EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020014780 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpd
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein D
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 15314 bases
Position: chr12:2277401-2292714
Accession: ZDB-GENE-070424-97
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020013808	CBFNT	PF08143.11	5.5e-07	1	1
ENSORLP00020013781	CBFNT	PF08143.11	1.6e-06	1	1
ENSORLP00020013794	CBFNT	PF08143.11	1.6e-06	1	1
ENSORLP00020013781	RRM_1	PF00076.22	4.9e-34	1	2
ENSORLP00020013781	RRM_1	PF00076.22	4.9e-34	2	2
ENSORLP00020013794	RRM_1	PF00076.22	4.9e-34	1	2
ENSORLP00020013794	RRM_1	PF00076.22	4.9e-34	2	2
ENSORLP00020013808	RRM_1	PF00076.22	7.9e-34	1	2
ENSORLP00020013808	RRM_1	PF00076.22	7.9e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020032787	-	1285	-	ENSORLP00020013808	389 (aa)	-	-
ENSORLT00020021370	-	2089	-	ENSORLP00020013794	349 (aa)	-	-
ENSORLT00020021340	-	2060	-	ENSORLP00020013781	349 (aa)	-	-

Gene Model

Click here to download ENSORLG00020014780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020014780's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020014780	hnrnpd	58	40.260	ENSORLG00020022498	-	88	40.260
ENSORLG00020014780	hnrnpd	79	62.319	ENSORLG00020007776	hnrnpabb	90	61.189
ENSORLG00020014780	hnrnpd	66	32.961	ENSORLG00020007109	-	57	33.333
ENSORLG00020014780	hnrnpd	79	36.879	ENSORLG00020008266	MSI1	54	47.024
ENSORLG00020014780	hnrnpd	51	39.080	ENSORLG00020007505	-	55	42.667
ENSORLG00020014780	hnrnpd	53	40.838	ENSORLG00020020788	hnrnpa3	50	42.941
ENSORLG00020014780	hnrnpd	58	37.885	ENSORLG00020015195	dazap1	50	40.000
ENSORLG00020014780	hnrnpd	51	40.230	ENSORLG00020006043	-	56	44.000
ENSORLG00020014780	hnrnpd	78	64.260	ENSORLG00020012133	hnrnpaba	88	56.610
ENSORLG00020014780	hnrnpd	66	36.842	ENSORLG00020021556	msi2a	64	43.434
ENSORLG00020014780	hnrnpd	52	40.230	ENSORLG00020006029	-	57	44.000
ENSORLG00020014780	hnrnpd	61	37.255	ENSORLG00020022487	-	80	33.793
ENSORLG00020014780	hnrnpd	51	39.891	ENSORLG00020006582	hnrnpa1a	80	41.176
ENSORLG00020014780	hnrnpd	53	34.343	ENSORLG00020007084	-	71	34.343
ENSORLG00020014780	hnrnpd	51	32.759	ENSORLG00020008203	-	59	39.080

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020014780	hnrnpd	83	83.636	ENSG00000138668	HNRNPD	100	87.387	Homo_sapiens
ENSORLG00020014780	hnrnpd	83	89.965	ENSAPOG00000006184	hnrnpd	87	100.000	Acanthochromis_polyacanthus
ENSORLG00020014780	hnrnpd	83	78.231	ENSAMEG00000005158	HNRNPD	92	78.231	Ailuropoda_melanoleuca
ENSORLG00020014780	hnrnpd	66	92.140	ENSACIG00000008353	hnrnpd	77	87.826	Amphilophus_citrinellus
ENSORLG00020014780	hnrnpd	83	89.619	ENSAOCG00000014191	hnrnpd	87	100.000	Amphiprion_ocellaris
ENSORLG00020014780	hnrnpd	83	89.965	ENSAPEG00000005603	hnrnpd	94	90.311	Amphiprion_percula
ENSORLG00020014780	hnrnpd	83	89.619	ENSATEG00000007097	hnrnpd	94	89.965	Anabas_testudineus
ENSORLG00020014780	hnrnpd	83	81.712	ENSACAG00000010342	HNRNPD	100	81.712	Anolis_carolinensis
ENSORLG00020014780	hnrnpd	83	83.636	ENSANAG00000035221	HNRNPD	82	83.636	Aotus_nancymaae
ENSORLG00020014780	hnrnpd	83	89.273	ENSACLG00000025213	hnrnpd	94	86.159	Astatotilapia_calliptera
ENSORLG00020014780	hnrnpd	83	90.000	ENSACLG00000026497	hnrnpd	100	86.538	Astatotilapia_calliptera
ENSORLG00020014780	hnrnpd	83	86.331	ENSAMXG00000001477	hnrnpd	89	82.734	Astyanax_mexicanus
ENSORLG00020014780	hnrnpd	83	78.231	ENSBTAG00000013952	HNRNPD	83	78.231	Bos_taurus
ENSORLG00020014780	hnrnpd	83	83.636	ENSCJAG00000015165	HNRNPD	82	83.636	Callithrix_jacchus
ENSORLG00020014780	hnrnpd	83	78.231	ENSCAFG00000025045	HNRNPD	83	78.231	Canis_familiaris
ENSORLG00020014780	hnrnpd	83	78.231	ENSCAFG00020010713	HNRNPD	83	78.231	Canis_lupus_dingo
ENSORLG00020014780	hnrnpd	83	83.636	ENSCHIG00000022317	HNRNPD	82	83.636	Capra_hircus
ENSORLG00020014780	hnrnpd	81	82.673	ENSTSYG00000010395	HNRNPD	100	82.673	Carlito_syrichta
ENSORLG00020014780	hnrnpd	83	77.220	ENSCPOG00000040484	HNRNPD	77	77.220	Cavia_porcellus
ENSORLG00020014780	hnrnpd	57	59.091	ENSCCAG00000021563	-	72	63.380	Cebus_capucinus
ENSORLG00020014780	hnrnpd	83	83.636	ENSCCAG00000024528	HNRNPD	82	83.636	Cebus_capucinus
ENSORLG00020014780	hnrnpd	83	83.636	ENSCATG00000039829	HNRNPD	82	83.636	Cercocebus_atys
ENSORLG00020014780	hnrnpd	83	83.636	ENSCLAG00000006540	HNRNPD	92	83.636	Chinchilla_lanigera
ENSORLG00020014780	hnrnpd	83	78.231	ENSCSAG00000004463	HNRNPD	83	78.231	Chlorocebus_sabaeus
ENSORLG00020014780	hnrnpd	83	80.970	ENSCHOG00000000045	HNRNPD	98	80.970	Choloepus_hoffmanni
ENSORLG00020014780	hnrnpd	83	83.704	ENSCPBG00000008025	HNRNPD	86	82.332	Chrysemys_picta_bellii
ENSORLG00020014780	hnrnpd	83	84.000	ENSCANG00000018501	HNRNPD	82	84.000	Colobus_angolensis_palliatus
ENSORLG00020014780	hnrnpd	83	84.000	ENSCGRG00001014634	Hnrnpd	82	84.000	Cricetulus_griseus_chok1gshd
ENSORLG00020014780	hnrnpd	83	81.041	ENSCGRG00000007563	Hnrnpd	96	81.041	Cricetulus_griseus_crigri
ENSORLG00020014780	hnrnpd	83	84.068	ENSCSEG00000010909	hnrnpd	93	83.051	Cynoglossus_semilaevis
ENSORLG00020014780	hnrnpd	83	87.755	ENSCVAG00000019790	hnrnpd	94	88.095	Cyprinodon_variegatus
ENSORLG00020014780	hnrnpd	83	85.315	ENSDARG00000059246	hnrnpd	90	82.517	Danio_rerio
ENSORLG00020014780	hnrnpd	55	71.023	ENSDNOG00000041055	-	69	71.023	Dasypus_novemcinctus
ENSORLG00020014780	hnrnpd	83	81.343	ENSDNOG00000013830	-	76	81.343	Dasypus_novemcinctus
ENSORLG00020014780	hnrnpd	63	69.302	ENSDNOG00000045079	-	61	72.376	Dasypus_novemcinctus
ENSORLG00020014780	hnrnpd	83	83.636	ENSDORG00000012507	Hnrnpd	98	81.944	Dipodomys_ordii
ENSORLG00020014780	hnrnpd	83	78.893	ENSETEG00000016709	HNRNPD	83	78.912	Echinops_telfairi
ENSORLG00020014780	hnrnpd	83	83.636	ENSEASG00005016278	HNRNPD	82	83.636	Equus_asinus_asinus
ENSORLG00020014780	hnrnpd	83	78.231	ENSECAG00000009344	HNRNPD	83	78.231	Equus_caballus
ENSORLG00020014780	hnrnpd	83	69.048	ENSEEUG00000007552	HNRNPD	83	69.048	Erinaceus_europaeus
ENSORLG00020014780	hnrnpd	68	81.513	ENSELUG00000003230	hnrnpd	75	83.333	Esox_lucius
ENSORLG00020014780	hnrnpd	83	83.636	ENSFCAG00000027404	HNRNPD	83	78.231	Felis_catus
ENSORLG00020014780	hnrnpd	83	83.636	ENSFALG00000005716	HNRNPD	87	81.533	Ficedula_albicollis
ENSORLG00020014780	hnrnpd	83	81.716	ENSFDAG00000007958	HNRNPD	81	81.413	Fukomys_damarensis
ENSORLG00020014780	hnrnpd	83	87.075	ENSFHEG00000006838	hnrnpd	94	88.776	Fundulus_heteroclitus
ENSORLG00020014780	hnrnpd	83	74.662	ENSGMOG00000018481	hnrnpd	94	76.271	Gadus_morhua
ENSORLG00020014780	hnrnpd	83	84.074	ENSGALG00000011184	HNRNPD	100	83.658	Gallus_gallus
ENSORLG00020014780	hnrnpd	84	85.953	ENSGAFG00000003714	hnrnpd	93	85.953	Gambusia_affinis
ENSORLG00020014780	hnrnpd	83	82.712	ENSGACG00000015669	hnrnpd	94	83.051	Gasterosteus_aculeatus
ENSORLG00020014780	hnrnpd	83	78.201	ENSGAGG00000003656	HNRNPD	89	77.152	Gopherus_agassizii
ENSORLG00020014780	hnrnpd	83	83.721	ENSGGOG00000026760	HNRNPD	94	83.721	Gorilla_gorilla
ENSORLG00020014780	hnrnpd	83	89.273	ENSHBUG00000011794	hnrnpd	94	86.159	Haplochromis_burtoni
ENSORLG00020014780	hnrnpd	83	84.000	ENSHGLG00000004214	HNRNPD	82	84.000	Heterocephalus_glaber_female
ENSORLG00020014780	hnrnpd	83	84.109	ENSHGLG00100005996	HNRNPD	100	84.047	Heterocephalus_glaber_male
ENSORLG00020014780	hnrnpd	83	81.597	ENSHCOG00000000087	hnrnpd	88	78.049	Hippocampus_comes
ENSORLG00020014780	hnrnpd	83	79.783	ENSIPUG00000024954	hnrnpd	89	83.394	Ictalurus_punctatus
ENSORLG00020014780	hnrnpd	83	83.636	ENSSTOG00000013970	HNRNPD	82	83.636	Ictidomys_tridecemlineatus
ENSORLG00020014780	hnrnpd	83	83.636	ENSJJAG00000023387	Hnrnpd	93	83.636	Jaculus_jaculus
ENSORLG00020014780	hnrnpd	83	89.680	ENSKMAG00000004310	hnrnpd	89	91.103	Kryptolebias_marmoratus
ENSORLG00020014780	hnrnpd	83	89.965	ENSLBEG00000027508	hnrnpd	94	86.851	Labrus_bergylta
ENSORLG00020014780	hnrnpd	82	81.597	ENSLACG00000005306	HNRNPD	91	79.094	Latimeria_chalumnae
ENSORLG00020014780	hnrnpd	83	85.199	ENSLOCG00000010743	hnrnpd	88	80.866	Lepisosteus_oculatus
ENSORLG00020014780	hnrnpd	83	81.041	ENSLAFG00000016483	HNRNPD	98	81.041	Loxodonta_africana
ENSORLG00020014780	hnrnpd	83	83.636	ENSMFAG00000031674	HNRNPD	82	83.636	Macaca_fascicularis
ENSORLG00020014780	hnrnpd	83	83.636	ENSMNEG00000028199	HNRNPD	82	83.636	Macaca_nemestrina
ENSORLG00020014780	hnrnpd	83	83.636	ENSMLEG00000028370	HNRNPD	82	83.636	Mandrillus_leucophaeus
ENSORLG00020014780	hnrnpd	83	91.003	ENSMAMG00000004971	hnrnpd	91	87.543	Mastacembelus_armatus
ENSORLG00020014780	hnrnpd	83	89.273	ENSMZEG00005007558	hnrnpd	94	86.159	Maylandia_zebra
ENSORLG00020014780	hnrnpd	83	83.721	ENSMGAG00000008051	HNRNPD	100	83.721	Meleagris_gallopavo
ENSORLG00020014780	hnrnpd	83	84.000	ENSMAUG00000008830	Hnrnpd	83	84.000	Mesocricetus_auratus
ENSORLG00020014780	hnrnpd	83	84.074	ENSMICG00000010984	HNRNPD	86	83.636	Microcebus_murinus
ENSORLG00020014780	hnrnpd	83	84.000	ENSMOCG00000021398	Hnrnpd	82	84.000	Microtus_ochrogaster
ENSORLG00020014780	hnrnpd	83	85.121	ENSMMOG00000008627	hnrnpd	94	86.851	Mola_mola
ENSORLG00020014780	hnrnpd	79	77.778	ENSMODG00000011898	HNRNPD	79	77.778	Monodelphis_domestica
ENSORLG00020014780	hnrnpd	83	90.311	ENSMALG00000016024	hnrnpd	94	91.003	Monopterus_albus
ENSORLG00020014780	hnrnpd	83	84.000	MGP_CAROLIEiJ_G0027446	Hnrnpd	100	88.000	Mus_caroli
ENSORLG00020014780	hnrnpd	83	84.000	ENSMUSG00000000568	Hnrnpd	100	88.000	Mus_musculus
ENSORLG00020014780	hnrnpd	83	84.000	MGP_PahariEiJ_G0017224	Hnrnpd	100	88.000	Mus_pahari
ENSORLG00020014780	hnrnpd	83	84.000	MGP_SPRETEiJ_G0028443	Hnrnpd	100	88.000	Mus_spretus
ENSORLG00020014780	hnrnpd	83	81.343	ENSMPUG00000014782	HNRNPD	98	81.343	Mustela_putorius_furo
ENSORLG00020014780	hnrnpd	83	72.449	ENSMLUG00000010628	HNRNPD	83	72.449	Myotis_lucifugus
ENSORLG00020014780	hnrnpd	83	84.000	ENSNGAG00000013451	Hnrnpd	83	84.000	Nannospalax_galili
ENSORLG00020014780	hnrnpd	83	89.619	ENSNBRG00000019548	hnrnpd	94	86.505	Neolamprologus_brichardi
ENSORLG00020014780	hnrnpd	83	83.824	ENSNLEG00000008600	HNRNPD	84	83.824	Nomascus_leucogenys
ENSORLG00020014780	hnrnpd	61	81.481	ENSMEUG00000006804	-	58	81.481	Notamacropus_eugenii
ENSORLG00020014780	hnrnpd	83	75.510	ENSOPRG00000009336	HNRNPD	82	74.150	Ochotona_princeps
ENSORLG00020014780	hnrnpd	83	83.636	ENSODEG00000001897	HNRNPD	87	83.636	Octodon_degus
ENSORLG00020014780	hnrnpd	83	89.273	ENSONIG00000015390	hnrnpd	99	82.903	Oreochromis_niloticus
ENSORLG00020014780	hnrnpd	83	84.047	ENSOANG00000001932	HNRNPD	100	84.047	Ornithorhynchus_anatinus
ENSORLG00020014780	hnrnpd	83	81.041	ENSOCUG00000001357	HNRNPD	98	81.041	Oryctolagus_cuniculus
ENSORLG00020014780	hnrnpd	83	98.601	ENSORLG00000001833	hnrnpd	94	98.601	Oryzias_latipes
ENSORLG00020014780	hnrnpd	83	98.601	ENSORLG00015002382	hnrnpd	100	97.306	Oryzias_latipes_hsok
ENSORLG00020014780	hnrnpd	83	94.810	ENSOMEG00000018558	hnrnpd	94	94.810	Oryzias_melastigma
ENSORLG00020014780	hnrnpd	83	78.231	ENSOGAG00000004075	HNRNPD	83	78.231	Otolemur_garnettii
ENSORLG00020014780	hnrnpd	83	81.343	ENSOARG00000000579	HNRNPD	98	81.343	Ovis_aries
ENSORLG00020014780	hnrnpd	81	82.673	ENSPPAG00000035750	HNRNPD	100	82.673	Pan_paniscus
ENSORLG00020014780	hnrnpd	83	83.636	ENSPPRG00000012258	HNRNPD	82	83.636	Panthera_pardus
ENSORLG00020014780	hnrnpd	83	83.636	ENSPTIG00000019434	HNRNPD	96	83.636	Panthera_tigris_altaica
ENSORLG00020014780	hnrnpd	83	83.636	ENSPTRG00000016215	HNRNPD	82	83.636	Pan_troglodytes
ENSORLG00020014780	hnrnpd	83	83.636	ENSPANG00000011785	HNRNPD	82	83.636	Papio_anubis
ENSORLG00020014780	hnrnpd	93	73.556	ENSPKIG00000025512	hnrnpd	88	80.505	Paramormyrops_kingsleyae
ENSORLG00020014780	hnrnpd	68	85.922	ENSPSIG00000017029	HNRNPD	79	86.070	Pelodiscus_sinensis
ENSORLG00020014780	hnrnpd	77	74.532	ENSPMGG00000017169	hnrnpd	74	80.822	Periophthalmus_magnuspinnatus
ENSORLG00020014780	hnrnpd	83	77.895	ENSPEMG00000014804	Hnrnpd	91	76.817	Peromyscus_maniculatus_bairdii
ENSORLG00020014780	hnrnpd	83	83.032	ENSPCIG00000003112	HNRNPD	78	83.032	Phascolarctos_cinereus
ENSORLG00020014780	hnrnpd	84	87.162	ENSPFOG00000002596	hnrnpd	93	87.500	Poecilia_formosa
ENSORLG00020014780	hnrnpd	84	87.162	ENSPLAG00000004297	hnrnpd	93	88.514	Poecilia_latipinna
ENSORLG00020014780	hnrnpd	84	87.162	ENSPMEG00000000152	hnrnpd	93	87.500	Poecilia_mexicana
ENSORLG00020014780	hnrnpd	83	88.506	ENSPREG00000018081	hnrnpd	95	86.207	Poecilia_reticulata
ENSORLG00020014780	hnrnpd	60	70.079	ENSPPYG00000020411	-	74	75.000	Pongo_abelii
ENSORLG00020014780	hnrnpd	83	78.231	ENSPPYG00000014885	HNRNPD	83	78.231	Pongo_abelii
ENSORLG00020014780	hnrnpd	83	76.949	ENSPCAG00000002182	HNRNPD	83	76.949	Procavia_capensis
ENSORLG00020014780	hnrnpd	83	83.636	ENSPCOG00000021331	HNRNPD	82	83.636	Propithecus_coquereli
ENSORLG00020014780	hnrnpd	83	73.469	ENSPVAG00000000003	HNRNPD	83	73.469	Pteropus_vampyrus
ENSORLG00020014780	hnrnpd	83	88.927	ENSPNYG00000004884	hnrnpd	94	85.813	Pundamilia_nyererei
ENSORLG00020014780	hnrnpd	83	79.443	ENSPNAG00000016368	hnrnpd	92	81.533	Pygocentrus_nattereri
ENSORLG00020014780	hnrnpd	83	82.909	ENSRNOG00000002292	Hnrnpd	82	82.909	Rattus_norvegicus
ENSORLG00020014780	hnrnpd	83	83.636	ENSRBIG00000035345	HNRNPD	82	83.636	Rhinopithecus_bieti
ENSORLG00020014780	hnrnpd	83	83.636	ENSRROG00000011888	HNRNPD	82	83.636	Rhinopithecus_roxellana
ENSORLG00020014780	hnrnpd	83	83.636	ENSSBOG00000032881	HNRNPD	82	83.636	Saimiri_boliviensis_boliviensis
ENSORLG00020014780	hnrnpd	83	81.343	ENSSHAG00000013312	HNRNPD	98	81.343	Sarcophilus_harrisii
ENSORLG00020014780	hnrnpd	93	76.292	ENSSFOG00015005913	hnrnpd	99	72.036	Scleropages_formosus
ENSORLG00020014780	hnrnpd	82	85.172	ENSSMAG00000009686	hnrnpd	91	84.138	Scophthalmus_maximus
ENSORLG00020014780	hnrnpd	83	88.927	ENSSDUG00000010792	hnrnpd	94	89.273	Seriola_dumerili
ENSORLG00020014780	hnrnpd	83	81.661	ENSSLDG00000015962	hnrnpd	91	82.699	Seriola_lalandi_dorsalis
ENSORLG00020014780	hnrnpd	83	79.851	ENSSARG00000006883	HNRNPD	98	79.851	Sorex_araneus
ENSORLG00020014780	hnrnpd	83	80.620	ENSSPUG00000013677	HNRNPD	100	80.156	Sphenodon_punctatus
ENSORLG00020014780	hnrnpd	83	89.965	ENSSPAG00000021014	hnrnpd	87	100.000	Stegastes_partitus
ENSORLG00020014780	hnrnpd	83	83.636	ENSSSCG00000009249	HNRNPD	82	83.636	Sus_scrofa
ENSORLG00020014780	hnrnpd	83	77.855	ENSTGUG00000002858	HNRNPD	94	76.144	Taeniopygia_guttata
ENSORLG00020014780	hnrnpd	84	81.633	ENSTRUG00000018450	hnrnpd	93	78.912	Takifugu_rubripes
ENSORLG00020014780	hnrnpd	63	88.288	ENSTNIG00000013499	hnrnpd	84	90.148	Tetraodon_nigroviridis
ENSORLG00020014780	hnrnpd	83	76.208	ENSTBEG00000002327	HNRNPD	98	76.208	Tupaia_belangeri
ENSORLG00020014780	hnrnpd	83	78.231	ENSTTRG00000007592	HNRNPD	83	78.231	Tursiops_truncatus
ENSORLG00020014780	hnrnpd	99	65.546	ENSUAMG00000011374	HNRNPD	95	65.546	Ursus_americanus
ENSORLG00020014780	hnrnpd	83	81.343	ENSUMAG00000008685	HNRNPD	83	81.343	Ursus_maritimus
ENSORLG00020014780	hnrnpd	83	83.721	ENSVPAG00000004374	HNRNPD	100	83.721	Vicugna_pacos
ENSORLG00020014780	hnrnpd	83	78.231	ENSVVUG00000024658	HNRNPD	83	78.231	Vulpes_vulpes
ENSORLG00020014780	hnrnpd	83	78.832	ENSXETG00000012569	hnrnpd	93	77.091	Xenopus_tropicalis
ENSORLG00020014780	hnrnpd	83	90.000	ENSXCOG00000017639	hnrnpd	100	90.000	Xiphophorus_couchianus
ENSORLG00020014780	hnrnpd	83	86.780	ENSXMAG00000019151	hnrnpd	95	100.000	Xiphophorus_maculatus