00000003919ATXN19938.209Anolis_carolinensis
ENSORLG00020013514atxn1b7636.978ENSANAG00000025424-9637.283Aotus_nancymaae
ENSORLG00020013514atxn1b9839.213ENSANAG00000025206-9539.233Aotus_nancymaae
ENSORLG00020013514atxn1b10079.426ENSACLG00000005697atxn1b10079.426Astatotilapia_calliptera
ENSORLG00020013514atxn1b9940.575ENSACLG00000015429atxn1a9940.023Astatotilapia_calliptera
ENSORLG00020013514atxn1b9840.939ENSAMXG00000017432atxn1b9840.984Astyanax_mexicanus
ENSORLG00020013514atxn1b9941.040ENSAMXG00000042368atxn1a9942.529Astyanax_mexicanus
ENSORLG00020013514atxn1b9937.847ENSBTAG00000019675ATXN19939.043Bos_taurus
ENSORLG00020013514atxn1b9838.989ENSCJAG00000006563ATXN19339.233Callithrix_jacchus
ENSORLG00020013514atxn1b9938.994ENSCAFG00000009934ATXN19938.970Canis_familiaris
ENSORLG00020013514atxn1b9838.101ENSCAFG00020012647ATXN19538.789Canis_lupus_dingo
ENSORLG00020013514atxn1b9938.101ENSCHIG00000018697ATXN19938.659Capra_hircus
ENSORLG00020013514atxn1b5151.957ENSTSYG00000000858ATXN19447.091Carlito_syrichta
ENSORLG00020013514atxn1b9938.858ENSCAPG00000013095ATXN19939.394Cavia_aperea
ENSORLG00020013514atxn1b9939.008ENSCPOG00000022869ATXN19939.751Cavia_porcellus
ENSORLG00020013514atxn1b9939.013ENSCCAG00000018590ATXN19939.258Cebus_capucinus
ENSORLG00020013514atxn1b9938.932ENSCATG00000042777ATXN19938.803Cercocebus_atys
ENSORLG00020013514atxn1b9939.435ENSCLAG00000002212ATXN19939.977Chinchilla_lanigera
ENSORLG00020013514atxn1b9938.573ENSCSAG00000007589ATXN19938.889Chlorocebus_sabaeus
ENSORLG00020013514atxn1b9939.013ENSCPBG00000022373ATXN19939.731Chrysemys_picta_bellii
ENSORLG00020013514atxn1b9939.082ENSCANG00000033673ATXN19938.951Colobus_angolensis_palliatus
ENSORLG00020013514atxn1b9938.539ENSCGRG00001022108Atxn19938.989Cricetulus_griseus_chok1gshd
ENSORLG00020013514atxn1b9938.889ENSCGRG00000014084Atxn19939.342Cricetulus_griseus_crigri
ENSORLG00020013514atxn1b9938.702ENSCSEG00000017647atxn1a9939.690Cynoglossus_semilaevis
ENSORLG00020013514atxn1b10073.045ENSCSEG00000004666atxn1b10073.045Cynoglossus_semilaevis
ENSORLG00020013514atxn1b9939.607ENSCVAG00000023240atxn1a9939.175Cyprinodon_variegatus
ENSORLG00020013514atxn1b10076.739ENSCVAG00000010945atxn1b10076.739Cyprinodon_variegatus
ENSORLG00020013514atxn1b9939.886ENSDARG00000061687atxn1a9941.781Danio_rerio
ENSORLG00020013514atxn1b9942.117ENSDARG00000060862atxn1b9941.295Danio_rerio
ENSORLG00020013514atxn1b5846.232ENSDNOG00000048471ATXN19245.825Dasypus_novemcinctus
ENSORLG00020013514atxn1b9937.847ENSDORG00000005940Atxn19937.542Dipodomys_ordii
ENSORLG00020013514atxn1b8242.512ENSETEG00000003815ATXN18743.981Echinops_telfairi
ENSORLG00020013514atxn1b9939.494ENSEASG00005011799ATXN19939.691Equus_asinus_asinus
ENSORLG00020013514atxn1b9939.448ENSECAG00000009251ATXN19939.646Equus_caballus
ENSORLG00020013514atxn1b9939.266ENSEEUG00000007120ATXN19939.130Erinaceus_europaeus
ENSORLG00020013514atxn1b9837.077ENSELUG00000003691atxn1a9637.580Esox_lucius
ENSORLG00020013514atxn1b9262.712ENSELUG00000001311atxn1b7862.712Esox_lucius
ENSORLG00020013514atxn1b9938.235ENSFCAG00000011298ATXN19938.209Felis_catus
ENSORLG00020013514atxn1b9939.977ENSFALG00000013400ATXN19940.226Ficedula_albicollis
ENSORLG00020013514atxn1b8945.022ENSFDAG00000020905ATXN19937.617Fukomys_damarensis
ENSORLG00020013514atxn1b10076.259ENSFHEG00000017226atxn1b10076.139Fundulus_heteroclitus
ENSORLG00020013514atxn1b9939.091ENSFHEG00000019419atxn1a9938.626Fundulus_heteroclitus
ENSORLG00020013514atxn1b9957.775ENSGMOG00000013508atxn1b10057.656Gadus_morhua
ENSORLG00020013514atxn1b9940.682ENSGALG00000012709ATXN19940.976Gallus_gallus
ENSORLG00020013514atxn1b10075.569ENSGAFG00000007295atxn1b10076.168Gambusia_affinis
ENSORLG00020013514atxn1b9938.717ENSGAFG00000010544atxn1a9938.084Gambusia_affinis
ENSORLG00020013514atxn1b9968.940ENSGACG00000008747atxn1b10068.819Gasterosteus_aculeatus
ENSORLG00020013514atxn1b9939.387ENSGACG00000003472atxn1a9938.631Gasterosteus_aculeatus
ENSORLG00020013514atxn1b9938.272ENSGAGG00000006868ATXN19939.213Gopherus_agassizii
ENSORLG00020013514atxn1b9938.300ENSGGOG00000004169ATXN19938.394Gorilla_gorilla
ENSORLG00020013514atxn1b10079.545ENSHBUG00000016081atxn1b10079.545Haplochromis_burtoni
ENSORLG00020013514atxn1b9940.732ENSHBUG00000002508atxn1a9940.068Haplochromis_burtoni
ENSORLG00020013514atxn1b9939.977ENSHGLG00000009360ATXN19940.068Heterocephalus_glaber_female
ENSORLG00020013514atxn1b9939.977ENSHGLG00100003038ATXN19940.068Heterocephalus_glaber_male
ENSORLG00020013514atxn1b9973.406ENSHCOG00000014835atxn1b9973.526Hippocampus_comes
ENSORLG00020013514atxn1b8740.879ENSHCOG00000019032atxn1a9940.879Hippocampus_comes
ENSORLG00020013514atxn1b9942.982ENSIPUG00000002088atxn1b10042.562Ictalurus_punctatus
ENSORLG00020013514atxn1b9940.462ENSIPUG00000001402atxn19940.416Ictalurus_punctatus
ENSORLG00020013514atxn1b9939.096ENSSTOG00000025423ATXN19939.411Ictidomys_tridecemlineatus
ENSORLG00020013514atxn1b9938.870ENSJJAG00000000377Atxn19938.608Jaculus_jaculus
ENSORLG00020013514atxn1b9978.960ENSKMAG00000013507atxn1b9978.839Kryptolebias_marmoratus
ENSORLG00020013514atxn1b9939.294ENSKMAG00000007216atxn1a9939.435Kryptolebias_marmoratus
ENSORLG00020013514atxn1b9940.321ENSLBEG00000024388atxn1a9940.639Labrus_bergylta
ENSORLG00020013514atxn1b10075.714ENSLBEG00000024264atxn1b10075.476Labrus_bergylta
ENSORLG00020013514atxn1b9939.527ENSLACG00000005371ATXN19939.509Latimeria_chalumnae
ENSORLG00020013514atxn1b9944.291ENSLOCG00000002910atxn1a9943.924Lepisosteus_oculatus
ENSORLG00020013514atxn1b9938.608ENSLAFG00000015231ATXN19938.444Loxodonta_africana
ENSORLG00020013514atxn1b9938.760ENSMFAG00000032779ATXN19938.717Macaca_fascicularis
ENSORLG00020013514atxn1b9938.735ENSMMUG00000002940ATXN19938.717Macaca_mulatta
ENSORLG00020013514atxn1b9938.957ENSMNEG00000036667ATXN19938.803Macaca_nemestrina
ENSORLG00020013514atxn1b7541.629ENSMLEG00000040480ATXN18941.185Mandrillus_leucophaeus
ENSORLG00020013514atxn1b9941.430ENSMAMG00000014004atxn1a9941.290Mastacembelus_armatus
ENSORLG00020013514atxn1b10079.067ENSMAMG00000011503atxn1b10079.067Mastacembelus_armatus
ENSORLG00020013514atxn1b9940.575ENSMZEG00005003602atxn1a9940.023Maylandia_zebra
ENSORLG00020013514atxn1b10079.426ENSMZEG00005015064atxn1b10079.426Maylandia_zebra
ENSORLG00020013514atxn1b9939.116ENSMGAG00000003028ATXN19939.185Meleagris_gallopavo
ENSORLG00020013514atxn1b9938.964ENSMAUG00000011491Atxn19938.976Mesocricetus_auratus
ENSORLG00020013514atxn1b9938.782ENSMICG00000011875ATXN19938.757Microcebus_murinus
ENSORLG00020013514atxn1b9939.322ENSMOCG00000001527Atxn19939.374Microtus_ochrogaster
ENSORLG00020013514atxn1b9940.181ENSMMOG00000018593atxn1a9940.428Mola_mola
ENSORLG00020013514atxn1b9375.681ENSMMOG00000002884atxn1b10075.681Mola_mola
ENSORLG00020013514atxn1b9939.164ENSMODG00000010827ATXN19938.546Monodelphis_domestica
ENSORLG00020013514atxn1b9979.805ENSMALG00000012137atxn1b9979.805Monopterus_albus
ENSORLG00020013514atxn1b9941.290ENSMALG00000005209atxn1a9940.474Monopterus_albus
ENSORLG00020013514atxn1b9939.052MGP_CAROLIEiJ_G0018479Atxn19939.140Mus_caroli
ENSORLG00020013514atxn1b9939.096ENSMUSG00000046876Atxn19939.185Mus_musculus
ENSORLG00020013514atxn1b9939.209MGP_PahariEiJ_G0019546Atxn19939.298Mus_pahari
ENSORLG00020013514atxn1b9939.096MGP_SPRETEiJ_G0019357Atxn19939.185Mus_spretus
ENSORLG00020013514atxn1b9938.634ENSMPUG00000005398ATXN19938.721Mustela_putorius_furo
ENSORLG00020013514atxn1b9939.333ENSMLUG00000000896ATXN19939.485Myotis_lucifugus
ENSORLG00020013514atxn1b9938.764ENSNGAG00000020481Atxn19938.926Nannospalax_galili
ENSORLG00020013514atxn1b9940.618ENSNBRG00000013216atxn1a9939.795Neolamprologus_brichardi
ENSORLG00020013514atxn1b10073.188ENSNBRG00000014776atxn1b10072.705Neolamprologus_brichardi
ENSORLG00020013514atxn1b9938.667ENSNLEG00000001064ATXN19938.692Nomascus_leucogenys
ENSORLG00020013514atxn1b9937.569ENSMEUG00000014680ATXN19737.099Notamacropus_eugenii
ENSORLG00020013514atxn1b9938.989ENSODEG00000006297ATXN19939.551Octodon_degus
ENSORLG00020013514atxn1b10079.665ENSONIG00000003094atxn1b10079.665Oreochromis_niloticus
ENSORLG00020013514atxn1b8933.373ENSOANG00000011866ATXN19734.657Ornithorhynchus_anatinus
ENSORLG00020013514atxn1b9939.503ENSOCUG00000015360ATXN19939.819Oryctolagus_cuniculus
ENSORLG00020013514atxn1b9938.680ENSORLG00000013003atxn1a9938.699Oryzias_latipes
ENSORLG00020013514atxn1b10098.552ENSORLG00000008288atxn1b10098.552Oryzias_latipes
ENSORLG00020013514atxn1b10098.191ENSORLG00015019876atxn1b10098.191Oryzias_latipes_hsok
ENSORLG00020013514atxn1b9938.409ENSORLG00015014668atxn1a9937.585Oryzias_latipes_hsok
ENSORLG00020013514atxn1b9937.844ENSOMEG00000012883atxn1a9839.106Oryzias_melastigma
ENSORLG00020013514atxn1b10092.883ENSOMEG00000003259atxn1b10092.883Oryzias_melastigma
ENSORLG00020013514atxn1b9939.082ENSOGAG00000028623ATXN110039.071Otolemur_garnettii
ENSORLG00020013514atxn1b7656.863ENSOARG00000012141ATXN17939.701Ovis_aries
ENSORLG00020013514atxn1b9938.200ENSPPAG00000028993ATXN19938.184Pan_paniscus
ENSORLG00020013514atxn1b9938.744ENSPPRG00000004547ATXN19739.422Panthera_pardus
ENSORLG00020013514atxn1b9938.352ENSPTRG00000039250ATXN19938.419Pan_troglodytes
ENSORLG00020013514atxn1b9938.846ENSPANG00000024249ATXN110038.631Papio_anubis
ENSORLG00020013514atxn1b9944.302ENSPKIG00000018323atxn1b9944.896Paramormyrops_kingsleyae
ENSORLG00020013514atxn1b7336.323ENSPSIG00000007158ATXN19236.905Pelodiscus_sinensis
ENSORLG00020013514atxn1b9273.196ENSPMGG00000013610atxn1b9964.756Periophthalmus_magnuspinnatus
ENSORLG00020013514atxn1b7240.065ENSPMGG00000022926atxn1a7340.065Periophthalmus_magnuspinnatus
ENSORLG00020013514atxn1b9938.393ENSPEMG00000014930Atxn19938.814Peromyscus_maniculatus_bairdii
ENSORLG00020013514atxn1b9939.491ENSPCIG00000019413ATXN19938.803Phascolarctos_cinereus
ENSORLG00020013514atxn1b9938.971ENSPFOG00000014422atxn1a9938.927Poecilia_formosa
ENSORLG00020013514atxn1b10077.006ENSPLAG00000018703atxn1b10077.006Poecilia_latipinna
ENSORLG00020013514atxn1b8671.429ENSPLAG00000018978atxn1a9572.549Poecilia_latipinna
ENSORLG00020013514atxn1b10076.766ENSPMEG00000023723atxn1b10076.766Poecilia_mexicana
ENSORLG00020013514atxn1b9939.429ENSPMEG00000002647atxn1a9938.857Poecilia_mexicana
ENSORLG00020013514atxn1b10077.246ENSPREG00000020308atxn1b10077.246Poecilia_reticulata
ENSORLG00020013514atxn1b9939.027ENSPREG00000008333atxn1a9939.165Poecilia_reticulata
ENSORLG00020013514atxn1b9938.132ENSPPYG00000016254ATXN19938.116Pongo_abelii
ENSORLG00020013514atxn1b6960.377ENSPCAG00000008196ATXN16560.377Procavia_capensis
ENSORLG00020013514atxn1b9939.121ENSPCOG00000013612ATXN19939.096Propithecus_coquereli
ENSORLG00020013514atxn1b8939.389ENSPVAG00000016937ATXN18640.032Pteropus_vampyrus
ENSORLG00020013514atxn1b10073.430ENSPNYG00000017095atxn1b10072.947Pundamilia_nyererei
ENSORLG00020013514atxn1b9940.805ENSPNYG00000011920atxn1a9939.794Pundamilia_nyererei
ENSORLG00020013514atxn1b9941.295ENSPNAG00000001226atxn1b10040.909Pygocentrus_nattereri
ENSORLG00020013514atxn1b9942.027ENSPNAG00000010587atxn1a9941.991Pygocentrus_nattereri
ENSORLG00020013514atxn1b9938.851ENSRNOG00000016998Atxn19938.939Rattus_norvegicus
ENSORLG00020013514atxn1b9938.538ENSRBIG00000028213ATXN19938.411Rhinopithecus_bieti
ENSORLG00020013514atxn1b9938.864ENSRROG00000032751ATXN19938.624Rhinopithecus_roxellana
ENSORLG00020013514atxn1b9938.677ENSSBOG00000017381-9939.145Saimiri_boliviensis_boliviensis
ENSORLG00020013514atxn1b7535.451ENSSBOG00000030307-9135.286Saimiri_boliviensis_boliviensis
ENSORLG00020013514atxn1b9152.143ENSSFOG00015005189atxn19942.459Scleropages_formosus
ENSORLG00020013514atxn1b9943.736ENSSFOG00015000179atxn1b9943.068Scleropages_formosus
ENSORLG00020013514atxn1b9739.356ENSSMAG00000007731atxn1a9439.286Scophthalmus_maximus
ENSORLG00020013514atxn1b10078.136ENSSMAG00000019621atxn1b10078.136Scophthalmus_maximus
ENSORLG00020013514atxn1b9941.778ENSSDUG00000011376atxn1a9941.657Seriola_dumerili
ENSORLG00020013514atxn1b10081.220ENSSDUG00000006990atxn1b10081.459Seriola_dumerili
ENSORLG00020013514atxn1b9941.444ENSSLDG00000013505atxn1a9941.545Seriola_lalandi_dorsalis
ENSORLG00020013514atxn1b10081.340ENSSLDG00000016306atxn1b10081.579Seriola_lalandi_dorsalis
ENSORLG00020013514atxn1b9938.269ENSSPUG00000016650ATXN19938.014Sphenodon_punctatus
ENSORLG00020013514atxn1b10081.295ENSSPAG00000003388atxn1b10081.415Stegastes_partitus
ENSORLG00020013514atxn1b9941.270ENSSPAG00000019849atxn1a9941.256Stegastes_partitus
ENSORLG00020013514atxn1b9937.901ENSSSCG00000001065ATXN19937.542Sus_scrofa
ENSORLG00020013514atxn1b9937.955ENSTGUG00000005986ATXN19938.365Taeniopygia_guttata
ENSORLG00020013514atxn1b9970.723ENSTRUG00000024789atxn1b9970.843Takifugu_rubripes
ENSORLG00020013514atxn1b9940.749ENSTRUG00000014645atxn1a9941.043Takifugu_rubripes
ENSORLG00020013514atxn1b9969.428ENSTNIG00000018398atxn1b9969.306Tetraodon_nigroviridis
ENSORLG00020013514atxn1b9940.830ENSTNIG00000005089atxn1a9939.886Tetraodon_nigroviridis
ENSORLG00020013514atxn1b9838.305ENSTTRG00000014678ATXN19638.523Tursiops_truncatus
ENSORLG00020013514atxn1b9937.668ENSUAMG00000004064ATXN19938.133Ursus_americanus
ENSORLG00020013514atxn1b5243.524ENSUMAG00000017635-9244.374Ursus_maritimus
ENSORLG00020013514atxn1b9938.239ENSVVUG00000003386ATXN19938.883Vulpes_vulpes
ENSORLG00020013514atxn1b9937.757ENSXETG00000014184atxn19937.986Xenopus_tropicalis
ENSORLG00020013514atxn1b9938.728ENSXCOG00000020061atxn1a9938.018Xiphophorus_couchianus
ENSORLG00020013514atxn1b10071.256ENSXCOG00000019714atxn1b10071.860Xiphophorus_couchianus
ENSORLG00020013514atxn1b9938.621ENSXMAG00000003615atxn1a9938.400Xiphophorus_maculatus
ENSORLG00020013514atxn1b10076.527ENSXMAG00000014270atxn1b10077.126Xiphophorus_maculatus

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