EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020014823 (Gene tree)
Gene ID: -
Gene Symbol: zfr
Alias: -
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 21318 bases
Position: chr9:28672649-28693966
Accession: ZDB-GENE-030131-378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020013857	DZF	PF07528.14	7.5e-72	1	1
ENSORLP00020013857	zf-met	PF12874.7	2.4e-21	1	3
ENSORLP00020013857	zf-met	PF12874.7	2.4e-21	2	3
ENSORLP00020013857	zf-met	PF12874.7	2.4e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020032812	-	5016	-	ENSORLP00020013857	1064 (aa)	-	-

Gene Model

Click here to download ENSORLG00020014823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020014823's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020014823	zfr	96	50.652	ENSORLG00020012554	zfr2	51	61.205

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020014823	zfr	99	75.482	ENSG00000056097	ZFR	99	76.125	Homo_sapiens
ENSORLG00020014823	zfr	99	80.501	ENSAPOG00000009740	zfr	99	81.116	Acanthochromis_polyacanthus
ENSORLG00020014823	zfr	99	75.276	ENSAMEG00000006184	ZFR	99	75.251	Ailuropoda_melanoleuca
ENSORLG00020014823	zfr	93	92.818	ENSACIG00000015926	zfr	82	85.140	Amphilophus_citrinellus
ENSORLG00020014823	zfr	99	82.484	ENSAOCG00000013876	zfr	99	83.596	Amphiprion_ocellaris
ENSORLG00020014823	zfr	99	86.098	ENSAPEG00000024383	zfr	99	87.025	Amphiprion_percula
ENSORLG00020014823	zfr	99	86.791	ENSATEG00000010271	zfr	99	87.163	Anabas_testudineus
ENSORLG00020014823	zfr	78	70.071	ENSAPLG00000015627	-	100	70.353	Anas_platyrhynchos
ENSORLG00020014823	zfr	99	74.562	ENSACAG00000007880	ZFR	99	75.000	Anolis_carolinensis
ENSORLG00020014823	zfr	99	75.574	ENSANAG00000023333	ZFR	99	76.217	Aotus_nancymaae
ENSORLG00020014823	zfr	93	92.818	ENSACLG00000016832	zfr	82	85.018	Astatotilapia_calliptera
ENSORLG00020014823	zfr	98	80.943	ENSAMXG00000019511	zfr	99	81.887	Astyanax_mexicanus
ENSORLG00020014823	zfr	99	75.551	ENSBTAG00000008414	ZFR	99	75.616	Bos_taurus
ENSORLG00020014823	zfr	99	75.482	ENSCJAG00000018740	ZFR	99	76.125	Callithrix_jacchus
ENSORLG00020014823	zfr	99	73.602	ENSCAFG00000018886	ZFR	99	75.349	Canis_familiaris
ENSORLG00020014823	zfr	99	75.276	ENSCAFG00020016859	-	99	75.251	Canis_lupus_dingo
ENSORLG00020014823	zfr	99	75.643	ENSCHIG00000007710	ZFR	99	76.379	Capra_hircus
ENSORLG00020014823	zfr	97	74.644	ENSTSYG00000010670	ZFR	98	75.048	Carlito_syrichta
ENSORLG00020014823	zfr	96	61.882	ENSCAPG00000015655	ZFR	99	60.078	Cavia_aperea
ENSORLG00020014823	zfr	96	68.846	ENSCPOG00000000862	ZFR	99	69.904	Cavia_porcellus
ENSORLG00020014823	zfr	99	75.390	ENSCCAG00000024473	ZFR	99	76.125	Cebus_capucinus
ENSORLG00020014823	zfr	99	75.482	ENSCATG00000038311	ZFR	99	76.125	Cercocebus_atys
ENSORLG00020014823	zfr	97	74.549	ENSCLAG00000007408	ZFR	99	75.264	Chinchilla_lanigera
ENSORLG00020014823	zfr	99	75.482	ENSCSAG00000017180	ZFR	99	76.125	Chlorocebus_sabaeus
ENSORLG00020014823	zfr	90	65.000	ENSCHOG00000003848	ZFR	94	65.000	Choloepus_hoffmanni
ENSORLG00020014823	zfr	99	76.195	ENSCPBG00000024211	ZFR	99	76.725	Chrysemys_picta_bellii
ENSORLG00020014823	zfr	99	75.390	ENSCANG00000017807	ZFR	99	76.033	Colobus_angolensis_palliatus
ENSORLG00020014823	zfr	99	75.666	ENSCGRG00001016009	Zfr	99	75.547	Cricetulus_griseus_chok1gshd
ENSORLG00020014823	zfr	98	74.342	ENSCGRG00000001228	Zfr	98	74.390	Cricetulus_griseus_crigri
ENSORLG00020014823	zfr	94	81.212	ENSCSEG00000009224	zfr	82	82.061	Cynoglossus_semilaevis
ENSORLG00020014823	zfr	100	82.375	ENSCSEG00000011169	ZFR	99	82.839	Cynoglossus_semilaevis
ENSORLG00020014823	zfr	98	83.096	ENSCVAG00000016494	zfr	100	83.112	Cyprinodon_variegatus
ENSORLG00020014823	zfr	99	80.684	ENSDARG00000027109	zfr	99	81.793	Danio_rerio
ENSORLG00020014823	zfr	99	75.344	ENSDNOG00000008852	ZFR	99	75.985	Dasypus_novemcinctus
ENSORLG00020014823	zfr	99	74.013	ENSDORG00000016643	Zfr	99	75.298	Dipodomys_ordii
ENSORLG00020014823	zfr	99	70.018	ENSETEG00000008937	ZFR	99	71.021	Echinops_telfairi
ENSORLG00020014823	zfr	99	75.276	ENSEASG00005007104	ZFR	99	75.342	Equus_asinus_asinus
ENSORLG00020014823	zfr	82	73.378	ENSECAG00000012851	ZFR	99	73.807	Equus_caballus
ENSORLG00020014823	zfr	84	74.382	ENSEEUG00000014206	ZFR	82	78.060	Erinaceus_europaeus
ENSORLG00020014823	zfr	100	70.594	ENSELUG00000022743	zfr	99	71.923	Esox_lucius
ENSORLG00020014823	zfr	99	75.368	ENSFCAG00000000354	ZFR	99	75.342	Felis_catus
ENSORLG00020014823	zfr	99	75.554	ENSFALG00000002149	ZFR	99	75.298	Ficedula_albicollis
ENSORLG00020014823	zfr	99	75.093	ENSFDAG00000012993	ZFR	99	75.743	Fukomys_damarensis
ENSORLG00020014823	zfr	57	80.428	ENSFHEG00000012064	zfr	93	80.524	Fundulus_heteroclitus
ENSORLG00020014823	zfr	94	91.892	ENSGMOG00000003967	zfr	93	90.323	Gadus_morhua
ENSORLG00020014823	zfr	99	77.201	ENSGALG00000034488	-	99	75.989	Gallus_gallus
ENSORLG00020014823	zfr	99	76.389	ENSGALG00000003235	-	99	76.944	Gallus_gallus
ENSORLG00020014823	zfr	90	87.786	ENSGAFG00000016229	zfr	97	87.786	Gambusia_affinis
ENSORLG00020014823	zfr	99	79.909	ENSGACG00000005045	zfr	99	80.740	Gasterosteus_aculeatus
ENSORLG00020014823	zfr	95	76.019	ENSGAGG00000013544	ZFR	99	76.728	Gopherus_agassizii
ENSORLG00020014823	zfr	99	75.390	ENSGGOG00000016302	ZFR	99	76.033	Gorilla_gorilla
ENSORLG00020014823	zfr	99	75.390	ENSHGLG00000008088	ZFR	99	75.941	Heterocephalus_glaber_female
ENSORLG00020014823	zfr	96	75.072	ENSHGLG00100016776	ZFR	98	75.647	Heterocephalus_glaber_male
ENSORLG00020014823	zfr	99	82.212	ENSHCOG00000001548	zfr	99	82.472	Hippocampus_comes
ENSORLG00020014823	zfr	99	81.071	ENSIPUG00000008192	zfr	99	82.271	Ictalurus_punctatus
ENSORLG00020014823	zfr	99	75.346	ENSSTOG00000008742	ZFR	99	75.229	Ictidomys_tridecemlineatus
ENSORLG00020014823	zfr	99	68.981	ENSJJAG00000023064	Zfr	98	70.627	Jaculus_jaculus
ENSORLG00020014823	zfr	92	83.723	ENSKMAG00000009468	zfr	99	86.572	Kryptolebias_marmoratus
ENSORLG00020014823	zfr	99	85.264	ENSLBEG00000010783	zfr	99	85.357	Labrus_bergylta
ENSORLG00020014823	zfr	99	71.415	ENSLACG00000000831	ZFR	99	73.193	Latimeria_chalumnae
ENSORLG00020014823	zfr	99	80.217	ENSLOCG00000006727	zfr	99	80.849	Lepisosteus_oculatus
ENSORLG00020014823	zfr	98	74.859	ENSLAFG00000002308	ZFR	99	75.117	Loxodonta_africana
ENSORLG00020014823	zfr	99	74.564	ENSMFAG00000042691	ZFR	99	75.207	Macaca_fascicularis
ENSORLG00020014823	zfr	99	75.482	ENSMMUG00000001317	ZFR	99	76.125	Macaca_mulatta
ENSORLG00020014823	zfr	99	75.482	ENSMNEG00000029441	ZFR	99	76.125	Macaca_nemestrina
ENSORLG00020014823	zfr	99	73.204	ENSMLEG00000028503	ZFR	99	75.621	Mandrillus_leucophaeus
ENSORLG00020014823	zfr	99	86.059	ENSMAMG00000017351	zfr	99	85.595	Mastacembelus_armatus
ENSORLG00020014823	zfr	93	92.818	ENSMZEG00005021243	zfr	82	85.018	Maylandia_zebra
ENSORLG00020014823	zfr	96	63.838	ENSMGAG00000002841	ZFR	71	67.024	Meleagris_gallopavo
ENSORLG00020014823	zfr	99	75.666	ENSMAUG00000000976	Zfr	99	75.091	Mesocricetus_auratus
ENSORLG00020014823	zfr	99	75.298	ENSMICG00000001244	ZFR	99	75.274	Microcebus_murinus
ENSORLG00020014823	zfr	99	75.599	ENSMOCG00000018630	Zfr	99	76.103	Microtus_ochrogaster
ENSORLG00020014823	zfr	99	79.647	ENSMMOG00000012585	zfr	90	82.945	Mola_mola
ENSORLG00020014823	zfr	99	75.919	ENSMODG00000020412	ZFR	99	76.562	Monodelphis_domestica
ENSORLG00020014823	zfr	99	79.963	ENSMALG00000007123	zfr	94	95.161	Monopterus_albus
ENSORLG00020014823	zfr	99	75.322	MGP_CAROLIEiJ_G0019681	Zfr	100	77.517	Mus_caroli
ENSORLG00020014823	zfr	99	75.298	ENSMUSG00000022201	Zfr	100	80.966	Mus_musculus
ENSORLG00020014823	zfr	99	75.414	MGP_PahariEiJ_G0016057	Zfr	100	77.517	Mus_pahari
ENSORLG00020014823	zfr	99	75.207	MGP_SPRETEiJ_G0020574	Zfr	100	77.517	Mus_spretus
ENSORLG00020014823	zfr	73	72.932	ENSMPUG00000015193	-	99	73.292	Mustela_putorius_furo
ENSORLG00020014823	zfr	97	74.976	ENSMLUG00000011797	ZFR	99	75.766	Myotis_lucifugus
ENSORLG00020014823	zfr	99	75.758	ENSNGAG00000018328	Zfr	99	76.033	Nannospalax_galili
ENSORLG00020014823	zfr	93	92.818	ENSNBRG00000008378	zfr	82	81.166	Neolamprologus_brichardi
ENSORLG00020014823	zfr	99	72.903	ENSNLEG00000014098	ZFR	99	75.526	Nomascus_leucogenys
ENSORLG00020014823	zfr	96	70.617	ENSMEUG00000010225	ZFR	99	71.484	Notamacropus_eugenii
ENSORLG00020014823	zfr	83	81.526	ENSOPRG00000016756	ZFR	84	81.526	Ochotona_princeps
ENSORLG00020014823	zfr	96	75.168	ENSODEG00000001990	ZFR	99	75.168	Octodon_degus
ENSORLG00020014823	zfr	80	78.444	ENSONIG00000013960	zfr	73	84.241	Oreochromis_niloticus
ENSORLG00020014823	zfr	96	75.889	ENSOANG00000014434	ZFR	99	75.285	Ornithorhynchus_anatinus
ENSORLG00020014823	zfr	99	75.298	ENSOCUG00000016737	ZFR	99	75.365	Oryctolagus_cuniculus
ENSORLG00020014823	zfr	100	99.718	ENSORLG00000017243	zfr	100	99.718	Oryzias_latipes
ENSORLG00020014823	zfr	100	99.624	ENSORLG00015005801	zfr	100	99.624	Oryzias_latipes_hsok
ENSORLG00020014823	zfr	100	96.258	ENSOMEG00000003336	zfr	100	96.258	Oryzias_melastigma
ENSORLG00020014823	zfr	99	72.936	ENSOGAG00000015117	ZFR	99	73.200	Otolemur_garnettii
ENSORLG00020014823	zfr	96	73.971	ENSOARG00000012233	ZFR	99	73.971	Ovis_aries
ENSORLG00020014823	zfr	97	74.549	ENSPPAG00000027447	ZFR	99	75.407	Pan_paniscus
ENSORLG00020014823	zfr	99	75.368	ENSPPRG00000008253	ZFR	99	75.342	Panthera_pardus
ENSORLG00020014823	zfr	99	72.886	ENSPTIG00000010038	ZFR	99	72.985	Panthera_tigris_altaica
ENSORLG00020014823	zfr	99	75.482	ENSPTRG00000016771	ZFR	99	76.125	Pan_troglodytes
ENSORLG00020014823	zfr	99	74.331	ENSPANG00000003729	ZFR	99	74.885	Papio_anubis
ENSORLG00020014823	zfr	99	73.285	ENSPKIG00000007596	ZFR	99	73.651	Paramormyrops_kingsleyae
ENSORLG00020014823	zfr	95	86.458	ENSPKIG00000016781	ZFR	99	80.687	Paramormyrops_kingsleyae
ENSORLG00020014823	zfr	95	84.127	ENSPMGG00000015984	zfr	99	84.524	Periophthalmus_magnuspinnatus
ENSORLG00020014823	zfr	97	74.403	ENSPEMG00000014573	Zfr	98	74.288	Peromyscus_maniculatus_bairdii
ENSORLG00020014823	zfr	99	76.081	ENSPCIG00000020906	ZFR	99	76.725	Phascolarctos_cinereus
ENSORLG00020014823	zfr	99	84.465	ENSPFOG00000005931	zfr	100	84.837	Poecilia_formosa
ENSORLG00020014823	zfr	99	83.520	ENSPREG00000011947	zfr	100	84.078	Poecilia_reticulata
ENSORLG00020014823	zfr	96	74.761	ENSPPYG00000015378	ZFR	99	75.335	Pongo_abelii
ENSORLG00020014823	zfr	99	67.401	ENSPCAG00000007277	ZFR	99	68.248	Procavia_capensis
ENSORLG00020014823	zfr	95	74.976	ENSPCOG00000000045	ZFR	99	74.952	Propithecus_coquereli
ENSORLG00020014823	zfr	94	79.878	ENSPVAG00000004780	ZFR	94	79.878	Pteropus_vampyrus
ENSORLG00020014823	zfr	93	92.818	ENSPNYG00000006239	zfr	82	84.896	Pundamilia_nyererei
ENSORLG00020014823	zfr	99	82.282	ENSPNAG00000025151	zfr	99	83.148	Pygocentrus_nattereri
ENSORLG00020014823	zfr	99	75.298	ENSRNOG00000011627	Zfr	99	79.688	Rattus_norvegicus
ENSORLG00020014823	zfr	99	75.390	ENSRBIG00000041561	ZFR	99	76.033	Rhinopithecus_bieti
ENSORLG00020014823	zfr	99	75.390	ENSRROG00000044008	ZFR	99	76.033	Rhinopithecus_roxellana
ENSORLG00020014823	zfr	96	74.976	ENSSBOG00000024150	ZFR	99	75.551	Saimiri_boliviensis_boliviensis
ENSORLG00020014823	zfr	96	75.839	ENSSHAG00000015478	ZFR	99	76.414	Sarcophilus_harrisii
ENSORLG00020014823	zfr	99	74.125	ENSSFOG00015017300	ZFR	99	74.770	Scleropages_formosus
ENSORLG00020014823	zfr	99	84.389	ENSSMAG00000000320	zfr	99	84.757	Scophthalmus_maximus
ENSORLG00020014823	zfr	99	87.082	ENSSDUG00000013882	zfr	99	87.361	Seriola_dumerili
ENSORLG00020014823	zfr	93	85.541	ENSSLDG00000000762	zfr	99	85.419	Seriola_lalandi_dorsalis
ENSORLG00020014823	zfr	90	82.432	ENSSARG00000006571	ZFR	93	82.432	Sorex_araneus
ENSORLG00020014823	zfr	96	76.420	ENSSPUG00000016786	ZFR	99	75.263	Sphenodon_punctatus
ENSORLG00020014823	zfr	99	86.549	ENSSPAG00000019293	zfr	99	87.848	Stegastes_partitus
ENSORLG00020014823	zfr	99	75.368	ENSSSCG00000027681	ZFR	99	75.342	Sus_scrofa
ENSORLG00020014823	zfr	99	75.439	ENSTGUG00000001909	ZFR	99	75.115	Taeniopygia_guttata
ENSORLG00020014823	zfr	99	85.434	ENSTRUG00000016620	zfr	99	86.088	Takifugu_rubripes
ENSORLG00020014823	zfr	56	80.905	ENSTNIG00000018856	zfr	99	80.402	Tetraodon_nigroviridis
ENSORLG00020014823	zfr	95	71.379	ENSTBEG00000017687	ZFR	95	75.532	Tupaia_belangeri
ENSORLG00020014823	zfr	99	71.324	ENSTTRG00000017321	ZFR	99	71.233	Tursiops_truncatus
ENSORLG00020014823	zfr	78	72.738	ENSUAMG00000000172	-	99	73.046	Ursus_americanus
ENSORLG00020014823	zfr	78	72.738	ENSUMAG00000013805	-	99	73.046	Ursus_maritimus
ENSORLG00020014823	zfr	99	72.978	ENSVPAG00000011011	ZFR	99	72.877	Vicugna_pacos
ENSORLG00020014823	zfr	99	75.368	ENSVVUG00000022171	-	99	76.011	Vulpes_vulpes
ENSORLG00020014823	zfr	99	69.630	ENSXETG00000015598	zfr	99	70.185	Xenopus_tropicalis
ENSORLG00020014823	zfr	99	84.372	ENSXCOG00000009361	zfr	100	84.279	Xiphophorus_couchianus
ENSORLG00020014823	zfr	99	84.465	ENSXMAG00000013356	zfr	100	84.372	Xiphophorus_maculatus