EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020013619 (Gene tree)
Gene ID: -
Gene Symbol: rbm12b
Alias: -
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 1947 bases
Position: chr16:15886430-15888376
Accession: ZDB-GENE-030131-6428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020029599	RRM_1	PF00076.22	2.2e-36	1	3
ENSORLP00020029599	RRM_1	PF00076.22	2.2e-36	2	3
ENSORLP00020029599	RRM_1	PF00076.22	2.2e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020019942	-	1947	-	ENSORLP00020029599	648 (aa)	-	-

Gene Model

Click here to download ENSORLG00020013619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020013619's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020013619	rbm12b	83	48.052	ENSG00000183808	RBM12B	98	75.000	Homo_sapiens
ENSORLG00020013619	rbm12b	97	63.380	ENSAPOG00000013963	rbm12b	100	63.380	Acanthochromis_polyacanthus
ENSORLG00020013619	rbm12b	83	46.753	ENSAMEG00000007134	RBM12B	66	46.753	Ailuropoda_melanoleuca
ENSORLG00020013619	rbm12b	82	61.620	ENSACIG00000014943	rbm12b	98	61.620	Amphilophus_citrinellus
ENSORLG00020013619	rbm12b	97	64.006	ENSAOCG00000024270	rbm12b	100	64.006	Amphiprion_ocellaris
ENSORLG00020013619	rbm12b	96	40.845	ENSAPEG00000022079	rbm12b	99	58.224	Amphiprion_percula
ENSORLG00020013619	rbm12b	73	53.086	ENSATEG00000001886	zgc:153215	81	47.706	Anabas_testudineus
ENSORLG00020013619	rbm12b	100	61.608	ENSATEG00000004578	rbm12b	100	61.608	Anabas_testudineus
ENSORLG00020013619	rbm12b	98	71.591	ENSAPLG00000002020	RBM12B	100	36.262	Anas_platyrhynchos
ENSORLG00020013619	rbm12b	83	46.753	ENSACAG00000003463	RBM12B	56	46.753	Anolis_carolinensis
ENSORLG00020013619	rbm12b	83	48.052	ENSANAG00000034015	RBM12B	67	48.052	Aotus_nancymaae
ENSORLG00020013619	rbm12b	97	54.293	ENSACLG00000005578	rbm12b	100	54.293	Astatotilapia_calliptera
ENSORLG00020013619	rbm12b	98	63.043	ENSACLG00000005575	rbm12b	98	63.043	Astatotilapia_calliptera
ENSORLG00020013619	rbm12b	72	51.429	ENSAMXG00000020853	zgc:153215	73	51.429	Astyanax_mexicanus
ENSORLG00020013619	rbm12b	97	44.172	ENSAMXG00000041973	rbm12b	100	44.870	Astyanax_mexicanus
ENSORLG00020013619	rbm12b	84	49.351	ENSBTAG00000013408	RBM12B	65	49.351	Bos_taurus
ENSORLG00020013619	rbm12b	83	46.753	ENSCAFG00000009109	RBM12B	56	46.753	Canis_familiaris
ENSORLG00020013619	rbm12b	83	46.753	ENSCAFG00020012203	RBM12B	64	46.753	Canis_lupus_dingo
ENSORLG00020013619	rbm12b	72	38.289	ENSCHIG00000006790	RBM12B	67	38.289	Capra_hircus
ENSORLG00020013619	rbm12b	83	48.052	ENSTSYG00000012515	RBM12B	57	48.052	Carlito_syrichta
ENSORLG00020013619	rbm12b	85	50.649	ENSCAPG00000003543	RBM12B	61	50.649	Cavia_aperea
ENSORLG00020013619	rbm12b	85	50.649	ENSCPOG00000007815	RBM12B	61	50.649	Cavia_porcellus
ENSORLG00020013619	rbm12b	83	48.052	ENSCATG00000030769	RBM12B	65	48.052	Cercocebus_atys
ENSORLG00020013619	rbm12b	85	50.649	ENSCLAG00000017617	RBM12B	60	50.649	Chinchilla_lanigera
ENSORLG00020013619	rbm12b	83	48.052	ENSCSAG00000018559	RBM12B	56	48.052	Chlorocebus_sabaeus
ENSORLG00020013619	rbm12b	81	42.857	ENSCHOG00000008934	RBM12B	58	42.857	Choloepus_hoffmanni
ENSORLG00020013619	rbm12b	97	35.879	ENSCPBG00000003061	RBM12B	100	35.879	Chrysemys_picta_bellii
ENSORLG00020013619	rbm12b	85	48.052	ENSCANG00000030379	RBM12B	67	48.052	Colobus_angolensis_palliatus
ENSORLG00020013619	rbm12b	83	51.948	ENSCGRG00001008710	-	65	51.948	Cricetulus_griseus_chok1gshd
ENSORLG00020013619	rbm12b	98	56.090	ENSCSEG00000004610	rbm12b	98	56.090	Cynoglossus_semilaevis
ENSORLG00020013619	rbm12b	52	31.445	ENSCSEG00000001575	-	98	31.445	Cynoglossus_semilaevis
ENSORLG00020013619	rbm12b	97	59.126	ENSCVAG00000011047	rbm12b	100	59.126	Cyprinodon_variegatus
ENSORLG00020013619	rbm12b	95	40.099	ENSCVAG00000009259	-	99	40.099	Cyprinodon_variegatus
ENSORLG00020013619	rbm12b	63	56.627	ENSDARG00000055889	zgc:153215	78	56.627	Danio_rerio
ENSORLG00020013619	rbm12b	97	41.880	ENSDARG00000079717	rbm12b	100	42.351	Danio_rerio
ENSORLG00020013619	rbm12b	83	49.351	ENSDNOG00000041608	RBM12B	56	49.351	Dasypus_novemcinctus
ENSORLG00020013619	rbm12b	97	38.229	ENSDORG00000024034	-	69	38.229	Dipodomys_ordii
ENSORLG00020013619	rbm12b	75	37.812	ENSETEG00000013005	-	69	37.812	Echinops_telfairi
ENSORLG00020013619	rbm12b	72	32.627	ENSEBUG00000004292	-	82	32.627	Eptatretus_burgeri
ENSORLG00020013619	rbm12b	83	49.351	ENSEASG00005016297	RBM12B	64	49.351	Equus_asinus_asinus
ENSORLG00020013619	rbm12b	83	49.351	ENSECAG00000017870	RBM12B	57	49.351	Equus_caballus
ENSORLG00020013619	rbm12b	83	46.753	ENSFCAG00000029274	RBM12B	65	46.753	Felis_catus
ENSORLG00020013619	rbm12b	97	36.490	ENSFALG00000014893	RBM12B	100	37.187	Ficedula_albicollis
ENSORLG00020013619	rbm12b	85	50.649	ENSFDAG00000005576	RBM12B	59	50.649	Fukomys_damarensis
ENSORLG00020013619	rbm12b	97	61.646	ENSFHEG00000016425	rbm12b	100	61.646	Fundulus_heteroclitus
ENSORLG00020013619	rbm12b	97	53.052	ENSGMOG00000013467	rbm12b	100	53.052	Gadus_morhua
ENSORLG00020013619	rbm12b	97	73.810	ENSGALG00000035129	RBM12B	100	37.068	Gallus_gallus
ENSORLG00020013619	rbm12b	70	30.588	ENSGAFG00000007845	zgc:153215	98	30.588	Gambusia_affinis
ENSORLG00020013619	rbm12b	97	64.441	ENSGAFG00000007224	rbm12b	100	64.441	Gambusia_affinis
ENSORLG00020013619	rbm12b	97	57.919	ENSGACG00000008682	rbm12b	99	57.919	Gasterosteus_aculeatus
ENSORLG00020013619	rbm12b	97	36.040	ENSGAGG00000009774	RBM12B	100	36.040	Gopherus_agassizii
ENSORLG00020013619	rbm12b	83	46.753	ENSGGOG00000011909	RBM12B	64	46.753	Gorilla_gorilla
ENSORLG00020013619	rbm12b	72	48.810	ENSHBUG00000016150	zgc:153215	78	48.810	Haplochromis_burtoni
ENSORLG00020013619	rbm12b	97	60.916	ENSHBUG00000016227	rbm12b	100	60.916	Haplochromis_burtoni
ENSORLG00020013619	rbm12b	85	50.649	ENSHGLG00000009063	RBM12B	60	50.649	Heterocephalus_glaber_female
ENSORLG00020013619	rbm12b	85	50.649	ENSHGLG00100021324	RBM12B	60	50.649	Heterocephalus_glaber_male
ENSORLG00020013619	rbm12b	97	50.390	ENSHCOG00000014952	rbm12b	100	50.390	Hippocampus_comes
ENSORLG00020013619	rbm12b	99	42.415	ENSIPUG00000001167	RBM12B	99	42.415	Ictalurus_punctatus
ENSORLG00020013619	rbm12b	70	49.020	ENSIPUG00000019731	zgc:153215	87	49.020	Ictalurus_punctatus
ENSORLG00020013619	rbm12b	83	50.649	ENSSTOG00000027445	RBM12B	67	50.649	Ictidomys_tridecemlineatus
ENSORLG00020013619	rbm12b	83	49.351	ENSJJAG00000004165	-	64	49.351	Jaculus_jaculus
ENSORLG00020013619	rbm12b	97	58.085	ENSKMAG00000013715	rbm12b	99	58.085	Kryptolebias_marmoratus
ENSORLG00020013619	rbm12b	98	58.100	ENSKMAG00000013704	rbm12b	97	58.100	Kryptolebias_marmoratus
ENSORLG00020013619	rbm12b	71	30.898	ENSKMAG00000004958	zgc:153215	99	30.898	Kryptolebias_marmoratus
ENSORLG00020013619	rbm12b	72	30.980	ENSLBEG00000002597	zgc:153215	99	31.189	Labrus_bergylta
ENSORLG00020013619	rbm12b	98	79.762	ENSLACG00000007177	RBM12B	100	38.691	Latimeria_chalumnae
ENSORLG00020013619	rbm12b	98	48.301	ENSLOCG00000018344	rbm12b	100	48.301	Lepisosteus_oculatus
ENSORLG00020013619	rbm12b	83	47.500	ENSLAFG00000029949	RBM12B	66	48.052	Loxodonta_africana
ENSORLG00020013619	rbm12b	83	48.052	ENSMFAG00000045430	RBM12B	65	48.052	Macaca_fascicularis
ENSORLG00020013619	rbm12b	83	48.052	ENSMMUG00000005558	RBM12B	64	48.052	Macaca_mulatta
ENSORLG00020013619	rbm12b	83	48.052	ENSMNEG00000041292	RBM12B	65	48.052	Macaca_nemestrina
ENSORLG00020013619	rbm12b	83	48.052	ENSMLEG00000037288	RBM12B	63	48.052	Mandrillus_leucophaeus
ENSORLG00020013619	rbm12b	97	62.069	ENSMAMG00000011998	rbm12b	100	62.246	Mastacembelus_armatus
ENSORLG00020013619	rbm12b	72	53.571	ENSMAMG00000012038	zgc:153215	79	53.571	Mastacembelus_armatus
ENSORLG00020013619	rbm12b	99	60.031	ENSMZEG00005014845	rbm12b	99	60.692	Maylandia_zebra
ENSORLG00020013619	rbm12b	71	48.810	ENSMZEG00005005435	zgc:153215	77	48.810	Maylandia_zebra
ENSORLG00020013619	rbm12b	97	62.911	ENSMZEG00005015005	rbm12b	100	62.911	Maylandia_zebra
ENSORLG00020013619	rbm12b	71	73.810	ENSMGAG00000011985	RBM12B	80	73.810	Meleagris_gallopavo
ENSORLG00020013619	rbm12b	83	51.948	ENSMAUG00000021752	-	67	51.948	Mesocricetus_auratus
ENSORLG00020013619	rbm12b	83	49.351	ENSMICG00000036969	RBM12B	66	49.351	Microcebus_murinus
ENSORLG00020013619	rbm12b	83	50.649	ENSMOCG00000005603	-	67	50.649	Microtus_ochrogaster
ENSORLG00020013619	rbm12b	63	36.458	ENSMMOG00000003372	zgc:153215	99	36.458	Mola_mola
ENSORLG00020013619	rbm12b	98	59.621	ENSMMOG00000002404	rbm12b	95	59.621	Mola_mola
ENSORLG00020013619	rbm12b	93	41.373	ENSMODG00000007436	RBM12B	83	41.765	Monodelphis_domestica
ENSORLG00020013619	rbm12b	72	32.193	ENSMALG00000001222	zgc:153215	98	32.193	Monopterus_albus
ENSORLG00020013619	rbm12b	97	59.720	ENSMALG00000012059	rbm12b	100	59.720	Monopterus_albus
ENSORLG00020013619	rbm12b	83	49.333	ENSMUSG00000052137	Rbm12b2	67	49.333	Mus_musculus
ENSORLG00020013619	rbm12b	84	50.667	ENSMUSG00000046667	Rbm12b1	68	50.667	Mus_musculus
ENSORLG00020013619	rbm12b	84	49.333	MGP_SPRETEiJ_G0026765	-	62	49.333	Mus_spretus
ENSORLG00020013619	rbm12b	84	49.333	MGP_SPRETEiJ_G0026766	-	68	49.333	Mus_spretus
ENSORLG00020013619	rbm12b	83	49.351	ENSMPUG00000018637	RBM12B	56	49.351	Mustela_putorius_furo
ENSORLG00020013619	rbm12b	83	48.052	ENSMLUG00000002359	RBM12B	59	48.052	Myotis_lucifugus
ENSORLG00020013619	rbm12b	83	46.753	ENSNGAG00000002801	-	61	46.753	Nannospalax_galili
ENSORLG00020013619	rbm12b	97	64.006	ENSNBRG00000015057	rbm12b	100	64.006	Neolamprologus_brichardi
ENSORLG00020013619	rbm12b	72	47.619	ENSNBRG00000013644	zgc:153215	78	47.619	Neolamprologus_brichardi
ENSORLG00020013619	rbm12b	83	48.052	ENSNLEG00000032050	RBM12B	63	48.052	Nomascus_leucogenys
ENSORLG00020013619	rbm12b	85	50.649	ENSODEG00000019204	RBM12B	60	50.649	Octodon_degus
ENSORLG00020013619	rbm12b	97	64.789	ENSONIG00000020612	rbm12b	100	64.789	Oreochromis_niloticus
ENSORLG00020013619	rbm12b	98	37.143	ENSOANG00000015735	-	98	37.429	Ornithorhynchus_anatinus
ENSORLG00020013619	rbm12b	83	49.351	ENSOCUG00000010353	RBM12B	64	49.351	Oryctolagus_cuniculus
ENSORLG00020013619	rbm12b	100	99.537	ENSORLG00000008228	rbm12b	100	99.537	Oryzias_latipes
ENSORLG00020013619	rbm12b	100	99.846	ENSORLG00015019999	rbm12b	100	99.846	Oryzias_latipes_hsok
ENSORLG00020013619	rbm12b	71	30.670	ENSOMEG00000004220	zgc:153215	96	31.410	Oryzias_melastigma
ENSORLG00020013619	rbm12b	100	87.939	ENSOMEG00000022523	rbm12b	100	87.939	Oryzias_melastigma
ENSORLG00020013619	rbm12b	83	49.351	ENSOGAG00000002979	RBM12B	57	49.351	Otolemur_garnettii
ENSORLG00020013619	rbm12b	83	46.753	ENSPTIG00000020071	RBM12B	65	46.753	Panthera_tigris_altaica
ENSORLG00020013619	rbm12b	83	48.052	ENSPTRG00000020420	RBM12B	64	48.052	Pan_troglodytes
ENSORLG00020013619	rbm12b	83	48.052	ENSPANG00000035535	RBM12B	63	48.052	Papio_anubis
ENSORLG00020013619	rbm12b	98	45.359	ENSPKIG00000018719	rbm12b	99	45.359	Paramormyrops_kingsleyae
ENSORLG00020013619	rbm12b	71	31.809	ENSPKIG00000014851	zgc:153215	99	31.809	Paramormyrops_kingsleyae
ENSORLG00020013619	rbm12b	98	37.006	ENSPSIG00000001348	RBM12B	100	37.006	Pelodiscus_sinensis
ENSORLG00020013619	rbm12b	66	49.840	ENSPMGG00000012348	-	97	49.840	Periophthalmus_magnuspinnatus
ENSORLG00020013619	rbm12b	83	51.948	ENSPEMG00000008279	-	67	51.948	Peromyscus_maniculatus_bairdii
ENSORLG00020013619	rbm12b	97	36.460	ENSPCIG00000008556	RBM12B	100	36.460	Phascolarctos_cinereus
ENSORLG00020013619	rbm12b	71	40.909	ENSPFOG00000017451	zgc:153215	73	40.909	Poecilia_formosa
ENSORLG00020013619	rbm12b	98	63.297	ENSPFOG00000020937	rbm12b	97	63.297	Poecilia_formosa
ENSORLG00020013619	rbm12b	97	64.319	ENSPLAG00000018782	rbm12b	100	64.319	Poecilia_latipinna
ENSORLG00020013619	rbm12b	71	31.237	ENSPLAG00000000232	zgc:153215	99	31.237	Poecilia_latipinna
ENSORLG00020013619	rbm12b	97	63.850	ENSPMEG00000011418	rbm12b	100	63.850	Poecilia_mexicana
ENSORLG00020013619	rbm12b	71	30.335	ENSPMEG00000016662	zgc:153215	99	30.335	Poecilia_mexicana
ENSORLG00020013619	rbm12b	97	64.286	ENSPREG00000020770	rbm12b	100	64.286	Poecilia_reticulata
ENSORLG00020013619	rbm12b	71	30.769	ENSPREG00000018608	zgc:153215	99	30.769	Poecilia_reticulata
ENSORLG00020013619	rbm12b	83	48.052	ENSPPYG00000018745	RBM12B	56	48.052	Pongo_abelii
ENSORLG00020013619	rbm12b	83	48.052	ENSPCOG00000023546	RBM12B	64	48.052	Propithecus_coquereli
ENSORLG00020013619	rbm12b	83	49.351	ENSPVAG00000011803	RBM12B	60	49.351	Pteropus_vampyrus
ENSORLG00020013619	rbm12b	97	62.911	ENSPNYG00000016696	rbm12b	100	62.911	Pundamilia_nyererei
ENSORLG00020013619	rbm12b	64	55.952	ENSPNAG00000025628	zgc:153215	75	55.952	Pygocentrus_nattereri
ENSORLG00020013619	rbm12b	97	43.407	ENSPNAG00000008126	rbm12b	99	43.687	Pygocentrus_nattereri
ENSORLG00020013619	rbm12b	83	49.333	ENSRNOG00000016330	Rbm12b	66	49.333	Rattus_norvegicus
ENSORLG00020013619	rbm12b	71	38.000	ENSRNOG00000055292	LOC679087	65	38.000	Rattus_norvegicus
ENSORLG00020013619	rbm12b	83	48.052	ENSRBIG00000035046	RBM12B	64	48.052	Rhinopithecus_bieti
ENSORLG00020013619	rbm12b	83	48.052	ENSRROG00000023660	RBM12B	67	48.052	Rhinopithecus_roxellana
ENSORLG00020013619	rbm12b	83	48.052	ENSSBOG00000027592	RBM12B	63	48.052	Saimiri_boliviensis_boliviensis
ENSORLG00020013619	rbm12b	93	40.945	ENSSHAG00000015335	RBM12B	85	40.945	Sarcophilus_harrisii
ENSORLG00020013619	rbm12b	98	44.444	ENSSFOG00015001584	rbm12b	100	44.444	Scleropages_formosus
ENSORLG00020013619	rbm12b	71	33.532	ENSSFOG00015009427	zgc:153215	99	33.532	Scleropages_formosus
ENSORLG00020013619	rbm12b	72	30.392	ENSSMAG00000019013	zgc:153215	97	30.392	Scophthalmus_maximus
ENSORLG00020013619	rbm12b	97	60.563	ENSSMAG00000019708	rbm12b	100	60.563	Scophthalmus_maximus
ENSORLG00020013619	rbm12b	97	62.709	ENSSDUG00000006856	rbm12b	100	62.709	Seriola_dumerili
ENSORLG00020013619	rbm12b	97	62.861	ENSSLDG00000016156	rbm12b	100	62.861	Seriola_lalandi_dorsalis
ENSORLG00020013619	rbm12b	71	54.321	ENSSLDG00000013581	zgc:153215	76	53.571	Seriola_lalandi_dorsalis
ENSORLG00020013619	rbm12b	83	36.806	ENSSARG00000011845	-	78	36.806	Sorex_araneus
ENSORLG00020013619	rbm12b	71	37.115	ENSSPUG00000016954	RBM12B	90	37.452	Sphenodon_punctatus
ENSORLG00020013619	rbm12b	97	64.945	ENSSPAG00000006774	rbm12b	100	64.945	Stegastes_partitus
ENSORLG00020013619	rbm12b	71	31.887	ENSSPAG00000023584	zgc:153215	98	31.887	Stegastes_partitus
ENSORLG00020013619	rbm12b	83	48.000	ENSSSCG00000006110	RBM12B	57	48.000	Sus_scrofa
ENSORLG00020013619	rbm12b	71	39.243	ENSTGUG00000011860	RBM12B	95	39.243	Taeniopygia_guttata
ENSORLG00020013619	rbm12b	97	54.602	ENSTRUG00000013738	rbm12b	100	54.602	Takifugu_rubripes
ENSORLG00020013619	rbm12b	53	30.435	ENSTNIG00000018374	-	98	30.127	Tetraodon_nigroviridis
ENSORLG00020013619	rbm12b	81	35.739	ENSTBEG00000000449	RBM12B	69	35.739	Tupaia_belangeri
ENSORLG00020013619	rbm12b	83	48.052	ENSUAMG00000023639	RBM12B	63	48.052	Ursus_americanus
ENSORLG00020013619	rbm12b	83	48.052	ENSUMAG00000016008	RBM12B	61	48.052	Ursus_maritimus
ENSORLG00020013619	rbm12b	83	46.753	ENSVVUG00000002694	RBM12B	64	46.753	Vulpes_vulpes
ENSORLG00020013619	rbm12b	97	36.667	ENSXETG00000014694	rbm12b	99	40.302	Xenopus_tropicalis
ENSORLG00020013619	rbm12b	75	33.676	ENSXETG00000014696	rbm12b	99	30.325	Xenopus_tropicalis
ENSORLG00020013619	rbm12b	69	60.526	ENSXCOG00000019735	-	99	60.526	Xiphophorus_couchianus
ENSORLG00020013619	rbm12b	71	30.019	ENSXCOG00000019654	zgc:153215	98	30.019	Xiphophorus_couchianus
ENSORLG00020013619	rbm12b	97	64.688	ENSXMAG00000014213	rbm12b	100	64.688	Xiphophorus_maculatus