EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020013745 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 3403 bases
Position: chr17:11111623-11115025
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020012804	Ribonuc_P_40	PF08584.11	1.2e-78	1	1
ENSORLP00020012821	Ribonuc_P_40	PF08584.11	1.8e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020020076	-	1547	-	ENSORLP00020012804	381 (aa)	-	-
ENSORLT00020032373	-	1646	-	ENSORLP00020012821	414 (aa)	-	-

Gene Model

Click here to download ENSORLG00020013745's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020013745's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020013745	-	91	37.222	ENSG00000124787	RPP40	99	37.222	Homo_sapiens
ENSORLG00020013745	-	86	54.079	ENSAPOG00000008660	rpp40	99	54.079	Acanthochromis_polyacanthus
ENSORLG00020013745	-	91	36.667	ENSAMEG00000012938	RPP40	99	36.667	Ailuropoda_melanoleuca
ENSORLG00020013745	-	91	61.972	ENSACIG00000003617	rpp40	99	61.408	Amphilophus_citrinellus
ENSORLG00020013745	-	90	71.387	ENSAOCG00000011846	rpp40	99	71.387	Amphiprion_ocellaris
ENSORLG00020013745	-	90	71.387	ENSAPEG00000001322	rpp40	99	71.387	Amphiprion_percula
ENSORLG00020013745	-	90	66.954	ENSATEG00000006584	rpp40	99	67.241	Anabas_testudineus
ENSORLG00020013745	-	76	37.748	ENSAPLG00000005691	RPP40	99	37.748	Anas_platyrhynchos
ENSORLG00020013745	-	91	39.889	ENSACAG00000006550	RPP40	88	39.889	Anolis_carolinensis
ENSORLG00020013745	-	91	35.278	ENSANAG00000029246	RPP40	99	35.278	Aotus_nancymaae
ENSORLG00020013745	-	89	70.882	ENSACLG00000015883	rpp40	96	70.882	Astatotilapia_calliptera
ENSORLG00020013745	-	90	43.944	ENSAMXG00000001755	rpp40	99	43.944	Astyanax_mexicanus
ENSORLG00020013745	-	91	37.778	ENSBTAG00000003332	RPP40	99	37.778	Bos_taurus
ENSORLG00020013745	-	91	36.389	ENSCJAG00000021373	RPP40	99	36.389	Callithrix_jacchus
ENSORLG00020013745	-	91	37.500	ENSCAFG00000009435	RPP40	99	37.500	Canis_familiaris
ENSORLG00020013745	-	91	37.500	ENSCAFG00020013380	RPP40	99	37.500	Canis_lupus_dingo
ENSORLG00020013745	-	91	37.047	ENSCHIG00000016849	RPP40	99	37.333	Capra_hircus
ENSORLG00020013745	-	91	36.389	ENSTSYG00000032857	RPP40	99	36.111	Carlito_syrichta
ENSORLG00020013745	-	81	34.472	ENSCAPG00000004957	RPP40	96	34.472	Cavia_aperea
ENSORLG00020013745	-	91	38.333	ENSCPOG00000005855	RPP40	99	38.333	Cavia_porcellus
ENSORLG00020013745	-	91	36.389	ENSCCAG00000019809	RPP40	99	36.389	Cebus_capucinus
ENSORLG00020013745	-	91	37.222	ENSCATG00000038787	RPP40	99	37.222	Cercocebus_atys
ENSORLG00020013745	-	91	37.500	ENSCLAG00000003235	RPP40	99	37.500	Chinchilla_lanigera
ENSORLG00020013745	-	91	37.500	ENSCSAG00000007307	RPP40	99	37.500	Chlorocebus_sabaeus
ENSORLG00020013745	-	91	38.674	ENSCPBG00000009003	RPP40	99	38.674	Chrysemys_picta_bellii
ENSORLG00020013745	-	91	37.222	ENSCANG00000033965	RPP40	99	37.222	Colobus_angolensis_palliatus
ENSORLG00020013745	-	89	35.795	ENSCGRG00001018328	Rpp40	97	35.795	Cricetulus_griseus_chok1gshd
ENSORLG00020013745	-	89	35.795	ENSCGRG00000011344	Rpp40	97	35.795	Cricetulus_griseus_crigri
ENSORLG00020013745	-	88	55.621	ENSCSEG00000015006	-	97	55.325	Cynoglossus_semilaevis
ENSORLG00020013745	-	67	52.510	ENSCVAG00000012169	rpp40	100	50.579	Cyprinodon_variegatus
ENSORLG00020013745	-	90	46.648	ENSDARG00000017605	rpp40	99	46.648	Danio_rerio
ENSORLG00020013745	-	72	36.014	ENSDNOG00000048136	RPP40	96	36.014	Dasypus_novemcinctus
ENSORLG00020013745	-	91	30.978	ENSDORG00000011196	-	99	30.978	Dipodomys_ordii
ENSORLG00020013745	-	91	36.667	ENSDORG00000029944	-	99	36.667	Dipodomys_ordii
ENSORLG00020013745	-	87	36.311	ENSEBUG00000000386	rpp40	99	35.826	Eptatretus_burgeri
ENSORLG00020013745	-	93	37.027	ENSEASG00005012116	RPP40	81	37.027	Equus_asinus_asinus
ENSORLG00020013745	-	93	37.297	ENSECAG00000017247	RPP40	81	37.297	Equus_caballus
ENSORLG00020013745	-	72	32.281	ENSEEUG00000012087	RPP40	96	32.281	Erinaceus_europaeus
ENSORLG00020013745	-	90	47.899	ENSELUG00000017004	rpp40	99	47.899	Esox_lucius
ENSORLG00020013745	-	91	36.667	ENSFCAG00000009249	RPP40	99	36.667	Felis_catus
ENSORLG00020013745	-	78	37.538	ENSFALG00000013166	RPP40	99	37.538	Ficedula_albicollis
ENSORLG00020013745	-	91	36.944	ENSFDAG00000013001	-	99	36.944	Fukomys_damarensis
ENSORLG00020013745	-	73	32.069	ENSFDAG00000000265	-	99	32.069	Fukomys_damarensis
ENSORLG00020013745	-	93	67.877	ENSFHEG00000021429	rpp40	92	67.877	Fundulus_heteroclitus
ENSORLG00020013745	-	81	42.271	ENSGMOG00000018653	rpp40	100	42.271	Gadus_morhua
ENSORLG00020013745	-	91	36.389	ENSGALG00000036074	RPP40	99	36.389	Gallus_gallus
ENSORLG00020013745	-	76	54.949	ENSGAFG00000004189	-	100	54.949	Gambusia_affinis
ENSORLG00020013745	-	90	66.000	ENSGACG00000002472	rpp40	99	66.000	Gasterosteus_aculeatus
ENSORLG00020013745	-	91	39.227	ENSGAGG00000012918	RPP40	99	39.227	Gopherus_agassizii
ENSORLG00020013745	-	91	37.222	ENSGGOG00000013764	RPP40	99	37.222	Gorilla_gorilla
ENSORLG00020013745	-	84	66.358	ENSHBUG00000009378	rpp40	96	66.358	Haplochromis_burtoni
ENSORLG00020013745	-	91	37.500	ENSHGLG00000004871	RPP40	99	37.500	Heterocephalus_glaber_female
ENSORLG00020013745	-	91	37.500	ENSHGLG00100002080	RPP40	99	37.500	Heterocephalus_glaber_male
ENSORLG00020013745	-	90	48.711	ENSHCOG00000013264	-	95	48.711	Hippocampus_comes
ENSORLG00020013745	-	91	45.251	ENSIPUG00000008951	RPP40	99	45.251	Ictalurus_punctatus
ENSORLG00020013745	-	91	36.111	ENSSTOG00000011199	RPP40	99	36.111	Ictidomys_tridecemlineatus
ENSORLG00020013745	-	91	37.326	ENSJJAG00000020629	Rpp40	99	37.326	Jaculus_jaculus
ENSORLG00020013745	-	90	68.786	ENSKMAG00000019358	rpp40	99	68.786	Kryptolebias_marmoratus
ENSORLG00020013745	-	90	66.097	ENSLBEG00000022724	rpp40	99	66.097	Labrus_bergylta
ENSORLG00020013745	-	90	41.274	ENSLACG00000014848	RPP40	99	41.274	Latimeria_chalumnae
ENSORLG00020013745	-	91	44.598	ENSLOCG00000011650	rpp40	99	44.598	Lepisosteus_oculatus
ENSORLG00020013745	-	75	38.926	ENSLAFG00000007530	RPP40	98	38.926	Loxodonta_africana
ENSORLG00020013745	-	91	37.222	ENSMFAG00000043100	RPP40	99	37.222	Macaca_fascicularis
ENSORLG00020013745	-	91	37.222	ENSMMUG00000004966	RPP40	99	37.222	Macaca_mulatta
ENSORLG00020013745	-	91	37.222	ENSMNEG00000041986	RPP40	99	37.222	Macaca_nemestrina
ENSORLG00020013745	-	89	33.523	ENSMLEG00000040851	RPP40	98	33.523	Mandrillus_leucophaeus
ENSORLG00020013745	-	90	69.364	ENSMAMG00000019551	rpp40	99	69.364	Mastacembelus_armatus
ENSORLG00020013745	-	90	71.098	ENSMZEG00005019475	rpp40	99	71.098	Maylandia_zebra
ENSORLG00020013745	-	89	37.183	ENSMGAG00000004009	RPP40	98	37.183	Meleagris_gallopavo
ENSORLG00020013745	-	91	35.833	ENSMAUG00000010268	Rpp40	99	35.833	Mesocricetus_auratus
ENSORLG00020013745	-	96	37.566	ENSMICG00000003297	RPP40	99	35.475	Microcebus_murinus
ENSORLG00020013745	-	91	36.944	ENSMOCG00000000305	Rpp40	99	36.944	Microtus_ochrogaster
ENSORLG00020013745	-	90	56.395	ENSMMOG00000020591	-	99	55.523	Mola_mola
ENSORLG00020013745	-	91	36.565	ENSMODG00000009826	RPP40	97	37.110	Monodelphis_domestica
ENSORLG00020013745	-	90	69.364	ENSMALG00000020133	rpp40	99	69.364	Monopterus_albus
ENSORLG00020013745	-	91	36.111	MGP_CAROLIEiJ_G0018429	Rpp40	99	36.111	Mus_caroli
ENSORLG00020013745	-	91	36.389	ENSMUSG00000021418	Rpp40	99	36.389	Mus_musculus
ENSORLG00020013745	-	91	36.667	MGP_PahariEiJ_G0019497	Rpp40	99	36.667	Mus_pahari
ENSORLG00020013745	-	91	35.833	MGP_SPRETEiJ_G0019309	Rpp40	99	35.833	Mus_spretus
ENSORLG00020013745	-	91	37.222	ENSMPUG00000000530	RPP40	93	37.222	Mustela_putorius_furo
ENSORLG00020013745	-	91	38.611	ENSMLUG00000000501	RPP40	99	38.611	Myotis_lucifugus
ENSORLG00020013745	-	86	34.911	ENSNGAG00000022529	-	98	34.911	Nannospalax_galili
ENSORLG00020013745	-	91	36.667	ENSNGAG00000023955	-	99	36.667	Nannospalax_galili
ENSORLG00020013745	-	80	65.273	ENSNBRG00000017465	rpp40	87	64.669	Neolamprologus_brichardi
ENSORLG00020013745	-	91	37.222	ENSNLEG00000034397	RPP40	99	37.222	Nomascus_leucogenys
ENSORLG00020013745	-	91	32.500	ENSMEUG00000005300	RPP40	99	32.500	Notamacropus_eugenii
ENSORLG00020013745	-	91	37.778	ENSODEG00000007255	-	99	37.778	Octodon_degus
ENSORLG00020013745	-	89	36.857	ENSODEG00000018153	-	97	36.857	Octodon_degus
ENSORLG00020013745	-	81	33.540	ENSODEG00000006170	-	100	33.540	Octodon_degus
ENSORLG00020013745	-	90	70.520	ENSONIG00000014016	rpp40	99	70.520	Oreochromis_niloticus
ENSORLG00020013745	-	75	39.465	ENSOANG00000001200	RPP40	98	39.465	Ornithorhynchus_anatinus
ENSORLG00020013745	-	90	37.151	ENSOCUG00000000354	RPP40	99	37.151	Oryctolagus_cuniculus
ENSORLG00020013745	-	92	98.153	ENSORLG00000008242	-	100	98.266	Oryzias_latipes
ENSORLG00020013745	-	91	98.266	ENSORLG00015000887	-	100	98.266	Oryzias_latipes_hsok
ENSORLG00020013745	-	91	92.197	ENSOMEG00000002747	rpp40	100	92.197	Oryzias_melastigma
ENSORLG00020013745	-	91	38.056	ENSOGAG00000006055	RPP40	99	38.056	Otolemur_garnettii
ENSORLG00020013745	-	81	37.037	ENSOARG00000018783	RPP40	99	38.000	Ovis_aries
ENSORLG00020013745	-	91	37.222	ENSPPAG00000023703	RPP40	99	37.222	Pan_paniscus
ENSORLG00020013745	-	91	36.667	ENSPPRG00000005612	RPP40	99	36.667	Panthera_pardus
ENSORLG00020013745	-	91	35.000	ENSPTIG00000018847	RPP40	99	34.160	Panthera_tigris_altaica
ENSORLG00020013745	-	91	36.667	ENSPTRG00000017690	RPP40	99	36.667	Pan_troglodytes
ENSORLG00020013745	-	91	37.222	ENSPANG00000017865	RPP40	99	37.222	Papio_anubis
ENSORLG00020013745	-	90	43.978	ENSPKIG00000006311	rpp40	99	43.978	Paramormyrops_kingsleyae
ENSORLG00020013745	-	54	40.271	ENSPSIG00000007854	RPP40	99	40.271	Pelodiscus_sinensis
ENSORLG00020013745	-	73	32.877	ENSPEMG00000020809	Rpp40	85	32.877	Peromyscus_maniculatus_bairdii
ENSORLG00020013745	-	69	37.410	ENSPMAG00000008412	rpp40	99	36.232	Petromyzon_marinus
ENSORLG00020013745	-	91	36.389	ENSPCIG00000010682	RPP40	99	36.389	Phascolarctos_cinereus
ENSORLG00020013745	-	90	62.356	ENSPFOG00000011460	rpp40	99	62.356	Poecilia_formosa
ENSORLG00020013745	-	90	63.295	ENSPLAG00000001334	rpp40	99	63.295	Poecilia_latipinna
ENSORLG00020013745	-	90	63.006	ENSPMEG00000007721	rpp40	99	63.006	Poecilia_mexicana
ENSORLG00020013745	-	90	63.584	ENSPREG00000009215	rpp40	99	63.584	Poecilia_reticulata
ENSORLG00020013745	-	91	36.944	ENSPPYG00000016194	RPP40	99	36.944	Pongo_abelii
ENSORLG00020013745	-	91	37.222	ENSPCOG00000003907	RPP40	99	37.222	Propithecus_coquereli
ENSORLG00020013745	-	91	37.222	ENSPVAG00000011325	RPP40	99	37.222	Pteropus_vampyrus
ENSORLG00020013745	-	76	67.354	ENSPNYG00000004432	rpp40	100	65.979	Pundamilia_nyererei
ENSORLG00020013745	-	90	44.134	ENSPNAG00000019125	rpp40	99	44.134	Pygocentrus_nattereri
ENSORLG00020013745	-	91	36.667	ENSRNOG00000016226	Rpp40	99	36.667	Rattus_norvegicus
ENSORLG00020013745	-	91	36.944	ENSRBIG00000035800	RPP40	99	36.944	Rhinopithecus_bieti
ENSORLG00020013745	-	91	36.944	ENSRROG00000039116	RPP40	99	36.944	Rhinopithecus_roxellana
ENSORLG00020013745	-	91	36.389	ENSSBOG00000020297	RPP40	99	36.389	Saimiri_boliviensis_boliviensis
ENSORLG00020013745	-	69	37.818	ENSSHAG00000002102	RPP40	99	37.818	Sarcophilus_harrisii
ENSORLG00020013745	-	93	46.070	ENSSFOG00015001142	rpp40	83	46.070	Scleropages_formosus
ENSORLG00020013745	-	90	69.231	ENSSDUG00000007202	rpp40	99	69.231	Seriola_dumerili
ENSORLG00020013745	-	90	68.661	ENSSLDG00000017563	rpp40	99	68.661	Seriola_lalandi_dorsalis
ENSORLG00020013745	-	91	37.845	ENSSPUG00000017487	-	99	37.845	Sphenodon_punctatus
ENSORLG00020013745	-	74	36.949	ENSSPUG00000018950	-	100	36.949	Sphenodon_punctatus
ENSORLG00020013745	-	90	69.942	ENSSPAG00000022716	rpp40	99	69.942	Stegastes_partitus
ENSORLG00020013745	-	89	38.352	ENSSSCG00000000998	RPP40	99	38.079	Sus_scrofa
ENSORLG00020013745	-	90	38.936	ENSTGUG00000002258	-	99	38.936	Taeniopygia_guttata
ENSORLG00020013745	-	91	66.006	ENSTRUG00000003755	rpp40	100	66.006	Takifugu_rubripes
ENSORLG00020013745	-	91	60.907	ENSTNIG00000003077	rpp40	99	60.907	Tetraodon_nigroviridis
ENSORLG00020013745	-	90	33.053	ENSTTRG00000007319	RPP40	99	33.053	Tursiops_truncatus
ENSORLG00020013745	-	91	36.389	ENSUAMG00000002159	RPP40	99	36.389	Ursus_americanus
ENSORLG00020013745	-	95	35.544	ENSUMAG00000018639	RPP40	97	35.544	Ursus_maritimus
ENSORLG00020013745	-	91	37.222	ENSVVUG00000005451	RPP40	99	37.222	Vulpes_vulpes
ENSORLG00020013745	-	91	36.842	ENSXETG00000017617	rpp40	99	36.842	Xenopus_tropicalis
ENSORLG00020013745	-	91	47.645	ENSXMAG00000024940	rpp40	100	48.199	Xiphophorus_maculatus