EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020013660 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 5013 bases
Position: chr24:20718009-20723021
Accession: ZDB-GENE-040718-407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020012722	RNase_H	PF00075.24	4.1e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020019976	-	1918	-	ENSORLP00020012722	298 (aa)	-	-

Gene Model

Click here to download ENSORLG00020013660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020013660's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020013660	rnaseh1	87	55.762	ENSG00000171865	RNASEH1	89	55.762	Homo_sapiens
ENSORLG00020013660	rnaseh1	99	73.913	ENSAPOG00000000412	rnaseh1	99	73.913	Acanthochromis_polyacanthus
ENSORLG00020013660	rnaseh1	87	55.094	ENSAMEG00000018433	RNASEH1	89	55.472	Ailuropoda_melanoleuca
ENSORLG00020013660	rnaseh1	99	74.497	ENSACIG00000014666	rnaseh1	99	75.503	Amphilophus_citrinellus
ENSORLG00020013660	rnaseh1	98	76.431	ENSAOCG00000015210	rnaseh1	98	76.431	Amphiprion_ocellaris
ENSORLG00020013660	rnaseh1	98	76.431	ENSAPEG00000014104	rnaseh1	98	76.431	Amphiprion_percula
ENSORLG00020013660	rnaseh1	99	74.342	ENSATEG00000000598	rnaseh1	99	76.596	Anabas_testudineus
ENSORLG00020013660	rnaseh1	84	54.651	ENSAPLG00000001961	RNASEH1	100	54.651	Anas_platyrhynchos
ENSORLG00020013660	rnaseh1	97	46.605	ENSACAG00000016857	rnaseh1	99	45.988	Anolis_carolinensis
ENSORLG00020013660	rnaseh1	95	52.218	ENSANAG00000024055	RNASEH1	98	52.218	Aotus_nancymaae
ENSORLG00020013660	rnaseh1	99	72.638	ENSACLG00000006741	rnaseh1	99	73.616	Astatotilapia_calliptera
ENSORLG00020013660	rnaseh1	96	53.819	ENSAMXG00000042940	rnaseh1	97	57.401	Astyanax_mexicanus
ENSORLG00020013660	rnaseh1	88	57.519	ENSBTAG00000016235	RNASEH1	91	57.519	Bos_taurus
ENSORLG00020013660	rnaseh1	91	35.793	WBGene00004382	rnh-1.0	100	35.401	Caenorhabditis_elegans
ENSORLG00020013660	rnaseh1	95	51.014	ENSCJAG00000035450	RNASEH1	98	51.014	Callithrix_jacchus
ENSORLG00020013660	rnaseh1	95	53.448	ENSCAFG00000003259	RNASEH1	98	53.448	Canis_familiaris
ENSORLG00020013660	rnaseh1	50	66.443	ENSCAFG00020004994	RNASEH1	96	66.443	Canis_lupus_dingo
ENSORLG00020013660	rnaseh1	81	45.565	ENSCHIG00000022230	-	99	44.856	Capra_hircus
ENSORLG00020013660	rnaseh1	96	54.795	ENSCHIG00000022264	-	99	54.422	Capra_hircus
ENSORLG00020013660	rnaseh1	88	55.725	ENSTSYG00000012926	RNASEH1	89	55.725	Carlito_syrichta
ENSORLG00020013660	rnaseh1	82	58.065	ENSCAPG00000004813	RNASEH1	99	58.065	Cavia_aperea
ENSORLG00020013660	rnaseh1	90	57.407	ENSCPOG00000022278	Rnaseh1	89	57.407	Cavia_porcellus
ENSORLG00020013660	rnaseh1	95	52.365	ENSCCAG00000038017	RNASEH1	98	52.365	Cebus_capucinus
ENSORLG00020013660	rnaseh1	87	54.135	ENSCATG00000016515	-	89	54.135	Cercocebus_atys
ENSORLG00020013660	rnaseh1	87	48.352	ENSCATG00000016818	-	89	50.190	Cercocebus_atys
ENSORLG00020013660	rnaseh1	94	54.861	ENSCLAG00000002440	RNASEH1	98	54.861	Chinchilla_lanigera
ENSORLG00020013660	rnaseh1	87	54.135	ENSCSAG00000006943	RNASEH1	89	55.172	Chlorocebus_sabaeus
ENSORLG00020013660	rnaseh1	59	62.500	ENSCHOG00000008547	RNASEH1	74	69.536	Choloepus_hoffmanni
ENSORLG00020013660	rnaseh1	88	55.185	ENSCPBG00000021620	RNASEH1	99	53.791	Chrysemys_picta_bellii
ENSORLG00020013660	rnaseh1	96	36.601	ENSCING00000014054	-	93	37.676	Ciona_intestinalis
ENSORLG00020013660	rnaseh1	74	40.417	ENSCSAVG00000000009	-	96	40.870	Ciona_savignyi
ENSORLG00020013660	rnaseh1	87	54.887	ENSCANG00000037763	RNASEH1	89	54.887	Colobus_angolensis_palliatus
ENSORLG00020013660	rnaseh1	87	56.654	ENSCGRG00001008950	Rnaseh1	89	53.237	Cricetulus_griseus_chok1gshd
ENSORLG00020013660	rnaseh1	87	56.654	ENSCGRG00000006029	Rnaseh1	89	53.237	Cricetulus_griseus_crigri
ENSORLG00020013660	rnaseh1	97	66.779	ENSCSEG00000005741	rnaseh1	98	67.376	Cynoglossus_semilaevis
ENSORLG00020013660	rnaseh1	100	74.593	ENSCVAG00000018717	rnaseh1	100	74.593	Cyprinodon_variegatus
ENSORLG00020013660	rnaseh1	89	65.314	ENSDARG00000042571	rnaseh1	98	65.314	Danio_rerio
ENSORLG00020013660	rnaseh1	87	56.757	ENSDNOG00000016056	RNASEH1	89	56.757	Dasypus_novemcinctus
ENSORLG00020013660	rnaseh1	87	56.870	ENSDORG00000000704	Rnaseh1	89	56.015	Dipodomys_ordii
ENSORLG00020013660	rnaseh1	87	39.863	FBgn0023171	rnh1	92	38.225	Drosophila_melanogaster
ENSORLG00020013660	rnaseh1	88	52.256	ENSETEG00000012674	RNASEH1	89	53.053	Echinops_telfairi
ENSORLG00020013660	rnaseh1	90	46.350	ENSEBUG00000006116	rnaseh1	79	46.667	Eptatretus_burgeri
ENSORLG00020013660	rnaseh1	88	45.704	ENSEBUG00000008898	rnaseh1	99	45.704	Eptatretus_burgeri
ENSORLG00020013660	rnaseh1	95	55.017	ENSEASG00005022200	RNASEH1	97	55.017	Equus_asinus_asinus
ENSORLG00020013660	rnaseh1	95	55.017	ENSECAG00000020695	RNASEH1	97	55.017	Equus_caballus
ENSORLG00020013660	rnaseh1	97	69.257	ENSELUG00000010112	rnaseh1	99	68.581	Esox_lucius
ENSORLG00020013660	rnaseh1	95	52.234	ENSFCAG00000025832	RNASEH1	98	52.721	Felis_catus
ENSORLG00020013660	rnaseh1	95	52.318	ENSFALG00000002069	RNASEH1	99	53.177	Ficedula_albicollis
ENSORLG00020013660	rnaseh1	96	53.846	ENSFDAG00000002035	RNASEH1	87	53.846	Fukomys_damarensis
ENSORLG00020013660	rnaseh1	97	68.403	ENSGMOG00000013818	rnaseh1	99	68.403	Gadus_morhua
ENSORLG00020013660	rnaseh1	95	54.795	ENSGALG00000016389	RNASEH1	98	54.795	Gallus_gallus
ENSORLG00020013660	rnaseh1	97	69.283	ENSGAFG00000001776	rnaseh1	99	69.283	Gambusia_affinis
ENSORLG00020013660	rnaseh1	97	71.380	ENSGACG00000011935	rnaseh1	98	70.847	Gasterosteus_aculeatus
ENSORLG00020013660	rnaseh1	88	56.506	ENSGAGG00000009150	RNASEH1	61	56.506	Gopherus_agassizii
ENSORLG00020013660	rnaseh1	87	55.805	ENSGGOG00000034822	RNASEH1	89	55.805	Gorilla_gorilla
ENSORLG00020013660	rnaseh1	98	73.754	ENSHBUG00000004666	rnaseh1	97	74.751	Haplochromis_burtoni
ENSORLG00020013660	rnaseh1	96	52.234	ENSHGLG00000002585	Rnaseh1	91	52.234	Heterocephalus_glaber_female
ENSORLG00020013660	rnaseh1	96	52.234	ENSHGLG00100005105	Rnaseh1	91	52.234	Heterocephalus_glaber_male
ENSORLG00020013660	rnaseh1	98	68.874	ENSHCOG00000012329	rnaseh1	99	68.874	Hippocampus_comes
ENSORLG00020013660	rnaseh1	97	58.621	ENSIPUG00000023060	rnaseh1	98	60.000	Ictalurus_punctatus
ENSORLG00020013660	rnaseh1	87	55.849	ENSSTOG00000012774	RNASEH1	91	55.849	Ictidomys_tridecemlineatus
ENSORLG00020013660	rnaseh1	86	45.174	ENSJJAG00000008994	-	89	43.529	Jaculus_jaculus
ENSORLG00020013660	rnaseh1	79	53.390	ENSJJAG00000020238	Rnaseh1	90	52.542	Jaculus_jaculus
ENSORLG00020013660	rnaseh1	87	50.965	ENSJJAG00000021481	-	89	49.808	Jaculus_jaculus
ENSORLG00020013660	rnaseh1	94	75.357	ENSKMAG00000001373	rnaseh1	95	75.357	Kryptolebias_marmoratus
ENSORLG00020013660	rnaseh1	99	71.096	ENSLBEG00000004480	rnaseh1	97	77.444	Labrus_bergylta
ENSORLG00020013660	rnaseh1	89	56.272	ENSLACG00000007100	RNASEH1	90	56.989	Latimeria_chalumnae
ENSORLG00020013660	rnaseh1	90	60.714	ENSLOCG00000017212	rnaseh1	100	59.498	Lepisosteus_oculatus
ENSORLG00020013660	rnaseh1	90	56.159	ENSLAFG00000015091	RNASEH1	91	55.224	Loxodonta_africana
ENSORLG00020013660	rnaseh1	91	49.091	ENSMFAG00000002323	-	94	49.632	Macaca_fascicularis
ENSORLG00020013660	rnaseh1	87	54.753	ENSMFAG00000000063	-	89	54.753	Macaca_fascicularis
ENSORLG00020013660	rnaseh1	91	48.601	ENSMMUG00000019280	-	94	48.601	Macaca_mulatta
ENSORLG00020013660	rnaseh1	87	55.133	ENSMNEG00000040183	-	89	55.133	Macaca_nemestrina
ENSORLG00020013660	rnaseh1	91	49.091	ENSMNEG00000029676	-	94	49.632	Macaca_nemestrina
ENSORLG00020013660	rnaseh1	81	54.217	ENSMLEG00000039352	-	98	54.217	Mandrillus_leucophaeus
ENSORLG00020013660	rnaseh1	90	51.471	ENSMLEG00000028662	-	92	51.119	Mandrillus_leucophaeus
ENSORLG00020013660	rnaseh1	99	73.026	ENSMAMG00000019725	rnaseh1	99	75.177	Mastacembelus_armatus
ENSORLG00020013660	rnaseh1	99	72.638	ENSMZEG00005013006	rnaseh1	99	73.616	Maylandia_zebra
ENSORLG00020013660	rnaseh1	78	54.688	ENSMGAG00000013979	RNASEH1	99	54.217	Meleagris_gallopavo
ENSORLG00020013660	rnaseh1	94	54.577	ENSMAUG00000014957	Rnaseh1	95	53.546	Mesocricetus_auratus
ENSORLG00020013660	rnaseh1	87	55.849	ENSMICG00000033156	RNASEH1	88	56.015	Microcebus_murinus
ENSORLG00020013660	rnaseh1	87	57.037	ENSMOCG00000015522	Rnaseh1	89	56.391	Microtus_ochrogaster
ENSORLG00020013660	rnaseh1	99	70.234	ENSMMOG00000015902	rnaseh1	99	70.234	Mola_mola
ENSORLG00020013660	rnaseh1	81	49.174	ENSMODG00000028814	-	96	49.174	Monodelphis_domestica
ENSORLG00020013660	rnaseh1	88	56.705	ENSMODG00000014491	-	89	54.348	Monodelphis_domestica
ENSORLG00020013660	rnaseh1	99	74.000	ENSMALG00000010565	rnaseh1	99	74.000	Monopterus_albus
ENSORLG00020013660	rnaseh1	93	54.643	MGP_CAROLIEiJ_G0017660	Rnaseh1	92	53.929	Mus_caroli
ENSORLG00020013660	rnaseh1	93	55.000	ENSMUSG00000020630	Rnaseh1	92	54.286	Mus_musculus
ENSORLG00020013660	rnaseh1	97	52.614	MGP_PahariEiJ_G0029418	Rnaseh1	99	52.980	Mus_pahari
ENSORLG00020013660	rnaseh1	93	55.000	MGP_SPRETEiJ_G0018502	Rnaseh1	92	53.929	Mus_spretus
ENSORLG00020013660	rnaseh1	58	59.770	ENSMPUG00000012984	RNASEH1	81	61.078	Mustela_putorius_furo
ENSORLG00020013660	rnaseh1	94	54.704	ENSNGAG00000015966	Rnaseh1	90	53.898	Nannospalax_galili
ENSORLG00020013660	rnaseh1	99	72.964	ENSNBRG00000008739	rnaseh1	99	73.941	Neolamprologus_brichardi
ENSORLG00020013660	rnaseh1	87	48.120	ENSNLEG00000015400	RNASEH1	87	47.744	Nomascus_leucogenys
ENSORLG00020013660	rnaseh1	80	49.791	ENSNLEG00000000059	-	88	49.791	Nomascus_leucogenys
ENSORLG00020013660	rnaseh1	95	35.664	ENSMEUG00000003610	-	99	35.664	Notamacropus_eugenii
ENSORLG00020013660	rnaseh1	95	53.287	ENSOPRG00000005072	RNASEH1	96	53.147	Ochotona_princeps
ENSORLG00020013660	rnaseh1	90	57.303	ENSODEG00000000235	Rnaseh1	89	57.303	Octodon_degus
ENSORLG00020013660	rnaseh1	90	76.344	ENSONIG00000018697	rnaseh1	100	76.344	Oreochromis_niloticus
ENSORLG00020013660	rnaseh1	87	56.061	ENSOCUG00000006117	RNASEH1	95	53.684	Oryctolagus_cuniculus
ENSORLG00020013660	rnaseh1	93	99.638	ENSORLG00000018127	rnaseh1	100	99.638	Oryzias_latipes
ENSORLG00020013660	rnaseh1	100	99.329	ENSORLG00015011338	rnaseh1	100	99.329	Oryzias_latipes_hsok
ENSORLG00020013660	rnaseh1	89	85.606	ENSOMEG00000004710	rnaseh1	99	85.606	Oryzias_melastigma
ENSORLG00020013660	rnaseh1	95	54.671	ENSOGAG00000017176	RNASEH1	98	54.671	Otolemur_garnettii
ENSORLG00020013660	rnaseh1	96	48.837	ENSOARG00000005386	RNASEH1	99	47.855	Ovis_aries
ENSORLG00020013660	rnaseh1	87	55.762	ENSPPAG00000034221	RNASEH1	89	55.762	Pan_paniscus
ENSORLG00020013660	rnaseh1	95	52.234	ENSPPRG00000015513	RNASEH1	98	52.881	Panthera_pardus
ENSORLG00020013660	rnaseh1	81	55.102	ENSPTIG00000019034	RNASEH1	83	55.823	Panthera_tigris_altaica
ENSORLG00020013660	rnaseh1	87	55.762	ENSPTRG00000011614	RNASEH1	89	55.762	Pan_troglodytes
ENSORLG00020013660	rnaseh1	89	46.931	ENSPTRG00000043403	-	99	46.931	Pan_troglodytes
ENSORLG00020013660	rnaseh1	87	49.807	ENSPANG00000018246	-	88	49.807	Papio_anubis
ENSORLG00020013660	rnaseh1	87	54.511	ENSPANG00000000443	RNASEH1	97	54.400	Papio_anubis
ENSORLG00020013660	rnaseh1	89	60.650	ENSPKIG00000003146	rnaseh1	99	60.150	Paramormyrops_kingsleyae
ENSORLG00020013660	rnaseh1	95	51.689	ENSPSIG00000002937	RNASEH1	99	52.416	Pelodiscus_sinensis
ENSORLG00020013660	rnaseh1	96	64.111	ENSPMGG00000017463	rnaseh1	99	64.111	Periophthalmus_magnuspinnatus
ENSORLG00020013660	rnaseh1	93	53.957	ENSPEMG00000022465	-	94	54.317	Peromyscus_maniculatus_bairdii
ENSORLG00020013660	rnaseh1	51	35.714	ENSPCIG00000026047	-	87	35.714	Phascolarctos_cinereus
ENSORLG00020013660	rnaseh1	95	53.147	ENSPCIG00000023334	-	99	52.234	Phascolarctos_cinereus
ENSORLG00020013660	rnaseh1	98	69.257	ENSPFOG00000002841	rnaseh1	100	69.257	Poecilia_formosa
ENSORLG00020013660	rnaseh1	72	57.870	ENSPLAG00000021349	-	85	56.481	Poecilia_latipinna
ENSORLG00020013660	rnaseh1	98	69.595	ENSPMEG00000016826	rnaseh1	100	69.595	Poecilia_mexicana
ENSORLG00020013660	rnaseh1	98	68.212	ENSPREG00000012197	rnaseh1	100	68.212	Poecilia_reticulata
ENSORLG00020013660	rnaseh1	80	49.593	ENSPPYG00000008067	-	90	49.593	Pongo_abelii
ENSORLG00020013660	rnaseh1	87	45.865	ENSPPYG00000025873	RNASEH1	88	45.865	Pongo_abelii
ENSORLG00020013660	rnaseh1	88	56.296	ENSPCAG00000002500	RNASEH1	90	55.185	Procavia_capensis
ENSORLG00020013660	rnaseh1	87	49.811	ENSPCOG00000019444	RNASEH1	88	48.148	Propithecus_coquereli
ENSORLG00020013660	rnaseh1	96	49.306	ENSPVAG00000002070	RNASEH1	99	48.958	Pteropus_vampyrus
ENSORLG00020013660	rnaseh1	99	72.638	ENSPNYG00000001292	rnaseh1	99	73.616	Pundamilia_nyererei
ENSORLG00020013660	rnaseh1	97	61.149	ENSPNAG00000022344	rnaseh1	99	60.554	Pygocentrus_nattereri
ENSORLG00020013660	rnaseh1	99	53.465	ENSRNOG00000008584	Rnaseh1	98	53.716	Rattus_norvegicus
ENSORLG00020013660	rnaseh1	87	54.887	ENSRBIG00000034222	RNASEH1	88	54.887	Rhinopithecus_bieti
ENSORLG00020013660	rnaseh1	87	54.511	ENSRROG00000041761	RNASEH1	88	54.511	Rhinopithecus_roxellana
ENSORLG00020013660	rnaseh1	87	47.727	YMR234W	-	98	35.294	Saccharomyces_cerevisiae
ENSORLG00020013660	rnaseh1	95	51.689	ENSSBOG00000025411	RNASEH1	98	51.689	Saimiri_boliviensis_boliviensis
ENSORLG00020013660	rnaseh1	97	52.381	ENSSHAG00000013051	RNASEH1	98	52.381	Sarcophilus_harrisii
ENSORLG00020013660	rnaseh1	97	59.794	ENSSFOG00015002709	rnaseh1	100	60.137	Scleropages_formosus
ENSORLG00020013660	rnaseh1	99	75.083	ENSSMAG00000007586	rnaseh1	99	75.083	Scophthalmus_maximus
ENSORLG00020013660	rnaseh1	97	75.085	ENSSDUG00000008217	rnaseh1	98	76.703	Seriola_dumerili
ENSORLG00020013660	rnaseh1	96	69.204	ENSSLDG00000000442	rnaseh1	95	76.772	Seriola_lalandi_dorsalis
ENSORLG00020013660	rnaseh1	89	54.380	ENSSPUG00000006644	RNASEH1	93	54.182	Sphenodon_punctatus
ENSORLG00020013660	rnaseh1	99	75.748	ENSSPAG00000009353	rnaseh1	99	75.748	Stegastes_partitus
ENSORLG00020013660	rnaseh1	88	55.431	ENSSSCG00000025305	RNASEH1	99	51.903	Sus_scrofa
ENSORLG00020013660	rnaseh1	88	55.036	ENSTGUG00000012980	RNASEH1	93	55.556	Taeniopygia_guttata
ENSORLG00020013660	rnaseh1	93	73.592	ENSTRUG00000015774	rnaseh1	99	73.741	Takifugu_rubripes
ENSORLG00020013660	rnaseh1	90	77.407	ENSTNIG00000010715	rnaseh1	97	76.667	Tetraodon_nigroviridis
ENSORLG00020013660	rnaseh1	96	50.168	ENSTTRG00000001615	RNASEH1	99	50.168	Tursiops_truncatus
ENSORLG00020013660	rnaseh1	50	65.772	ENSUAMG00000018254	RNASEH1	77	65.772	Ursus_americanus
ENSORLG00020013660	rnaseh1	67	53.431	ENSUMAG00000003941	RNASEH1	65	51.905	Ursus_maritimus
ENSORLG00020013660	rnaseh1	96	46.959	ENSVPAG00000011589	RNASEH1	99	46.959	Vicugna_pacos
ENSORLG00020013660	rnaseh1	95	53.448	ENSVVUG00000008633	RNASEH1	88	53.448	Vulpes_vulpes
ENSORLG00020013660	rnaseh1	87	40.927	ENSXETG00000030371	-	99	39.768	Xenopus_tropicalis
ENSORLG00020013660	rnaseh1	97	51.000	ENSXETG00000001212	rnaseh1	100	49.667	Xenopus_tropicalis
ENSORLG00020013660	rnaseh1	97	69.492	ENSXMAG00000002357	rnaseh1	99	69.492	Xiphophorus_maculatus