EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020014452 (Gene tree)
Gene ID: -
Gene Symbol: pum2
Alias: -
Full Name: pumilio RNA-binding family member 2
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 19427 bases
Position: chr24:5670998-5690424
Accession: ZDB-GENE-081031-76
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020013196	PUF	PF00806.19	3.6e-71	1	7
ENSORLP00020013196	PUF	PF00806.19	3.6e-71	2	7
ENSORLP00020013196	PUF	PF00806.19	3.6e-71	3	7
ENSORLP00020013196	PUF	PF00806.19	3.6e-71	4	7
ENSORLP00020013196	PUF	PF00806.19	3.6e-71	5	7
ENSORLP00020013196	PUF	PF00806.19	3.6e-71	6	7
ENSORLP00020013196	PUF	PF00806.19	3.6e-71	7	7
ENSORLP00020030029	PUF	PF00806.19	1.5e-69	1	7
ENSORLP00020030029	PUF	PF00806.19	1.5e-69	2	7
ENSORLP00020030029	PUF	PF00806.19	1.5e-69	3	7
ENSORLP00020030029	PUF	PF00806.19	1.5e-69	4	7
ENSORLP00020030029	PUF	PF00806.19	1.5e-69	5	7
ENSORLP00020030029	PUF	PF00806.19	1.5e-69	6	7
ENSORLP00020030029	PUF	PF00806.19	1.5e-69	7	7
ENSORLP00020013243	PUF	PF00806.19	1.6e-67	1	7
ENSORLP00020013243	PUF	PF00806.19	1.6e-67	2	7
ENSORLP00020013243	PUF	PF00806.19	1.6e-67	3	7
ENSORLP00020013243	PUF	PF00806.19	1.6e-67	4	7
ENSORLP00020013243	PUF	PF00806.19	1.6e-67	5	7
ENSORLP00020013243	PUF	PF00806.19	1.6e-67	6	7
ENSORLP00020013243	PUF	PF00806.19	1.6e-67	7	7
ENSORLP00020030010	PUF	PF00806.19	1.6e-67	1	7
ENSORLP00020030010	PUF	PF00806.19	1.6e-67	2	7
ENSORLP00020030010	PUF	PF00806.19	1.6e-67	3	7
ENSORLP00020030010	PUF	PF00806.19	1.6e-67	4	7
ENSORLP00020030010	PUF	PF00806.19	1.6e-67	5	7
ENSORLP00020030010	PUF	PF00806.19	1.6e-67	6	7
ENSORLP00020030010	PUF	PF00806.19	1.6e-67	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020020708	-	6051	-	ENSORLP00020030029	1175 (aa)	-	-
ENSORLT00020020599	-	2931	-	ENSORLP00020013196	976 (aa)	-	-
ENSORLT00020032551	-	6024	-	ENSORLP00020013243	1199 (aa)	-	-
ENSORLT00020020748	-	7092	-	ENSORLP00020030010	1199 (aa)	-	-

Gene Model

Click here to download ENSORLG00020014452's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020014452's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020014452	pum2	89	83.373	ENSORLG00020019461	pum1	82	83.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020014452	pum2	94	75.661	ENSG00000055917	PUM2	91	90.931	Homo_sapiens
ENSORLG00020014452	pum2	100	91.574	ENSAPOG00000015756	pum2	100	91.675	Acanthochromis_polyacanthus
ENSORLG00020014452	pum2	99	81.590	ENSAMEG00000002823	PUM2	96	90.488	Ailuropoda_melanoleuca
ENSORLG00020014452	pum2	90	97.479	ENSACIG00000010646	pum2	96	97.479	Amphilophus_citrinellus
ENSORLG00020014452	pum2	99	90.917	ENSAOCG00000016619	pum2	99	91.308	Amphiprion_ocellaris
ENSORLG00020014452	pum2	100	93.219	ENSAPEG00000019924	pum2	100	93.016	Amphiprion_percula
ENSORLG00020014452	pum2	100	92.244	ENSATEG00000015030	pum2	100	91.832	Anabas_testudineus
ENSORLG00020014452	pum2	100	81.723	ENSAPLG00000010496	PUM2	90	90.686	Anas_platyrhynchos
ENSORLG00020014452	pum2	100	81.303	ENSACAG00000010491	PUM2	91	90.196	Anolis_carolinensis
ENSORLG00020014452	pum2	100	81.933	ENSANAG00000021807	PUM2	91	90.931	Aotus_nancymaae
ENSORLG00020014452	pum2	100	92.339	ENSACLG00000022532	pum2	100	91.845	Astatotilapia_calliptera
ENSORLG00020014452	pum2	100	75.150	ENSBTAG00000011155	PUM2	100	78.638	Bos_taurus
ENSORLG00020014452	pum2	100	81.933	ENSCJAG00000007450	PUM2	91	90.931	Callithrix_jacchus
ENSORLG00020014452	pum2	90	74.376	ENSCAFG00000003839	PUM2	100	73.173	Canis_familiaris
ENSORLG00020014452	pum2	99	81.590	ENSCAFG00020025689	PUM2	92	90.488	Canis_lupus_dingo
ENSORLG00020014452	pum2	100	75.428	ENSCHIG00000022180	PUM2	100	73.817	Capra_hircus
ENSORLG00020014452	pum2	99	74.949	ENSTSYG00000014463	PUM2	100	73.383	Carlito_syrichta
ENSORLG00020014452	pum2	90	86.948	ENSCAPG00000016888	PUM2	99	84.567	Cavia_aperea
ENSORLG00020014452	pum2	100	75.349	ENSCPOG00000031996	PUM2	91	90.931	Cavia_porcellus
ENSORLG00020014452	pum2	94	75.873	ENSCCAG00000037035	PUM2	100	73.729	Cebus_capucinus
ENSORLG00020014452	pum2	100	81.933	ENSCATG00000043826	PUM2	91	90.931	Cercocebus_atys
ENSORLG00020014452	pum2	100	75.150	ENSCLAG00000006048	PUM2	91	90.931	Chinchilla_lanigera
ENSORLG00020014452	pum2	100	81.933	ENSCSAG00000008087	PUM2	91	90.931	Chlorocebus_sabaeus
ENSORLG00020014452	pum2	72	79.268	ENSCHOG00000004575	PUM2	75	79.268	Choloepus_hoffmanni
ENSORLG00020014452	pum2	100	74.100	ENSCPBG00000019966	PUM2	100	73.400	Chrysemys_picta_bellii
ENSORLG00020014452	pum2	100	81.933	ENSCANG00000032797	PUM2	91	90.931	Colobus_angolensis_palliatus
ENSORLG00020014452	pum2	100	75.225	ENSCGRG00001025023	Pum2	91	90.931	Cricetulus_griseus_chok1gshd
ENSORLG00020014452	pum2	100	75.225	ENSCGRG00000001580	Pum2	91	90.931	Cricetulus_griseus_crigri
ENSORLG00020014452	pum2	100	89.604	ENSCSEG00000020899	pum2	100	89.851	Cynoglossus_semilaevis
ENSORLG00020014452	pum2	100	91.344	ENSCVAG00000002426	pum2	100	90.684	Cyprinodon_variegatus
ENSORLG00020014452	pum2	100	85.726	ENSDARG00000061040	pum2	100	85.306	Danio_rerio
ENSORLG00020014452	pum2	97	76.101	ENSDNOG00000006733	PUM2	95	84.108	Dasypus_novemcinctus
ENSORLG00020014452	pum2	97	80.962	ENSDORG00000011453	Pum2	90	90.000	Dipodomys_ordii
ENSORLG00020014452	pum2	86	90.036	ENSETEG00000017683	PUM2	79	90.747	Echinops_telfairi
ENSORLG00020014452	pum2	68	68.398	ENSEBUG00000014828	pum2	92	56.737	Eptatretus_burgeri
ENSORLG00020014452	pum2	95	53.498	ENSEBUG00000004435	pum2	86	83.171	Eptatretus_burgeri
ENSORLG00020014452	pum2	99	81.933	ENSEASG00005009429	PUM2	96	90.931	Equus_asinus_asinus
ENSORLG00020014452	pum2	99	81.933	ENSECAG00000021930	PUM2	96	90.931	Equus_caballus
ENSORLG00020014452	pum2	75	69.811	ENSEEUG00000003224	-	74	69.811	Erinaceus_europaeus
ENSORLG00020014452	pum2	100	87.449	ENSELUG00000014997	pum2	100	87.049	Esox_lucius
ENSORLG00020014452	pum2	99	81.723	ENSFCAG00000027520	PUM2	96	90.686	Felis_catus
ENSORLG00020014452	pum2	100	81.933	ENSFALG00000001759	PUM2	96	90.931	Ficedula_albicollis
ENSORLG00020014452	pum2	100	74.825	ENSFDAG00000019685	PUM2	91	90.441	Fukomys_damarensis
ENSORLG00020014452	pum2	100	92.792	ENSFHEG00000021596	pum2	100	92.081	Fundulus_heteroclitus
ENSORLG00020014452	pum2	90	85.529	ENSGMOG00000006903	pum2	100	84.323	Gadus_morhua
ENSORLG00020014452	pum2	99	73.327	ENSGALG00000016481	PUM2	100	72.921	Gallus_gallus
ENSORLG00020014452	pum2	100	92.292	ENSGAFG00000013691	pum2	100	91.988	Gambusia_affinis
ENSORLG00020014452	pum2	90	89.459	ENSGACG00000009670	pum2	91	97.561	Gasterosteus_aculeatus
ENSORLG00020014452	pum2	100	71.464	ENSGAGG00000020698	PUM2	100	73.407	Gopherus_agassizii
ENSORLG00020014452	pum2	94	75.767	ENSGGOG00000011374	PUM2	100	73.623	Gorilla_gorilla
ENSORLG00020014452	pum2	100	85.450	ENSHBUG00000016453	pum2	100	85.606	Haplochromis_burtoni
ENSORLG00020014452	pum2	100	74.100	ENSHGLG00000007892	PUM2	100	72.576	Heterocephalus_glaber_female
ENSORLG00020014452	pum2	100	67.407	ENSHGLG00100015510	PUM2	91	89.512	Heterocephalus_glaber_male
ENSORLG00020014452	pum2	100	90.067	ENSHCOG00000010119	pum2	100	90.067	Hippocampus_comes
ENSORLG00020014452	pum2	100	75.300	ENSSTOG00000006262	PUM2	100	73.684	Ictidomys_tridecemlineatus
ENSORLG00020014452	pum2	100	81.590	ENSJJAG00000020969	Pum2	91	90.488	Jaculus_jaculus
ENSORLG00020014452	pum2	100	90.677	ENSKMAG00000017216	pum2	100	90.594	Kryptolebias_marmoratus
ENSORLG00020014452	pum2	99	97.805	ENSLBEG00000020488	pum2	100	90.594	Labrus_bergylta
ENSORLG00020014452	pum2	100	73.197	ENSLACG00000008723	PUM2	100	72.727	Latimeria_chalumnae
ENSORLG00020014452	pum2	100	75.349	ENSLOCG00000017196	pum2	100	74.979	Lepisosteus_oculatus
ENSORLG00020014452	pum2	100	81.172	ENSLAFG00000009278	PUM2	91	90.244	Loxodonta_africana
ENSORLG00020014452	pum2	100	81.933	ENSMFAG00000000492	PUM2	91	90.931	Macaca_fascicularis
ENSORLG00020014452	pum2	100	81.933	ENSMMUG00000023181	PUM2	91	90.931	Macaca_mulatta
ENSORLG00020014452	pum2	100	81.933	ENSMNEG00000039659	PUM2	91	90.931	Macaca_nemestrina
ENSORLG00020014452	pum2	100	81.933	ENSMLEG00000039243	PUM2	91	90.931	Mandrillus_leucophaeus
ENSORLG00020014452	pum2	100	91.509	ENSMAMG00000006121	pum2	100	90.602	Mastacembelus_armatus
ENSORLG00020014452	pum2	100	92.339	ENSMZEG00005000791	pum2	100	91.845	Maylandia_zebra
ENSORLG00020014452	pum2	100	68.123	ENSMGAG00000014040	PUM2	100	73.028	Meleagris_gallopavo
ENSORLG00020014452	pum2	100	68.519	ENSMAUG00000000311	Pum2	91	90.488	Mesocricetus_auratus
ENSORLG00020014452	pum2	94	75.687	ENSMICG00000011647	PUM2	90	90.488	Microcebus_murinus
ENSORLG00020014452	pum2	100	68.646	ENSMOCG00000013663	Pum2	100	73.475	Microtus_ochrogaster
ENSORLG00020014452	pum2	90	90.242	ENSMMOG00000002975	pum2	100	90.613	Mola_mola
ENSORLG00020014452	pum2	90	72.978	ENSMODG00000009811	PUM2	100	71.507	Monodelphis_domestica
ENSORLG00020014452	pum2	100	89.463	ENSMALG00000022313	pum2	100	88.450	Monopterus_albus
ENSORLG00020014452	pum2	100	81.933	MGP_CAROLIEiJ_G0017603	Pum2	91	90.931	Mus_caroli
ENSORLG00020014452	pum2	100	81.723	ENSMUSG00000020594	Pum2	91	90.686	Mus_musculus
ENSORLG00020014452	pum2	100	75.827	MGP_PahariEiJ_G0029361	Pum2	91	90.931	Mus_pahari
ENSORLG00020014452	pum2	100	81.723	MGP_SPRETEiJ_G0018447	Pum2	91	90.686	Mus_spretus
ENSORLG00020014452	pum2	90	74.468	ENSMPUG00000013734	PUM2	100	73.265	Mustela_putorius_furo
ENSORLG00020014452	pum2	99	81.723	ENSMLUG00000007362	PUM2	96	90.686	Myotis_lucifugus
ENSORLG00020014452	pum2	90	75.116	ENSNGAG00000016665	-	100	73.636	Nannospalax_galili
ENSORLG00020014452	pum2	90	52.995	ENSNGAG00000016239	-	99	51.017	Nannospalax_galili
ENSORLG00020014452	pum2	100	82.692	ENSNBRG00000020737	pum2	100	81.000	Neolamprologus_brichardi
ENSORLG00020014452	pum2	94	75.767	ENSNLEG00000002509	PUM2	91	90.931	Nomascus_leucogenys
ENSORLG00020014452	pum2	87	82.500	ENSMEUG00000016567	PUM2	96	77.805	Notamacropus_eugenii
ENSORLG00020014452	pum2	74	61.806	ENSOPRG00000001963	PUM2	93	60.401	Ochotona_princeps
ENSORLG00020014452	pum2	100	74.925	ENSODEG00000007823	PUM2	91	90.732	Octodon_degus
ENSORLG00020014452	pum2	100	92.521	ENSONIG00000006119	pum2	100	92.017	Oreochromis_niloticus
ENSORLG00020014452	pum2	90	74.194	ENSOCUG00000017908	PUM2	100	73.088	Oryctolagus_cuniculus
ENSORLG00020014452	pum2	100	99.385	ENSORLG00000012611	pum2	100	99.385	Oryzias_latipes
ENSORLG00020014452	pum2	100	99.249	ENSORLG00015009427	pum2	100	99.249	Oryzias_latipes_hsok
ENSORLG00020014452	pum2	94	95.284	ENSOMEG00000005889	pum2	100	95.284	Oryzias_melastigma
ENSORLG00020014452	pum2	98	75.287	ENSOGAG00000002187	PUM2	100	72.993	Otolemur_garnettii
ENSORLG00020014452	pum2	90	74.238	ENSOARG00000017236	PUM2	100	73.038	Ovis_aries
ENSORLG00020014452	pum2	94	75.767	ENSPPAG00000023095	PUM2	100	73.623	Pan_paniscus
ENSORLG00020014452	pum2	99	81.723	ENSPPRG00000021443	PUM2	96	90.686	Panthera_pardus
ENSORLG00020014452	pum2	99	81.723	ENSPTIG00000018982	PUM2	96	90.686	Panthera_tigris_altaica
ENSORLG00020014452	pum2	94	75.767	ENSPTRG00000011692	PUM2	100	73.623	Pan_troglodytes
ENSORLG00020014452	pum2	94	64.118	ENSPANG00000009393	PUM2	100	85.915	Papio_anubis
ENSORLG00020014452	pum2	100	68.700	ENSPKIG00000023195	pum2	100	72.864	Paramormyrops_kingsleyae
ENSORLG00020014452	pum2	100	71.957	ENSPSIG00000011626	PUM2	99	71.711	Pelodiscus_sinensis
ENSORLG00020014452	pum2	100	89.624	ENSPMGG00000016123	pum2	100	89.013	Periophthalmus_magnuspinnatus
ENSORLG00020014452	pum2	100	68.582	ENSPEMG00000008357	Pum2	100	73.500	Peromyscus_maniculatus_bairdii
ENSORLG00020014452	pum2	100	56.354	ENSPMAG00000007038	pum2	90	82.850	Petromyzon_marinus
ENSORLG00020014452	pum2	100	92.409	ENSPFOG00000019208	pum2	100	92.162	Poecilia_formosa
ENSORLG00020014452	pum2	100	92.698	ENSPLAG00000001826	pum2	100	92.394	Poecilia_latipinna
ENSORLG00020014452	pum2	100	92.409	ENSPMEG00000015766	pum2	100	92.670	Poecilia_mexicana
ENSORLG00020014452	pum2	100	92.401	ENSPREG00000006905	pum2	100	92.097	Poecilia_reticulata
ENSORLG00020014452	pum2	90	74.908	ENSPPYG00000012617	PUM2	100	73.801	Pongo_abelii
ENSORLG00020014452	pum2	76	88.889	ENSPCAG00000008001	PUM2	70	88.889	Procavia_capensis
ENSORLG00020014452	pum2	99	75.380	ENSPCOG00000019636	PUM2	100	73.645	Propithecus_coquereli
ENSORLG00020014452	pum2	98	70.921	ENSPVAG00000002920	PUM2	95	78.049	Pteropus_vampyrus
ENSORLG00020014452	pum2	100	92.257	ENSPNYG00000022901	pum2	100	91.763	Pundamilia_nyererei
ENSORLG00020014452	pum2	99	87.127	ENSPNAG00000008025	pum2	100	85.983	Pygocentrus_nattereri
ENSORLG00020014452	pum2	100	75.150	ENSRNOG00000006180	Pum2	100	90.441	Rattus_norvegicus
ENSORLG00020014452	pum2	100	81.933	ENSRBIG00000044880	PUM2	91	90.931	Rhinopithecus_bieti
ENSORLG00020014452	pum2	100	81.933	ENSSBOG00000022007	PUM2	91	90.931	Saimiri_boliviensis_boliviensis
ENSORLG00020014452	pum2	94	78.826	ENSSHAG00000002778	PUM2	96	87.255	Sarcophilus_harrisii
ENSORLG00020014452	pum2	90	76.507	ENSSFOG00015003476	pum2	100	76.483	Scleropages_formosus
ENSORLG00020014452	pum2	100	89.786	ENSSMAG00000018236	pum2	100	90.198	Scophthalmus_maximus
ENSORLG00020014452	pum2	92	92.171	ENSSDUG00000001800	pum2	100	91.858	Seriola_dumerili
ENSORLG00020014452	pum2	100	92.086	ENSSLDG00000000981	pum2	100	91.921	Seriola_lalandi_dorsalis
ENSORLG00020014452	pum2	96	69.444	ENSSARG00000010992	PUM2	76	80.909	Sorex_araneus
ENSORLG00020014452	pum2	99	81.513	ENSSPUG00000017012	PUM2	99	90.441	Sphenodon_punctatus
ENSORLG00020014452	pum2	100	93.617	ENSSPAG00000022948	pum2	100	93.212	Stegastes_partitus
ENSORLG00020014452	pum2	99	80.533	ENSSSCG00000008600	PUM2	95	90.931	Sus_scrofa
ENSORLG00020014452	pum2	100	81.723	ENSTGUG00000013149	PUM2	96	90.686	Taeniopygia_guttata
ENSORLG00020014452	pum2	100	87.140	ENSTRUG00000018167	pum2	100	86.291	Takifugu_rubripes
ENSORLG00020014452	pum2	100	89.010	ENSTNIG00000003116	pum2	100	88.423	Tetraodon_nigroviridis
ENSORLG00020014452	pum2	81	81.172	ENSTBEG00000008729	PUM2	79	86.071	Tupaia_belangeri
ENSORLG00020014452	pum2	99	81.172	ENSTTRG00000004887	PUM2	96	90.000	Tursiops_truncatus
ENSORLG00020014452	pum2	69	81.590	ENSUAMG00000008120	PUM2	97	90.488	Ursus_americanus
ENSORLG00020014452	pum2	100	75.251	ENSUMAG00000023198	PUM2	100	73.547	Ursus_maritimus
ENSORLG00020014452	pum2	90	74.423	ENSVPAG00000005056	PUM2	100	73.223	Vicugna_pacos
ENSORLG00020014452	pum2	100	75.251	ENSVVUG00000014829	PUM2	100	73.547	Vulpes_vulpes
ENSORLG00020014452	pum2	100	68.522	ENSXETG00000008903	pum2	82	88.235	Xenopus_tropicalis
ENSORLG00020014452	pum2	92	92.984	ENSXCOG00000002556	pum2	100	92.670	Xiphophorus_couchianus
ENSORLG00020014452	pum2	100	92.799	ENSXMAG00000017682	pum2	100	92.495	Xiphophorus_maculatus