EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020013747 (Gene tree)
Gene ID: -
Gene Symbol: rab11al
Alias: -
Full Name: ras-related protein Rab-11A
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 9043 bases
Position: chr16:26939992-26949034
Accession: 101171030
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020012815	MMR_HSR1	PF01926.23	3.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020020088	-	1257	-	ENSORLP00020012815	216 (aa)	XP_004078415	H2MN83

Gene Model

Click here to download ENSORLG00020013747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020013747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020013747	rab11al	79	33.333	ENSORLG00020010041	rab34a	66	33.333
ENSORLG00020013747	rab11al	96	47.596	ENSORLG00020000892	rab1ab	99	47.596
ENSORLG00020013747	rab11al	78	44.379	ENSORLG00020008333	rab18a	96	41.837
ENSORLG00020013747	rab11al	96	45.894	ENSORLG00020021697	-	99	45.894
ENSORLG00020013747	rab11al	94	36.058	ENSORLG00020009158	rab9b	93	36.058
ENSORLG00020013747	rab11al	74	47.500	ENSORLG00020015288	rab30	79	47.500
ENSORLG00020013747	rab11al	71	30.303	ENSORLG00020018922	rasl11a	64	30.303
ENSORLG00020013747	rab11al	98	59.242	ENSORLG00020013719	rab25b	99	59.901
ENSORLG00020013747	rab11al	69	35.333	ENSORLG00020013690	zgc:55558	86	36.420
ENSORLG00020013747	rab11al	75	36.646	ENSORLG00020000604	rab41	76	36.025
ENSORLG00020013747	rab11al	95	46.759	ENSORLG00020020035	rab2a	99	46.759
ENSORLG00020013747	rab11al	71	34.375	ENSORLG00020019465	si:dkey-13a21.4	77	34.375
ENSORLG00020013747	rab11al	93	31.100	ENSORLG00020010772	rab6ba	93	31.100
ENSORLG00020013747	rab11al	69	35.333	ENSORLG00020008129	hras	85	36.420
ENSORLG00020013747	rab11al	96	64.904	ENSORLG00020020811	rab25a	68	64.904
ENSORLG00020013747	rab11al	99	83.333	ENSORLG00020020816	rab11ba	99	83.333
ENSORLG00020013747	rab11al	79	37.572	ENSORLG00020012685	zgc:101559	74	37.572
ENSORLG00020013747	rab11al	75	41.975	ENSORLG00020004905	RAB15	78	41.975
ENSORLG00020013747	rab11al	96	45.714	ENSORLG00020021071	zgc:171927	99	45.714
ENSORLG00020013747	rab11al	77	46.746	ENSORLG00020019269	RAB39B	79	46.746
ENSORLG00020013747	rab11al	73	40.491	ENSORLG00020020266	rab33a	59	40.491
ENSORLG00020013747	rab11al	78	39.884	ENSORLG00020005952	rab7a	82	39.884
ENSORLG00020013747	rab11al	94	41.148	ENSORLG00020020922	rab5aa	90	41.148
ENSORLG00020013747	rab11al	99	83.028	ENSORLG00020019393	rab11bb	99	83.028
ENSORLG00020013747	rab11al	99	82.407	ENSORLG00020020844	RAB11B	99	82.407
ENSORLG00020013747	rab11al	72	31.013	ENSORLG00020012306	si:ch73-116o1.2	81	32.941
ENSORLG00020013747	rab11al	66	33.333	ENSORLG00020005258	rerg	71	33.333
ENSORLG00020013747	rab11al	72	40.373	ENSORLG00020000483	rab9a	80	40.373
ENSORLG00020013747	rab11al	77	53.012	ENSORLG00020018986	rab14	73	53.012
ENSORLG00020013747	rab11al	74	40.854	ENSORLG00020008512	-	81	40.854
ENSORLG00020013747	rab11al	84	37.363	ENSORLG00020021663	rab3db	91	35.577
ENSORLG00020013747	rab11al	74	45.283	ENSORLG00020018259	rab15	75	45.283
ENSORLG00020013747	rab11al	93	33.168	ENSORLG00020001816	rab6a	93	33.168
ENSORLG00020013747	rab11al	79	36.413	ENSORLG00020018196	rab33ba	77	36.413
ENSORLG00020013747	rab11al	93	32.178	ENSORLG00020013337	rab6bb	93	32.178
ENSORLG00020013747	rab11al	73	48.408	ENSORLG00020008388	rab5c	72	48.408
ENSORLG00020013747	rab11al	84	42.623	ENSORLG00020013895	rab42a	84	42.623
ENSORLG00020013747	rab11al	74	32.919	ENSORLG00020002801	rheb	87	32.919
ENSORLG00020013747	rab11al	96	33.645	ENSORLG00020020277	si:dkey-34d22.5	98	33.645
ENSORLG00020013747	rab11al	93	42.289	ENSORLG00020009535	-	96	42.289
ENSORLG00020013747	rab11al	73	35.849	ENSORLG00020001721	rabl2	68	35.849
ENSORLG00020013747	rab11al	87	40.741	ENSORLG00020005131	rab12	84	38.095
ENSORLG00020013747	rab11al	93	40.099	ENSORLG00020015717	-	78	40.099
ENSORLG00020013747	rab11al	81	44.253	ENSORLG00020000867	si:dkey-16l2.16	82	44.253
ENSORLG00020013747	rab11al	77	32.948	ENSORLG00020005240	RAB29	84	32.948
ENSORLG00020013747	rab11al	53	30.252	ENSORLG00020007137	arl4cb	60	30.252
ENSORLG00020013747	rab11al	68	43.137	ENSORLG00020013870	-	63	43.137
ENSORLG00020013747	rab11al	75	46.296	ENSORLG00020011590	rab18b	79	46.296
ENSORLG00020013747	rab11al	87	34.043	ENSORLG00020020220	rab23	94	34.300
ENSORLG00020013747	rab11al	69	34.667	ENSORLG00020020961	kras	90	35.802

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020013747	rab11al	100	94.444	ENSAPOG00000008251	rab11al	100	94.444	Acanthochromis_polyacanthus
ENSORLG00020013747	rab11al	100	95.833	ENSACIG00000017403	rab11al	100	95.833	Amphilophus_citrinellus
ENSORLG00020013747	rab11al	100	96.759	ENSAOCG00000015678	rab11al	100	96.759	Amphiprion_ocellaris
ENSORLG00020013747	rab11al	100	96.759	ENSAPEG00000022135	rab11al	100	96.759	Amphiprion_percula
ENSORLG00020013747	rab11al	100	94.907	ENSATEG00000006156	rab11al	100	94.907	Anabas_testudineus
ENSORLG00020013747	rab11al	100	96.759	ENSACLG00000010268	rab11al	100	96.759	Astatotilapia_calliptera
ENSORLG00020013747	rab11al	94	85.714	ENSAMXG00000024632	rab11al	93	85.714	Astyanax_mexicanus
ENSORLG00020013747	rab11al	94	80.198	ENSCPBG00000025819	-	99	80.198	Chrysemys_picta_bellii
ENSORLG00020013747	rab11al	100	95.833	ENSCSEG00000011996	rab11al	100	95.833	Cynoglossus_semilaevis
ENSORLG00020013747	rab11al	100	94.444	ENSCVAG00000020016	rab11al	100	94.444	Cyprinodon_variegatus
ENSORLG00020013747	rab11al	100	91.204	ENSDARG00000014340	rab11al	100	91.204	Danio_rerio
ENSORLG00020013747	rab11al	100	94.444	ENSELUG00000012035	rab11al	100	94.444	Esox_lucius
ENSORLG00020013747	rab11al	99	80.930	ENSFALG00000002594	-	91	80.930	Ficedula_albicollis
ENSORLG00020013747	rab11al	96	94.231	ENSFHEG00000000832	rab11al	99	94.231	Fundulus_heteroclitus
ENSORLG00020013747	rab11al	94	89.109	ENSGMOG00000006450	rab11al	100	89.109	Gadus_morhua
ENSORLG00020013747	rab11al	99	78.605	ENSGALG00000037802	-	50	78.605	Gallus_gallus
ENSORLG00020013747	rab11al	100	94.444	ENSGAFG00000021725	rab11al	100	94.444	Gambusia_affinis
ENSORLG00020013747	rab11al	100	95.833	ENSGACG00000013259	rab11al	100	95.833	Gasterosteus_aculeatus
ENSORLG00020013747	rab11al	99	80.465	ENSGAGG00000020702	-	99	80.465	Gopherus_agassizii
ENSORLG00020013747	rab11al	100	96.759	ENSHBUG00000009333	rab11al	100	96.759	Haplochromis_burtoni
ENSORLG00020013747	rab11al	100	95.370	ENSHCOG00000000232	rab11al	100	95.370	Hippocampus_comes
ENSORLG00020013747	rab11al	100	91.667	ENSIPUG00000006091	RAB11A	100	91.667	Ictalurus_punctatus
ENSORLG00020013747	rab11al	100	90.278	ENSKMAG00000015516	rab11al	100	90.278	Kryptolebias_marmoratus
ENSORLG00020013747	rab11al	100	95.370	ENSLBEG00000016417	rab11al	100	95.370	Labrus_bergylta
ENSORLG00020013747	rab11al	99	80.000	ENSLACG00000011380	rab11al	99	80.000	Latimeria_chalumnae
ENSORLG00020013747	rab11al	100	93.981	ENSLOCG00000008865	rab11al	100	93.981	Lepisosteus_oculatus
ENSORLG00020013747	rab11al	100	96.296	ENSMAMG00000010278	rab11al	100	96.296	Mastacembelus_armatus
ENSORLG00020013747	rab11al	100	96.759	ENSMZEG00005017514	rab11al	100	96.759	Maylandia_zebra
ENSORLG00020013747	rab11al	75	90.062	ENSMGAG00000004720	-	95	90.062	Meleagris_gallopavo
ENSORLG00020013747	rab11al	79	97.661	ENSMMOG00000017117	rab11al	84	97.661	Mola_mola
ENSORLG00020013747	rab11al	100	93.981	ENSMALG00000004093	rab11al	100	93.981	Monopterus_albus
ENSORLG00020013747	rab11al	100	97.222	ENSNBRG00000005116	rab11al	100	97.222	Neolamprologus_brichardi
ENSORLG00020013747	rab11al	100	96.296	ENSONIG00000002281	rab11al	100	96.296	Oreochromis_niloticus
ENSORLG00020013747	rab11al	100	100.000	ENSORLG00000016126	rab11al	100	100.000	Oryzias_latipes
ENSORLG00020013747	rab11al	100	100.000	ENSORLG00015019591	rab11al	100	100.000	Oryzias_latipes_hsok
ENSORLG00020013747	rab11al	100	98.148	ENSOMEG00000020271	rab11al	100	98.148	Oryzias_melastigma
ENSORLG00020013747	rab11al	100	90.741	ENSPKIG00000020893	rab11al	100	90.741	Paramormyrops_kingsleyae
ENSORLG00020013747	rab11al	99	79.070	ENSPSIG00000013143	-	99	79.070	Pelodiscus_sinensis
ENSORLG00020013747	rab11al	100	92.130	ENSPMGG00000004220	rab11al	100	92.130	Periophthalmus_magnuspinnatus
ENSORLG00020013747	rab11al	100	93.519	ENSPFOG00000011316	rab11al	100	93.519	Poecilia_formosa
ENSORLG00020013747	rab11al	100	93.519	ENSPLAG00000007986	rab11al	100	93.519	Poecilia_latipinna
ENSORLG00020013747	rab11al	100	93.519	ENSPMEG00000000804	rab11al	100	93.519	Poecilia_mexicana
ENSORLG00020013747	rab11al	100	93.519	ENSPREG00000017324	rab11al	100	93.519	Poecilia_reticulata
ENSORLG00020013747	rab11al	100	96.759	ENSPNYG00000018244	rab11al	100	96.759	Pundamilia_nyererei
ENSORLG00020013747	rab11al	100	92.130	ENSPNAG00000029085	rab11al	100	92.130	Pygocentrus_nattereri
ENSORLG00020013747	rab11al	100	92.130	ENSSFOG00015008618	rab11al	100	92.130	Scleropages_formosus
ENSORLG00020013747	rab11al	100	94.907	ENSSMAG00000016206	rab11al	100	94.907	Scophthalmus_maximus
ENSORLG00020013747	rab11al	100	95.833	ENSSDUG00000006278	rab11al	100	95.833	Seriola_dumerili
ENSORLG00020013747	rab11al	100	95.833	ENSSLDG00000012116	rab11al	100	95.833	Seriola_lalandi_dorsalis
ENSORLG00020013747	rab11al	99	78.241	ENSSPUG00000002526	-	99	78.241	Sphenodon_punctatus
ENSORLG00020013747	rab11al	100	95.833	ENSSPAG00000012044	rab11al	100	95.833	Stegastes_partitus
ENSORLG00020013747	rab11al	94	83.663	ENSTGUG00000003680	-	99	83.663	Taeniopygia_guttata
ENSORLG00020013747	rab11al	99	94.860	ENSTRUG00000007556	rab11al	99	94.860	Takifugu_rubripes
ENSORLG00020013747	rab11al	100	93.519	ENSXCOG00000004226	rab11al	100	93.519	Xiphophorus_couchianus
ENSORLG00020013747	rab11al	100	93.519	ENSXMAG00000027071	rab11al	100	93.519	Xiphophorus_maculatus