EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020014355 (Gene tree)
Gene ID: -
Gene Symbol: frg1
Alias: -
Full Name: FSHD region gene 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 13972 bases
Position: chr1:18947067-18961038
Accession: ZDB-GENE-050417-324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020030083	FRG1	PF06229.12	4.6e-81	1	1
ENSORLP00020013388	FRG1	PF06229.12	6.8e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020020855	-	1782	-	ENSORLP00020030083	255 (aa)	-	-
ENSORLT00020020826	-	2901	-	ENSORLP00020013388	274 (aa)	-	-

Gene Model

Click here to download ENSORLG00020014355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020014355's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020014355	frg1	100	70.155	ENSG00000109536	FRG1	100	80.172	Homo_sapiens
ENSORLG00020014355	frg1	100	84.314	ENSAPOG00000001060	frg1	100	84.314	Acanthochromis_polyacanthus
ENSORLG00020014355	frg1	100	69.767	ENSAMEG00000013503	FRG1	100	69.767	Ailuropoda_melanoleuca
ENSORLG00020014355	frg1	87	85.135	ENSACIG00000022283	frg1	100	85.135	Amphilophus_citrinellus
ENSORLG00020014355	frg1	87	85.202	ENSAOCG00000024240	frg1	87	85.202	Amphiprion_ocellaris
ENSORLG00020014355	frg1	100	84.314	ENSAPEG00000002486	frg1	100	84.314	Amphiprion_percula
ENSORLG00020014355	frg1	100	83.529	ENSATEG00000010414	frg1	100	83.529	Anabas_testudineus
ENSORLG00020014355	frg1	100	70.312	ENSAPLG00000007785	-	100	69.531	Anas_platyrhynchos
ENSORLG00020014355	frg1	100	73.047	ENSACAG00000006877	-	100	73.047	Anolis_carolinensis
ENSORLG00020014355	frg1	100	71.206	ENSANAG00000020876	FRG1	100	70.817	Aotus_nancymaae
ENSORLG00020014355	frg1	100	77.647	ENSACLG00000027065	frg1	100	76.863	Astatotilapia_calliptera
ENSORLG00020014355	frg1	100	81.250	ENSAMXG00000032700	frg1	100	81.250	Astyanax_mexicanus
ENSORLG00020014355	frg1	100	69.767	ENSBTAG00000007089	FRG1	100	69.767	Bos_taurus
ENSORLG00020014355	frg1	85	40.773	WBGene00014177	frg-1	85	40.773	Caenorhabditis_elegans
ENSORLG00020014355	frg1	100	71.206	ENSCJAG00000011272	FRG1	100	70.817	Callithrix_jacchus
ENSORLG00020014355	frg1	100	69.767	ENSCAFG00000007135	FRG1	100	69.767	Canis_familiaris
ENSORLG00020014355	frg1	83	74.057	ENSCAFG00020000082	-	85	74.057	Canis_lupus_dingo
ENSORLG00020014355	frg1	100	69.767	ENSCHIG00000011585	-	100	69.767	Capra_hircus
ENSORLG00020014355	frg1	98	50.000	ENSTSYG00000031599	-	100	50.397	Carlito_syrichta
ENSORLG00020014355	frg1	87	71.749	ENSCAPG00000016056	-	91	71.749	Cavia_aperea
ENSORLG00020014355	frg1	100	70.039	ENSCPOG00000022277	-	100	69.650	Cavia_porcellus
ENSORLG00020014355	frg1	100	71.206	ENSCCAG00000024627	FRG1	100	70.817	Cebus_capucinus
ENSORLG00020014355	frg1	100	69.767	ENSCATG00000029230	FRG1	100	69.767	Cercocebus_atys
ENSORLG00020014355	frg1	100	51.373	ENSCLAG00000006068	-	100	50.980	Chinchilla_lanigera
ENSORLG00020014355	frg1	100	70.039	ENSCLAG00000000370	-	100	70.039	Chinchilla_lanigera
ENSORLG00020014355	frg1	100	57.752	ENSCLAG00000004960	-	100	58.527	Chinchilla_lanigera
ENSORLG00020014355	frg1	99	49.012	ENSCLAG00000009263	-	100	49.012	Chinchilla_lanigera
ENSORLG00020014355	frg1	83	71.226	ENSCSAG00000017729	-	98	71.226	Chlorocebus_sabaeus
ENSORLG00020014355	frg1	100	69.767	ENSCSAG00000002899	FRG1	100	69.767	Chlorocebus_sabaeus
ENSORLG00020014355	frg1	86	73.636	ENSCPBG00000009211	-	86	73.636	Chrysemys_picta_bellii
ENSORLG00020014355	frg1	99	48.315	ENSCING00000005161	-	99	49.438	Ciona_intestinalis
ENSORLG00020014355	frg1	68	46.995	ENSCSAVG00000008018	-	100	47.541	Ciona_savignyi
ENSORLG00020014355	frg1	100	69.767	ENSCANG00000020991	FRG1	100	69.767	Colobus_angolensis_palliatus
ENSORLG00020014355	frg1	100	70.155	ENSCGRG00001014998	Frg1	100	70.155	Cricetulus_griseus_chok1gshd
ENSORLG00020014355	frg1	100	55.642	ENSCGRG00000003902	-	96	56.420	Cricetulus_griseus_crigri
ENSORLG00020014355	frg1	100	70.155	ENSCGRG00000011860	-	100	70.155	Cricetulus_griseus_crigri
ENSORLG00020014355	frg1	96	78.279	ENSCSEG00000015950	frg1	100	78.279	Cynoglossus_semilaevis
ENSORLG00020014355	frg1	100	83.137	ENSCVAG00000009985	frg1	100	83.137	Cyprinodon_variegatus
ENSORLG00020014355	frg1	100	83.529	ENSDARG00000056504	frg1	100	85.915	Danio_rerio
ENSORLG00020014355	frg1	100	68.992	ENSDNOG00000014886	FRG1	100	68.992	Dasypus_novemcinctus
ENSORLG00020014355	frg1	100	62.403	ENSDORG00000016190	Frg1	100	62.403	Dipodomys_ordii
ENSORLG00020014355	frg1	100	47.529	FBgn0036964	FRG1	100	47.529	Drosophila_melanogaster
ENSORLG00020014355	frg1	100	68.605	ENSETEG00000012349	-	100	68.605	Echinops_telfairi
ENSORLG00020014355	frg1	100	69.261	ENSEASG00005017497	FRG1	100	70.039	Equus_asinus_asinus
ENSORLG00020014355	frg1	100	69.261	ENSECAG00000003122	FRG1	100	70.039	Equus_caballus
ENSORLG00020014355	frg1	62	73.885	ENSEEUG00000000145	-	100	73.885	Erinaceus_europaeus
ENSORLG00020014355	frg1	100	80.392	ENSELUG00000021712	frg1	100	80.392	Esox_lucius
ENSORLG00020014355	frg1	100	69.767	ENSFCAG00000025737	FRG1	100	69.767	Felis_catus
ENSORLG00020014355	frg1	87	71.171	ENSFALG00000011231	-	87	71.171	Ficedula_albicollis
ENSORLG00020014355	frg1	100	59.615	ENSFDAG00000012697	-	98	65.888	Fukomys_damarensis
ENSORLG00020014355	frg1	100	70.428	ENSFDAG00000000962	-	100	70.428	Fukomys_damarensis
ENSORLG00020014355	frg1	100	83.137	ENSFHEG00000010540	frg1	100	83.137	Fundulus_heteroclitus
ENSORLG00020014355	frg1	100	80.392	ENSGMOG00000000867	frg1	100	80.392	Gadus_morhua
ENSORLG00020014355	frg1	100	70.312	ENSGALG00000013590	-	100	70.703	Gallus_gallus
ENSORLG00020014355	frg1	81	78.744	ENSGAFG00000013855	frg1	100	78.744	Gambusia_affinis
ENSORLG00020014355	frg1	100	82.812	ENSGACG00000016888	frg1	100	82.812	Gasterosteus_aculeatus
ENSORLG00020014355	frg1	100	71.484	ENSGAGG00000025012	-	100	71.484	Gopherus_agassizii
ENSORLG00020014355	frg1	67	69.591	ENSGGOG00000012888	-	86	69.591	Gorilla_gorilla
ENSORLG00020014355	frg1	100	43.726	ENSGGOG00000040796	-	100	43.726	Gorilla_gorilla
ENSORLG00020014355	frg1	100	83.529	ENSHBUG00000010667	frg1	100	83.529	Haplochromis_burtoni
ENSORLG00020014355	frg1	99	67.578	ENSHGLG00000020402	-	94	67.188	Heterocephalus_glaber_female
ENSORLG00020014355	frg1	99	66.016	ENSHGLG00000020943	-	99	65.625	Heterocephalus_glaber_female
ENSORLG00020014355	frg1	100	59.375	ENSHGLG00000001211	-	100	59.690	Heterocephalus_glaber_female
ENSORLG00020014355	frg1	100	70.428	ENSHGLG00000005601	FRG1	100	70.039	Heterocephalus_glaber_female
ENSORLG00020014355	frg1	99	66.016	ENSHGLG00100021211	-	99	65.625	Heterocephalus_glaber_male
ENSORLG00020014355	frg1	100	57.812	ENSHGLG00100015285	-	100	56.641	Heterocephalus_glaber_male
ENSORLG00020014355	frg1	100	59.766	ENSHGLG00100010674	-	100	60.078	Heterocephalus_glaber_male
ENSORLG00020014355	frg1	100	70.817	ENSHGLG00100016261	-	100	70.428	Heterocephalus_glaber_male
ENSORLG00020014355	frg1	88	84.000	ENSHCOG00000000224	frg1	96	84.000	Hippocampus_comes
ENSORLG00020014355	frg1	100	79.377	ENSIPUG00000022716	frg1	100	77.821	Ictalurus_punctatus
ENSORLG00020014355	frg1	100	70.930	ENSSTOG00000002857	-	100	70.930	Ictidomys_tridecemlineatus
ENSORLG00020014355	frg1	100	69.767	ENSJJAG00000020625	Frg1	100	69.767	Jaculus_jaculus
ENSORLG00020014355	frg1	100	81.961	ENSKMAG00000005841	frg1	100	81.961	Kryptolebias_marmoratus
ENSORLG00020014355	frg1	100	83.529	ENSLBEG00000001466	frg1	100	83.529	Labrus_bergylta
ENSORLG00020014355	frg1	100	62.069	ENSLACG00000010243	frg1	100	62.069	Latimeria_chalumnae
ENSORLG00020014355	frg1	100	75.686	ENSLOCG00000013868	frg1	100	75.686	Lepisosteus_oculatus
ENSORLG00020014355	frg1	100	68.992	ENSLAFG00000011191	FRG1	100	68.992	Loxodonta_africana
ENSORLG00020014355	frg1	83	64.486	ENSMFAG00000042873	-	89	64.486	Macaca_fascicularis
ENSORLG00020014355	frg1	100	69.767	ENSMFAG00000031178	FRG1	100	69.767	Macaca_fascicularis
ENSORLG00020014355	frg1	78	64.532	ENSMMUG00000047496	-	87	64.532	Macaca_mulatta
ENSORLG00020014355	frg1	100	69.767	ENSMMUG00000001824	FRG1	100	69.767	Macaca_mulatta
ENSORLG00020014355	frg1	96	64.777	ENSMNEG00000018620	FRG1	100	64.777	Macaca_nemestrina
ENSORLG00020014355	frg1	100	69.767	ENSMLEG00000028881	FRG1	100	69.767	Mandrillus_leucophaeus
ENSORLG00020014355	frg1	100	84.314	ENSMAMG00000012406	frg1	100	84.314	Mastacembelus_armatus
ENSORLG00020014355	frg1	100	83.137	ENSMZEG00005007549	frg1	100	83.137	Maylandia_zebra
ENSORLG00020014355	frg1	100	70.312	ENSMGAG00000011481	-	100	70.703	Meleagris_gallopavo
ENSORLG00020014355	frg1	100	69.767	ENSMAUG00000000847	Frg1	100	69.767	Mesocricetus_auratus
ENSORLG00020014355	frg1	100	69.767	ENSMICG00000046816	FRG1	100	69.767	Microcebus_murinus
ENSORLG00020014355	frg1	100	63.035	ENSMOCG00000023000	Frg1	100	63.035	Microtus_ochrogaster
ENSORLG00020014355	frg1	88	81.250	ENSMMOG00000004008	frg1	95	81.250	Mola_mola
ENSORLG00020014355	frg1	100	69.767	ENSMODG00000019031	-	87	70.155	Monodelphis_domestica
ENSORLG00020014355	frg1	100	83.922	ENSMALG00000018497	frg1	100	83.922	Monopterus_albus
ENSORLG00020014355	frg1	100	69.380	MGP_CAROLIEiJ_G0031006	Frg1	100	69.380	Mus_caroli
ENSORLG00020014355	frg1	100	69.380	ENSMUSG00000031590	Frg1	100	69.380	Mus_musculus
ENSORLG00020014355	frg1	100	69.767	MGP_PahariEiJ_G0021475	Frg1	100	69.767	Mus_pahari
ENSORLG00020014355	frg1	100	68.992	MGP_SPRETEiJ_G0032120	Frg1	100	68.992	Mus_spretus
ENSORLG00020014355	frg1	100	69.767	ENSMPUG00000017962	FRG1	100	69.767	Mustela_putorius_furo
ENSORLG00020014355	frg1	100	70.039	ENSMLUG00000023179	FRG1	100	70.039	Myotis_lucifugus
ENSORLG00020014355	frg1	100	69.380	ENSNGAG00000016411	Frg1	100	69.380	Nannospalax_galili
ENSORLG00020014355	frg1	81	75.362	ENSNBRG00000006806	frg1	95	75.362	Neolamprologus_brichardi
ENSORLG00020014355	frg1	78	64.677	ENSNLEG00000028874	-	91	64.677	Nomascus_leucogenys
ENSORLG00020014355	frg1	100	59.690	ENSNLEG00000032333	-	100	59.690	Nomascus_leucogenys
ENSORLG00020014355	frg1	100	62.452	ENSNLEG00000035849	-	100	62.069	Nomascus_leucogenys
ENSORLG00020014355	frg1	100	49.609	ENSNLEG00000032846	-	100	62.500	Nomascus_leucogenys
ENSORLG00020014355	frg1	100	68.872	ENSNLEG00000000930	FRG1	100	70.428	Nomascus_leucogenys
ENSORLG00020014355	frg1	78	65.672	ENSNLEG00000036059	-	86	65.672	Nomascus_leucogenys
ENSORLG00020014355	frg1	60	71.053	ENSMEUG00000007509	-	59	71.053	Notamacropus_eugenii
ENSORLG00020014355	frg1	100	59.690	ENSOPRG00000004722	-	100	59.690	Ochotona_princeps
ENSORLG00020014355	frg1	100	70.039	ENSODEG00000006458	-	100	70.039	Octodon_degus
ENSORLG00020014355	frg1	100	53.906	ENSODEG00000006953	-	91	60.287	Octodon_degus
ENSORLG00020014355	frg1	100	83.984	ENSONIG00000010162	frg1	100	83.984	Oreochromis_niloticus
ENSORLG00020014355	frg1	76	67.526	ENSOANG00000005659	-	86	67.526	Ornithorhynchus_anatinus
ENSORLG00020014355	frg1	100	68.992	ENSOCUG00000009038	-	100	68.992	Oryctolagus_cuniculus
ENSORLG00020014355	frg1	100	99.270	ENSORLG00000008106	frg1	100	99.270	Oryzias_latipes
ENSORLG00020014355	frg1	100	99.216	ENSORLG00015014159	frg1	100	99.216	Oryzias_latipes_hsok
ENSORLG00020014355	frg1	85	92.130	ENSOMEG00000002468	frg1	89	92.130	Oryzias_melastigma
ENSORLG00020014355	frg1	100	69.380	ENSOGAG00000005749	-	100	69.380	Otolemur_garnettii
ENSORLG00020014355	frg1	100	68.199	ENSOARG00000008592	FRG1	100	68.199	Ovis_aries
ENSORLG00020014355	frg1	84	70.370	ENSPPAG00000043170	-	100	70.370	Pan_paniscus
ENSORLG00020014355	frg1	96	50.775	ENSPPAG00000043174	-	100	51.181	Pan_paniscus
ENSORLG00020014355	frg1	100	69.380	ENSPPRG00000025003	-	100	69.380	Panthera_pardus
ENSORLG00020014355	frg1	100	68.482	ENSPPRG00000019777	-	100	68.093	Panthera_pardus
ENSORLG00020014355	frg1	100	68.872	ENSPTIG00000006566	-	100	68.482	Panthera_tigris_altaica
ENSORLG00020014355	frg1	100	69.380	ENSPTIG00000006588	-	100	69.380	Panthera_tigris_altaica
ENSORLG00020014355	frg1	95	58.197	ENSPTRG00000052363	-	95	63.725	Pan_troglodytes
ENSORLG00020014355	frg1	100	70.155	ENSPTRG00000016671	-	100	70.155	Pan_troglodytes
ENSORLG00020014355	frg1	96	57.895	ENSPTRG00000044710	-	100	57.895	Pan_troglodytes
ENSORLG00020014355	frg1	88	60.606	ENSPTRG00000043123	-	94	60.173	Pan_troglodytes
ENSORLG00020014355	frg1	96	57.085	ENSPTRG00000050204	-	100	57.085	Pan_troglodytes
ENSORLG00020014355	frg1	100	70.155	ENSPTRG00000050205	-	100	70.155	Pan_troglodytes
ENSORLG00020014355	frg1	69	66.111	ENSPANG00000031530	-	84	66.111	Papio_anubis
ENSORLG00020014355	frg1	100	73.047	ENSPKIG00000024189	frg1	100	73.047	Paramormyrops_kingsleyae
ENSORLG00020014355	frg1	84	74.884	ENSPSIG00000017971	-	82	74.884	Pelodiscus_sinensis
ENSORLG00020014355	frg1	98	75.794	ENSPMGG00000019273	frg1	100	75.502	Periophthalmus_magnuspinnatus
ENSORLG00020014355	frg1	100	69.767	ENSPEMG00000000650	Frg1	100	69.767	Peromyscus_maniculatus_bairdii
ENSORLG00020014355	frg1	100	69.380	ENSPCIG00000007530	-	69	69.380	Phascolarctos_cinereus
ENSORLG00020014355	frg1	100	82.745	ENSPFOG00000006721	frg1	100	82.745	Poecilia_formosa
ENSORLG00020014355	frg1	100	82.745	ENSPMEG00000013816	frg1	100	82.745	Poecilia_mexicana
ENSORLG00020014355	frg1	100	82.745	ENSPREG00000000097	frg1	100	82.745	Poecilia_reticulata
ENSORLG00020014355	frg1	62	68.987	ENSPPYG00000011275	-	87	68.987	Pongo_abelii
ENSORLG00020014355	frg1	56	75.862	ENSPPYG00000029810	-	100	75.862	Pongo_abelii
ENSORLG00020014355	frg1	95	66.667	ENSPCAG00000014953	-	100	66.667	Procavia_capensis
ENSORLG00020014355	frg1	79	56.863	ENSPCOG00000022726	FRG1	95	56.863	Propithecus_coquereli
ENSORLG00020014355	frg1	100	56.977	ENSPVAG00000010551	FRG1	100	56.977	Pteropus_vampyrus
ENSORLG00020014355	frg1	68	83.815	ENSPNYG00000015209	frg1	75	83.815	Pundamilia_nyererei
ENSORLG00020014355	frg1	100	76.357	ENSPNAG00000013259	frg1	100	75.290	Pygocentrus_nattereri
ENSORLG00020014355	frg1	100	69.380	ENSRNOG00000009846	Frg1	100	69.380	Rattus_norvegicus
ENSORLG00020014355	frg1	89	68.122	ENSRBIG00000042219	-	96	68.122	Rhinopithecus_bieti
ENSORLG00020014355	frg1	82	67.773	ENSRROG00000032084	-	88	67.773	Rhinopithecus_roxellana
ENSORLG00020014355	frg1	100	67.829	ENSRROG00000015523	FRG1	100	67.829	Rhinopithecus_roxellana
ENSORLG00020014355	frg1	100	71.595	ENSSBOG00000034175	FRG1	100	71.206	Saimiri_boliviensis_boliviensis
ENSORLG00020014355	frg1	100	68.605	ENSSHAG00000005886	-	100	68.605	Sarcophilus_harrisii
ENSORLG00020014355	frg1	97	77.016	ENSSFOG00015021361	frg1	99	77.016	Scleropages_formosus
ENSORLG00020014355	frg1	100	82.745	ENSSMAG00000001213	frg1	100	82.745	Scophthalmus_maximus
ENSORLG00020014355	frg1	100	83.529	ENSSDUG00000018886	frg1	100	83.529	Seriola_dumerili
ENSORLG00020014355	frg1	100	83.529	ENSSLDG00000024191	frg1	100	83.529	Seriola_lalandi_dorsalis
ENSORLG00020014355	frg1	65	73.810	ENSSARG00000002471	-	93	71.839	Sorex_araneus
ENSORLG00020014355	frg1	100	69.412	ENSSPUG00000017326	-	96	72.115	Sphenodon_punctatus
ENSORLG00020014355	frg1	100	77.255	ENSSPAG00000013294	frg1	100	77.255	Stegastes_partitus
ENSORLG00020014355	frg1	100	70.155	ENSSSCG00000006996	FRG1	100	70.155	Sus_scrofa
ENSORLG00020014355	frg1	100	70.703	ENSTGUG00000007028	-	100	70.312	Taeniopygia_guttata
ENSORLG00020014355	frg1	100	80.392	ENSTRUG00000016208	frg1	100	80.392	Takifugu_rubripes
ENSORLG00020014355	frg1	100	82.353	ENSTNIG00000007128	frg1	100	82.353	Tetraodon_nigroviridis
ENSORLG00020014355	frg1	78	47.980	ENSTBEG00000017605	-	99	47.980	Tupaia_belangeri
ENSORLG00020014355	frg1	100	68.605	ENSTBEG00000014491	-	100	68.605	Tupaia_belangeri
ENSORLG00020014355	frg1	83	52.133	ENSTBEG00000012789	-	99	52.133	Tupaia_belangeri
ENSORLG00020014355	frg1	100	69.380	ENSTTRG00000003429	FRG1	100	69.380	Tursiops_truncatus
ENSORLG00020014355	frg1	96	67.073	ENSUAMG00000012123	-	100	66.122	Ursus_americanus
ENSORLG00020014355	frg1	100	69.767	ENSUMAG00000021119	FRG1	100	69.767	Ursus_maritimus
ENSORLG00020014355	frg1	100	67.442	ENSVPAG00000000616	FRG1	100	67.442	Vicugna_pacos
ENSORLG00020014355	frg1	87	71.749	ENSVPAG00000011977	-	94	71.749	Vicugna_pacos
ENSORLG00020014355	frg1	83	74.057	ENSVVUG00000007181	-	77	74.057	Vulpes_vulpes
ENSORLG00020014355	frg1	100	71.875	ENSXETG00000012470	frg1	100	71.875	Xenopus_tropicalis
ENSORLG00020014355	frg1	100	77.255	ENSXCOG00000005312	frg1	100	77.255	Xiphophorus_couchianus
ENSORLG00020014355	frg1	100	81.569	ENSXMAG00000007751	frg1	100	81.569	Xiphophorus_maculatus