EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020013516 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 35320 bases
Position: chr22:9079413-9114732
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020012593	ResIII	PF04851.15	2.2e-18	1	1
ENSORLP00020012593	DEAD	PF00270.29	6.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020019809	-	6825	-	ENSORLP00020012593	1989 (aa)	-	-

Gene Model

Click here to download ENSORLG00020013516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020013516's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020013516	-	73	54.798	ENSG00000187790	FANCM	97	58.873	Homo_sapiens
ENSORLG00020013516	-	73	54.977	ENSAMEG00000002114	FANCM	69	54.745	Ailuropoda_melanoleuca
ENSORLG00020013516	-	99	62.448	ENSATEG00000012412	-	99	62.390	Anabas_testudineus
ENSORLG00020013516	-	100	62.795	ENSACLG00000016008	-	100	63.318	Astatotilapia_calliptera
ENSORLG00020013516	-	86	45.700	ENSAMXG00000020275	-	92	46.902	Astyanax_mexicanus
ENSORLG00020013516	-	73	55.121	ENSBTAG00000002612	FANCM	95	56.511	Bos_taurus
ENSORLG00020013516	-	80	54.176	ENSCAFG00000014062	FANCM	50	54.114	Canis_familiaris
ENSORLG00020013516	-	73	54.556	ENSCHIG00000015176	FANCM	50	54.925	Capra_hircus
ENSORLG00020013516	-	79	55.088	ENSCPOG00000001446	FANCM	50	54.971	Cavia_porcellus
ENSORLG00020013516	-	69	55.193	ENSCCAG00000026593	FANCM	50	54.842	Cebus_capucinus
ENSORLG00020013516	-	73	55.029	ENSCATG00000031379	FANCM	50	54.682	Cercocebus_atys
ENSORLG00020013516	-	73	55.029	ENSCSAG00000015308	FANCM	50	54.682	Chlorocebus_sabaeus
ENSORLG00020013516	-	65	59.005	ENSCPBG00000015089	FANCM	67	53.539	Chrysemys_picta_bellii
ENSORLG00020013516	-	73	54.913	ENSCANG00000029498	FANCM	51	54.335	Colobus_angolensis_palliatus
ENSORLG00020013516	-	79	54.988	ENSCGRG00001023573	Fancm	57	54.524	Cricetulus_griseus_chok1gshd
ENSORLG00020013516	-	99	57.265	ENSCSEG00000002313	-	100	57.482	Cynoglossus_semilaevis
ENSORLG00020013516	-	94	59.518	ENSCVAG00000015579	-	99	59.486	Cyprinodon_variegatus
ENSORLG00020013516	-	72	54.480	ENSDNOG00000007697	FANCM	68	54.133	Dasypus_novemcinctus
ENSORLG00020013516	-	79	54.513	ENSDORG00000010095	Fancm	77	54.396	Dipodomys_ordii
ENSORLG00020013516	-	56	56.098	ENSETEG00000003360	FANCM	51	56.098	Echinops_telfairi
ENSORLG00020013516	-	63	54.913	ENSEASG00005007781	FANCM	96	59.433	Equus_asinus_asinus
ENSORLG00020013516	-	67	55.145	ENSECAG00000018694	FANCM	54	55.838	Equus_caballus
ENSORLG00020013516	-	57	52.727	ENSEEUG00000005607	-	60	52.143	Erinaceus_europaeus
ENSORLG00020013516	-	88	50.364	ENSELUG00000015761	-	95	50.100	Esox_lucius
ENSORLG00020013516	-	72	54.545	ENSFALG00000001703	FANCM	77	54.132	Ficedula_albicollis
ENSORLG00020013516	-	80	54.027	ENSFDAG00000009043	FANCM	79	53.803	Fukomys_damarensis
ENSORLG00020013516	-	94	66.978	ENSGMOG00000002019	-	97	66.978	Gadus_morhua
ENSORLG00020013516	-	67	57.596	ENSGALG00000031182	FANCM	68	54.479	Gallus_gallus
ENSORLG00020013516	-	99	54.950	ENSGACG00000009448	-	99	54.571	Gasterosteus_aculeatus
ENSORLG00020013516	-	73	54.861	ENSGGOG00000008546	FANCM	50	54.514	Gorilla_gorilla
ENSORLG00020013516	-	100	61.621	ENSHBUG00000007085	-	100	62.185	Haplochromis_burtoni
ENSORLG00020013516	-	73	54.335	ENSHGLG00000013787	FANCM	68	54.273	Heterocephalus_glaber_female
ENSORLG00020013516	-	73	54.335	ENSHGLG00100006377	FANCM	68	54.273	Heterocephalus_glaber_male
ENSORLG00020013516	-	94	57.910	ENSIPUG00000014629	fancm	89	64.420	Ictalurus_punctatus
ENSORLG00020013516	-	91	63.674	ENSLBEG00000004982	-	95	62.757	Labrus_bergylta
ENSORLG00020013516	-	73	56.134	ENSLACG00000007739	FANCM	50	55.607	Latimeria_chalumnae
ENSORLG00020013516	-	99	51.458	ENSLOCG00000011318	FANCM	95	50.748	Lepisosteus_oculatus
ENSORLG00020013516	-	78	54.513	ENSLAFG00000001136	FANCM	51	54.398	Loxodonta_africana
ENSORLG00020013516	-	73	54.913	ENSMFAG00000000383	FANCM	50	52.717	Macaca_fascicularis
ENSORLG00020013516	-	78	54.913	ENSMMUG00000016513	FANCM	50	52.717	Macaca_mulatta
ENSORLG00020013516	-	100	61.098	ENSMAMG00000007087	-	99	61.051	Mastacembelus_armatus
ENSORLG00020013516	-	100	62.795	ENSMZEG00005004644	-	100	63.322	Maylandia_zebra
ENSORLG00020013516	-	79	52.204	ENSMAUG00000015450	Fancm	77	51.916	Mesocricetus_auratus
ENSORLG00020013516	-	73	54.902	ENSMICG00000005811	FANCM	50	55.029	Microcebus_murinus
ENSORLG00020013516	-	54	55.156	ENSMOCG00000008775	Fancm	50	55.093	Microtus_ochrogaster
ENSORLG00020013516	-	95	56.952	ENSMMOG00000010215	-	99	57.209	Mola_mola
ENSORLG00020013516	-	72	52.914	ENSMODG00000007334	FANCM	50	52.914	Monodelphis_domestica
ENSORLG00020013516	-	73	53.953	ENSMUSG00000055884	Fancm	95	57.709	Mus_musculus
ENSORLG00020013516	-	80	54.872	ENSMPUG00000004849	FANCM	77	54.408	Mustela_putorius_furo
ENSORLG00020013516	-	79	53.125	ENSMLUG00000006671	FANCM	72	52.778	Myotis_lucifugus
ENSORLG00020013516	-	78	53.480	ENSNGAG00000017199	Fancm	78	53.480	Nannospalax_galili
ENSORLG00020013516	-	75	53.821	ENSNLEG00000004432	FANCM	51	54.630	Nomascus_leucogenys
ENSORLG00020013516	-	91	77.370	ENSONIG00000003531	-	90	77.370	Oreochromis_niloticus
ENSORLG00020013516	-	69	58.451	ENSOANG00000013997	FANCM	65	58.451	Ornithorhynchus_anatinus
ENSORLG00020013516	-	80	54.254	ENSOCUG00000007539	FANCM	52	53.923	Oryctolagus_cuniculus
ENSORLG00020013516	-	100	97.594	ENSORLG00000014503	-	100	97.594	Oryzias_latipes
ENSORLG00020013516	-	100	97.288	ENSORLG00015012100	-	100	97.288	Oryzias_latipes_hsok
ENSORLG00020013516	-	100	81.200	ENSOMEG00000010717	-	99	81.150	Oryzias_melastigma
ENSORLG00020013516	-	73	56.047	ENSOGAG00000003015	FANCM	50	55.556	Otolemur_garnettii
ENSORLG00020013516	-	73	54.787	ENSOARG00000009429	FANCM	69	55.156	Ovis_aries
ENSORLG00020013516	-	73	55.145	ENSPPAG00000028944	FANCM	51	54.798	Pan_paniscus
ENSORLG00020013516	-	73	54.798	ENSPTRG00000006307	FANCM	51	54.451	Pan_troglodytes
ENSORLG00020013516	-	73	54.913	ENSPANG00000023200	FANCM	50	54.566	Papio_anubis
ENSORLG00020013516	-	79	53.172	ENSPEMG00000005619	Fancm	50	53.057	Peromyscus_maniculatus_bairdii
ENSORLG00020013516	-	85	80.694	ENSPFOG00000002008	-	86	80.694	Poecilia_formosa
ENSORLG00020013516	-	99	61.176	ENSPLAG00000014164	-	99	61.176	Poecilia_latipinna
ENSORLG00020013516	-	99	60.985	ENSPMEG00000010746	-	99	61.084	Poecilia_mexicana
ENSORLG00020013516	-	99	61.413	ENSPREG00000019849	-	99	61.166	Poecilia_reticulata
ENSORLG00020013516	-	92	55.029	ENSPPYG00000005781	FANCM	54	54.682	Pongo_abelii
ENSORLG00020013516	-	68	53.361	ENSPVAG00000015802	FANCM	64	54.035	Pteropus_vampyrus
ENSORLG00020013516	-	99	43.845	ENSPNAG00000013558	-	66	54.444	Pygocentrus_nattereri
ENSORLG00020013516	-	81	50.707	ENSRNOG00000056721	Fancm	82	50.381	Rattus_norvegicus
ENSORLG00020013516	-	73	54.325	ENSRBIG00000011451	FANCM	50	54.325	Rhinopithecus_bieti
ENSORLG00020013516	-	73	54.798	ENSRROG00000028917	FANCM	50	54.566	Rhinopithecus_roxellana
ENSORLG00020013516	-	73	54.809	ENSSBOG00000030882	FANCM	51	54.461	Saimiri_boliviensis_boliviensis
ENSORLG00020013516	-	60	57.931	ENSSHAG00000000507	FANCM	57	52.824	Sarcophilus_harrisii
ENSORLG00020013516	-	99	60.019	ENSSMAG00000019903	-	100	74.402	Scophthalmus_maximus
ENSORLG00020013516	-	70	60.232	ENSSDUG00000016682	-	91	90.223	Seriola_dumerili
ENSORLG00020013516	-	99	62.569	ENSSLDG00000003408	-	99	62.627	Seriola_lalandi_dorsalis
ENSORLG00020013516	-	60	57.774	ENSSARG00000002618	FANCM	51	58.232	Sorex_araneus
ENSORLG00020013516	-	94	54.745	ENSSSCG00000005000	FANCM	51	54.514	Sus_scrofa
ENSORLG00020013516	-	99	56.603	ENSTNIG00000017277	-	100	56.459	Tetraodon_nigroviridis
ENSORLG00020013516	-	73	53.372	ENSTTRG00000006669	FANCM	69	52.907	Tursiops_truncatus
ENSORLG00020013516	-	80	53.944	ENSVVUG00000000357	FANCM	50	53.882	Vulpes_vulpes
ENSORLG00020013516	-	99	61.588	ENSXMAG00000007702	-	99	62.149	Xiphophorus_maculatus