EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020014046 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 14101 bases
Position: chr9:29019778-29033878
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020013066	PARP	PF00644.20	2.3e-28	1	1
ENSORLP00020013085	PARP	PF00644.20	8.3e-28	1	1
ENSORLP00020013109	PARP	PF00644.20	6.1e-26	1	1
ENSORLP00020013100	PARP	PF00644.20	3.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020020453	-	1777	-	ENSORLP00020013085	388 (aa)	-	-
ENSORLT00020032480	-	1362	-	ENSORLP00020013066	252 (aa)	-	-
ENSORLT00020032489	-	1479	-	ENSORLP00020013100	492 (aa)	-	-
ENSORLT00020032495	-	1053	-	ENSORLP00020013109	350 (aa)	-	-

Gene Model

Click here to download ENSORLG00020014046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020014046's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020014046	-	69	40.678	ENSORLG00020021728	-	79	37.788
ENSORLG00020014046	-	100	68.750	ENSORLG00020014210	-	100	63.696
ENSORLG00020014046	-	77	35.211	ENSORLG00020014836	PARP11	62	35.211

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020014046	-	90	62.975	ENSACIG00000014929	-	86	62.975	Amphilophus_citrinellus
ENSORLG00020014046	-	63	59.146	ENSACIG00000008604	-	85	58.659	Amphilophus_citrinellus
ENSORLG00020014046	-	73	45.098	ENSACIG00000005931	-	73	69.565	Amphilophus_citrinellus
ENSORLG00020014046	-	63	60.366	ENSACIG00000001702	-	90	62.000	Amphilophus_citrinellus
ENSORLG00020014046	-	100	63.241	ENSAOCG00000020608	-	99	57.339	Amphiprion_ocellaris
ENSORLG00020014046	-	100	64.567	ENSAPEG00000022069	-	100	54.212	Amphiprion_percula
ENSORLG00020014046	-	100	65.000	ENSATEG00000012173	-	94	65.051	Anabas_testudineus
ENSORLG00020014046	-	100	68.482	ENSACLG00000005600	-	100	67.059	Astatotilapia_calliptera
ENSORLG00020014046	-	100	62.257	ENSACLG00000005627	-	95	62.466	Astatotilapia_calliptera
ENSORLG00020014046	-	98	54.762	ENSAMXG00000031328	-	96	51.282	Astyanax_mexicanus
ENSORLG00020014046	-	99	54.902	ENSAMXG00000010091	-	75	46.529	Astyanax_mexicanus
ENSORLG00020014046	-	99	60.784	ENSCSEG00000009834	-	99	61.585	Cynoglossus_semilaevis
ENSORLG00020014046	-	100	63.281	ENSCVAG00000009352	-	88	63.475	Cyprinodon_variegatus
ENSORLG00020014046	-	95	55.870	ENSCVAG00000000686	-	99	55.870	Cyprinodon_variegatus
ENSORLG00020014046	-	76	36.500	ENSDARG00000098398	CABZ01079480.1	81	40.909	Danio_rerio
ENSORLG00020014046	-	99	61.328	ENSELUG00000013643	-	73	52.542	Esox_lucius
ENSORLG00020014046	-	100	53.150	ENSFHEG00000011780	-	97	58.333	Fundulus_heteroclitus
ENSORLG00020014046	-	98	33.459	ENSGMOG00000011217	-	52	33.459	Gadus_morhua
ENSORLG00020014046	-	100	64.453	ENSGAFG00000015867	-	100	63.603	Gambusia_affinis
ENSORLG00020014046	-	90	58.507	ENSHBUG00000013327	-	86	58.507	Haplochromis_burtoni
ENSORLG00020014046	-	100	69.141	ENSHBUG00000015159	-	99	68.151	Haplochromis_burtoni
ENSORLG00020014046	-	100	62.646	ENSHBUG00000015143	-	98	63.014	Haplochromis_burtoni
ENSORLG00020014046	-	99	57.874	ENSIPUG00000019562	-	92	55.193	Ictalurus_punctatus
ENSORLG00020014046	-	99	31.818	ENSIPUG00000001876	-	54	31.818	Ictalurus_punctatus
ENSORLG00020014046	-	99	68.974	ENSKMAG00000010882	-	94	60.542	Kryptolebias_marmoratus
ENSORLG00020014046	-	100	64.453	ENSMAMG00000018192	-	98	62.125	Mastacembelus_armatus
ENSORLG00020014046	-	99	63.780	ENSMAMG00000018261	-	93	62.637	Mastacembelus_armatus
ENSORLG00020014046	-	100	66.929	ENSMZEG00005027852	-	99	58.918	Maylandia_zebra
ENSORLG00020014046	-	100	67.451	ENSMZEG00005002038	-	92	66.324	Maylandia_zebra
ENSORLG00020014046	-	100	62.257	ENSMZEG00005027858	-	100	61.765	Maylandia_zebra
ENSORLG00020014046	-	82	72.152	ENSMMOG00000010419	-	93	57.402	Mola_mola
ENSORLG00020014046	-	99	65.748	ENSMALG00000004165	-	97	64.341	Monopterus_albus
ENSORLG00020014046	-	100	62.162	ENSNBRG00000002998	-	100	61.397	Neolamprologus_brichardi
ENSORLG00020014046	-	100	63.672	ENSNBRG00000003116	-	97	63.356	Neolamprologus_brichardi
ENSORLG00020014046	-	100	68.110	ENSONIG00000000241	-	100	59.046	Oreochromis_niloticus
ENSORLG00020014046	-	100	69.141	ENSORLG00000017404	-	93	63.095	Oryzias_latipes
ENSORLG00020014046	-	100	98.016	ENSORLG00015004157	-	100	98.016	Oryzias_latipes_hsok
ENSORLG00020014046	-	100	68.750	ENSORLG00015004253	-	96	68.350	Oryzias_latipes_hsok
ENSORLG00020014046	-	87	83.735	ENSOMEG00000009483	-	89	72.188	Oryzias_melastigma
ENSORLG00020014046	-	99	77.220	ENSOMEG00000009413	-	100	76.727	Oryzias_melastigma
ENSORLG00020014046	-	99	41.176	ENSPKIG00000004064	-	88	37.888	Paramormyrops_kingsleyae
ENSORLG00020014046	-	99	60.079	ENSPMGG00000011629	-	95	58.672	Periophthalmus_magnuspinnatus
ENSORLG00020014046	-	99	56.911	ENSPLAG00000022742	-	88	60.714	Poecilia_latipinna
ENSORLG00020014046	-	100	66.406	ENSPMEG00000003192	-	100	65.569	Poecilia_mexicana
ENSORLG00020014046	-	100	66.406	ENSPREG00000017145	-	100	64.706	Poecilia_reticulata
ENSORLG00020014046	-	100	67.717	ENSPNYG00000003575	-	100	65.663	Pundamilia_nyererei
ENSORLG00020014046	-	96	63.934	ENSPNYG00000023890	-	94	63.701	Pundamilia_nyererei
ENSORLG00020014046	-	100	57.576	ENSPNYG00000006865	-	74	51.167	Pundamilia_nyererei
ENSORLG00020014046	-	100	68.750	ENSPNYG00000008208	-	99	67.808	Pundamilia_nyererei
ENSORLG00020014046	-	99	53.282	ENSPNAG00000005029	-	99	52.920	Pygocentrus_nattereri
ENSORLG00020014046	-	99	32.959	ENSPNAG00000005968	-	61	31.138	Pygocentrus_nattereri
ENSORLG00020014046	-	99	32.593	ENSPNAG00000006111	-	76	30.130	Pygocentrus_nattereri
ENSORLG00020014046	-	99	58.203	ENSPNAG00000026750	-	91	57.721	Pygocentrus_nattereri
ENSORLG00020014046	-	99	58.039	ENSPNAG00000004111	-	92	57.934	Pygocentrus_nattereri
ENSORLG00020014046	-	99	33.333	ENSSFOG00015019732	-	73	40.000	Scleropages_formosus
ENSORLG00020014046	-	100	66.016	ENSSMAG00000016922	-	81	57.231	Scophthalmus_maximus
ENSORLG00020014046	-	100	66.016	ENSSDUG00000013560	-	80	55.513	Seriola_dumerili
ENSORLG00020014046	-	99	65.354	ENSSLDG00000011620	-	92	64.444	Seriola_lalandi_dorsalis
ENSORLG00020014046	-	98	66.000	ENSSPAG00000014708	-	90	66.316	Stegastes_partitus
ENSORLG00020014046	-	97	53.012	ENSTRUG00000010891	-	98	52.239	Takifugu_rubripes
ENSORLG00020014046	-	100	53.937	ENSTNIG00000018877	-	100	46.443	Tetraodon_nigroviridis
ENSORLG00020014046	-	100	65.625	ENSXCOG00000012535	-	100	64.338	Xiphophorus_couchianus
ENSORLG00020014046	-	100	66.016	ENSXMAG00000015158	-	93	61.012	Xiphophorus_maculatus