EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020014934 (Gene tree)
Gene ID: -
Gene Symbol: mrpl54
Alias: -
Full Name: mitochondrial ribosomal protein L54
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 3965 bases
Position: chr4:29732799-29736763
Accession: ZDB-GENE-050208-381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020030458	Ribosomal_L37	PF08561.10	1.6e-06	1	1
ENSORLP00020030456	Ribosomal_L37	PF08561.10	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020021585	-	315	-	ENSORLP00020030458	104 (aa)	-	-
ENSORLT00020021589	-	363	-	ENSORLP00020030456	120 (aa)	-	-

Gene Model

Click here to download ENSORLG00020014934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020014934's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020014934	mrpl54	89	58.065	ENSG00000183617	MRPL54	67	58.065	Homo_sapiens
ENSORLG00020014934	mrpl54	91	80.000	ENSAPOG00000022643	mrpl54	72	78.788	Acanthochromis_polyacanthus
ENSORLG00020014934	mrpl54	85	57.955	ENSAMEG00000005908	MRPL54	70	56.250	Ailuropoda_melanoleuca
ENSORLG00020014934	mrpl54	85	82.955	ENSACIG00000006438	mrpl54	85	71.795	Amphilophus_citrinellus
ENSORLG00020014934	mrpl54	82	81.176	ENSAOCG00000006430	mrpl54	70	81.250	Amphiprion_ocellaris
ENSORLG00020014934	mrpl54	82	81.176	ENSAPEG00000023406	mrpl54	70	81.250	Amphiprion_percula
ENSORLG00020014934	mrpl54	83	74.419	ENSATEG00000004969	mrpl54	72	73.737	Anabas_testudineus
ENSORLG00020014934	mrpl54	92	55.208	ENSACAG00000017747	-	93	53.000	Anolis_carolinensis
ENSORLG00020014934	mrpl54	89	58.065	ENSANAG00000028692	MRPL54	67	58.065	Aotus_nancymaae
ENSORLG00020014934	mrpl54	85	79.545	ENSACLG00000001877	mrpl54	85	69.231	Astatotilapia_calliptera
ENSORLG00020014934	mrpl54	79	70.732	ENSAMXG00000018143	mrpl54	70	68.687	Astyanax_mexicanus
ENSORLG00020014934	mrpl54	82	57.647	ENSBTAG00000008396	MRPL54	71	52.041	Bos_taurus
ENSORLG00020014934	mrpl54	74	38.272	WBGene00009128	mrpl-54	60	38.272	Caenorhabditis_elegans
ENSORLG00020014934	mrpl54	89	56.989	ENSCJAG00000014998	MRPL54	67	56.989	Callithrix_jacchus
ENSORLG00020014934	mrpl54	85	56.818	ENSCAFG00000019192	MRPL54	70	55.208	Canis_familiaris
ENSORLG00020014934	mrpl54	85	56.818	ENSCAFG00020018333	MRPL54	70	55.208	Canis_lupus_dingo
ENSORLG00020014934	mrpl54	82	57.647	ENSCHIG00000026538	MRPL54	67	57.609	Capra_hircus
ENSORLG00020014934	mrpl54	91	53.684	ENSCAPG00000012166	MRPL54	100	53.684	Cavia_aperea
ENSORLG00020014934	mrpl54	94	53.061	ENSCPOG00000031082	MRPL54	71	53.061	Cavia_porcellus
ENSORLG00020014934	mrpl54	89	56.989	ENSCCAG00000000138	MRPL54	67	56.989	Cebus_capucinus
ENSORLG00020014934	mrpl54	89	56.989	ENSCATG00000014066	MRPL54	73	56.436	Cercocebus_atys
ENSORLG00020014934	mrpl54	92	54.167	ENSCLAG00000007908	MRPL54	74	53.000	Chinchilla_lanigera
ENSORLG00020014934	mrpl54	89	56.989	ENSCSAG00000010950	MRPL54	73	56.436	Chlorocebus_sabaeus
ENSORLG00020014934	mrpl54	90	56.383	ENSCPBG00000017103	MRPL54	57	54.000	Chrysemys_picta_bellii
ENSORLG00020014934	mrpl54	93	38.144	ENSCING00000019896	-	80	36.842	Ciona_intestinalis
ENSORLG00020014934	mrpl54	89	38.710	ENSCSAVG00000009604	-	66	38.542	Ciona_savignyi
ENSORLG00020014934	mrpl54	89	59.140	ENSCANG00000027841	MRPL54	67	59.140	Colobus_angolensis_palliatus
ENSORLG00020014934	mrpl54	94	55.102	ENSCGRG00001019482	Mrpl54	71	55.102	Cricetulus_griseus_chok1gshd
ENSORLG00020014934	mrpl54	94	55.102	ENSCGRG00000010923	Mrpl54	71	55.102	Cricetulus_griseus_crigri
ENSORLG00020014934	mrpl54	82	71.765	ENSCSEG00000019883	mrpl54	66	71.717	Cynoglossus_semilaevis
ENSORLG00020014934	mrpl54	90	82.979	ENSCVAG00000002210	mrpl54	84	69.231	Cyprinodon_variegatus
ENSORLG00020014934	mrpl54	90	74.468	ENSDARG00000071468	mrpl54	88	62.185	Danio_rerio
ENSORLG00020014934	mrpl54	82	58.824	ENSDNOG00000007387	MRPL54	71	56.122	Dasypus_novemcinctus
ENSORLG00020014934	mrpl54	85	55.682	ENSDORG00000005326	Mrpl54	78	51.923	Dipodomys_ordii
ENSORLG00020014934	mrpl54	75	47.436	FBgn0034579	mRpL54	59	47.436	Drosophila_melanogaster
ENSORLG00020014934	mrpl54	94	51.020	ENSETEG00000017500	MRPL54	73	51.020	Echinops_telfairi
ENSORLG00020014934	mrpl54	89	45.161	ENSEBUG00000003179	mrpl54	80	45.161	Eptatretus_burgeri
ENSORLG00020014934	mrpl54	82	57.647	ENSEASG00005022283	MRPL54	77	51.887	Equus_asinus_asinus
ENSORLG00020014934	mrpl54	82	57.647	ENSECAG00000001515	MRPL54	66	57.143	Equus_caballus
ENSORLG00020014934	mrpl54	80	71.084	ENSELUG00000022358	mrpl54	72	68.000	Esox_lucius
ENSORLG00020014934	mrpl54	85	56.818	ENSFCAG00000007144	MRPL54	70	55.208	Felis_catus
ENSORLG00020014934	mrpl54	92	55.208	ENSFALG00000011660	MRPL54	90	54.639	Ficedula_albicollis
ENSORLG00020014934	mrpl54	94	54.082	ENSFDAG00000020803	MRPL54	71	54.082	Fukomys_damarensis
ENSORLG00020014934	mrpl54	83	58.140	ENSGALG00000027611	MRPL54	83	55.000	Gallus_gallus
ENSORLG00020014934	mrpl54	83	77.907	ENSGAFG00000016193	mrpl54	72	75.000	Gambusia_affinis
ENSORLG00020014934	mrpl54	100	53.846	ENSGAGG00000020238	MRPL54	87	52.252	Gopherus_agassizii
ENSORLG00020014934	mrpl54	89	58.065	ENSGGOG00000014722	MRPL54	67	58.065	Gorilla_gorilla
ENSORLG00020014934	mrpl54	85	79.545	ENSHBUG00000009028	mrpl54	69	69.231	Haplochromis_burtoni
ENSORLG00020014934	mrpl54	100	50.000	ENSHGLG00000006157	MRPL54	78	50.000	Heterocephalus_glaber_female
ENSORLG00020014934	mrpl54	100	50.000	ENSHGLG00100000788	MRPL54	78	50.000	Heterocephalus_glaber_male
ENSORLG00020014934	mrpl54	85	79.545	ENSHCOG00000000536	mrpl54	70	78.000	Hippocampus_comes
ENSORLG00020014934	mrpl54	85	69.318	ENSIPUG00000024854	mrpl54	88	60.163	Ictalurus_punctatus
ENSORLG00020014934	mrpl54	91	55.789	ENSSTOG00000022378	MRPL54	97	55.789	Ictidomys_tridecemlineatus
ENSORLG00020014934	mrpl54	94	54.082	ENSJJAG00000020405	Mrpl54	70	56.250	Jaculus_jaculus
ENSORLG00020014934	mrpl54	91	80.000	ENSKMAG00000022310	mrpl54	71	77.778	Kryptolebias_marmoratus
ENSORLG00020014934	mrpl54	92	79.167	ENSLBEG00000005935	mrpl54	73	78.000	Labrus_bergylta
ENSORLG00020014934	mrpl54	92	62.500	ENSLACG00000013912	MRPL54	81	57.407	Latimeria_chalumnae
ENSORLG00020014934	mrpl54	85	59.091	ENSLOCG00000003860	mrpl54	72	60.000	Lepisosteus_oculatus
ENSORLG00020014934	mrpl54	86	55.056	ENSLAFG00000029657	MRPL54	70	55.670	Loxodonta_africana
ENSORLG00020014934	mrpl54	89	56.989	ENSMFAG00000003311	MRPL54	73	56.436	Macaca_fascicularis
ENSORLG00020014934	mrpl54	89	56.989	ENSMMUG00000044080	MRPL54	73	56.436	Macaca_mulatta
ENSORLG00020014934	mrpl54	89	56.989	ENSMNEG00000039499	MRPL54	73	56.436	Macaca_nemestrina
ENSORLG00020014934	mrpl54	92	78.125	ENSMAMG00000003291	mrpl54	76	77.778	Mastacembelus_armatus
ENSORLG00020014934	mrpl54	85	79.545	ENSMZEG00005009023	mrpl54	69	69.231	Maylandia_zebra
ENSORLG00020014934	mrpl54	91	56.842	ENSMGAG00000000951	MRPL54	98	56.842	Meleagris_gallopavo
ENSORLG00020014934	mrpl54	92	59.375	ENSMAUG00000009543	Mrpl54	77	55.769	Mesocricetus_auratus
ENSORLG00020014934	mrpl54	82	57.647	ENSMICG00000034581	MRPL54	62	53.061	Microcebus_murinus
ENSORLG00020014934	mrpl54	94	56.122	ENSMOCG00000017895	Mrpl54	71	56.122	Microtus_ochrogaster
ENSORLG00020014934	mrpl54	92	76.042	ENSMMOG00000020370	mrpl54	77	76.042	Mola_mola
ENSORLG00020014934	mrpl54	89	56.989	ENSMODG00000000602	MRPL54	73	55.556	Monodelphis_domestica
ENSORLG00020014934	mrpl54	85	79.545	ENSMALG00000020280	mrpl54	72	79.798	Monopterus_albus
ENSORLG00020014934	mrpl54	85	59.091	MGP_CAROLIEiJ_G0015629	Mrpl54	78	54.286	Mus_caroli
ENSORLG00020014934	mrpl54	82	58.824	ENSMUSG00000034932	Mrpl54	78	53.333	Mus_musculus
ENSORLG00020014934	mrpl54	92	55.208	MGP_PahariEiJ_G0031042	Mrpl54	75	56.311	Mus_pahari
ENSORLG00020014934	mrpl54	85	59.091	MGP_SPRETEiJ_G0016447	Mrpl54	78	54.286	Mus_spretus
ENSORLG00020014934	mrpl54	80	61.446	ENSMLUG00000010801	MRPL54	92	56.122	Myotis_lucifugus
ENSORLG00020014934	mrpl54	85	54.545	ENSNGAG00000021044	Mrpl54	78	50.000	Nannospalax_galili
ENSORLG00020014934	mrpl54	85	80.682	ENSNBRG00000000568	mrpl54	85	70.085	Neolamprologus_brichardi
ENSORLG00020014934	mrpl54	96	54.237	ENSMEUG00000013033	MRPL54	88	54.237	Notamacropus_eugenii
ENSORLG00020014934	mrpl54	86	53.933	ENSOPRG00000010035	-	87	45.690	Ochotona_princeps
ENSORLG00020014934	mrpl54	94	51.020	ENSODEG00000013969	MRPL54	71	51.020	Octodon_degus
ENSORLG00020014934	mrpl54	85	79.545	ENSONIG00000002312	mrpl54	75	69.231	Oreochromis_niloticus
ENSORLG00020014934	mrpl54	99	88.991	ENSORLG00000016960	mrpl54	88	88.991	Oryzias_latipes
ENSORLG00020014934	mrpl54	100	89.423	ENSORLG00015010788	mrpl54	75	95.833	Oryzias_latipes_hsok
ENSORLG00020014934	mrpl54	85	81.818	ENSOMEG00000009005	mrpl54	72	81.000	Oryzias_melastigma
ENSORLG00020014934	mrpl54	83	61.628	ENSOGAG00000026254	-	66	62.637	Otolemur_garnettii
ENSORLG00020014934	mrpl54	85	61.364	ENSOGAG00000033519	-	67	62.366	Otolemur_garnettii
ENSORLG00020014934	mrpl54	94	54.082	ENSPPAG00000042418	MRPL54	71	54.082	Pan_paniscus
ENSORLG00020014934	mrpl54	92	58.333	ENSPPRG00000012325	MRPL54	70	58.333	Panthera_pardus
ENSORLG00020014934	mrpl54	85	57.955	ENSPTIG00000017727	MRPL54	68	56.250	Panthera_tigris_altaica
ENSORLG00020014934	mrpl54	94	54.082	ENSPTRG00000010276	MRPL54	71	54.082	Pan_troglodytes
ENSORLG00020014934	mrpl54	89	56.989	ENSPANG00000033944	MRPL54	73	56.436	Papio_anubis
ENSORLG00020014934	mrpl54	92	68.750	ENSPKIG00000009984	mrpl54	58	68.000	Paramormyrops_kingsleyae
ENSORLG00020014934	mrpl54	91	53.684	ENSPSIG00000013587	MRPL54	100	53.684	Pelodiscus_sinensis
ENSORLG00020014934	mrpl54	85	73.864	ENSPMGG00000015972	mrpl54	75	67.544	Periophthalmus_magnuspinnatus
ENSORLG00020014934	mrpl54	94	55.102	ENSPEMG00000022929	Mrpl54	80	50.450	Peromyscus_maniculatus_bairdii
ENSORLG00020014934	mrpl54	89	56.989	ENSPCIG00000025383	MRPL54	80	53.211	Phascolarctos_cinereus
ENSORLG00020014934	mrpl54	90	78.723	ENSPFOG00000007409	mrpl54	72	76.000	Poecilia_formosa
ENSORLG00020014934	mrpl54	90	78.723	ENSPLAG00000001633	mrpl54	72	76.000	Poecilia_latipinna
ENSORLG00020014934	mrpl54	90	78.723	ENSPLAG00000001640	mrpl54	72	76.000	Poecilia_latipinna
ENSORLG00020014934	mrpl54	90	78.723	ENSPMEG00000021068	mrpl54	72	76.000	Poecilia_mexicana
ENSORLG00020014934	mrpl54	90	78.723	ENSPMEG00000021078	mrpl54	72	76.000	Poecilia_mexicana
ENSORLG00020014934	mrpl54	92	77.083	ENSPREG00000012425	mrpl54	72	76.000	Poecilia_reticulata
ENSORLG00020014934	mrpl54	89	59.140	ENSPPYG00000009386	MRPL54	67	59.140	Pongo_abelii
ENSORLG00020014934	mrpl54	94	50.000	ENSPCAG00000000690	MRPL54	80	45.946	Procavia_capensis
ENSORLG00020014934	mrpl54	85	60.227	ENSPCOG00000027550	MRPL54	70	58.333	Propithecus_coquereli
ENSORLG00020014934	mrpl54	83	80.233	ENSPNYG00000022006	mrpl54	69	68.376	Pundamilia_nyererei
ENSORLG00020014934	mrpl54	80	68.675	ENSPNAG00000000077	mrpl54	76	62.264	Pygocentrus_nattereri
ENSORLG00020014934	mrpl54	92	54.167	ENSRNOG00000020464	Mrpl54	76	55.340	Rattus_norvegicus
ENSORLG00020014934	mrpl54	89	59.140	ENSRBIG00000027038	MRPL54	75	58.416	Rhinopithecus_bieti
ENSORLG00020014934	mrpl54	89	59.140	ENSRROG00000018776	MRPL54	75	58.416	Rhinopithecus_roxellana
ENSORLG00020014934	mrpl54	86	56.180	ENSSBOG00000028081	MRPL54	64	56.180	Saimiri_boliviensis_boliviensis
ENSORLG00020014934	mrpl54	83	58.140	ENSSHAG00000002557	MRPL54	79	54.206	Sarcophilus_harrisii
ENSORLG00020014934	mrpl54	86	69.663	ENSSFOG00015008073	mrpl54	90	60.800	Scleropages_formosus
ENSORLG00020014934	mrpl54	85	79.545	ENSSMAG00000009226	mrpl54	83	69.298	Scophthalmus_maximus
ENSORLG00020014934	mrpl54	92	78.125	ENSSDUG00000009545	mrpl54	72	77.000	Seriola_dumerili
ENSORLG00020014934	mrpl54	92	81.250	ENSSLDG00000001781	mrpl54	72	80.000	Seriola_lalandi_dorsalis
ENSORLG00020014934	mrpl54	94	58.163	ENSSPUG00000015361	MRPL54	74	58.163	Sphenodon_punctatus
ENSORLG00020014934	mrpl54	92	70.833	ENSSPAG00000015601	mrpl54	70	70.833	Stegastes_partitus
ENSORLG00020014934	mrpl54	92	70.833	ENSSPAG00000003775	-	70	70.833	Stegastes_partitus
ENSORLG00020014934	mrpl54	86	55.056	ENSSSCG00000024242	MRPL54	71	52.041	Sus_scrofa
ENSORLG00020014934	mrpl54	85	75.000	ENSTRUG00000004609	mrpl54	72	74.747	Takifugu_rubripes
ENSORLG00020014934	mrpl54	85	73.864	ENSTNIG00000015468	mrpl54	72	74.747	Tetraodon_nigroviridis
ENSORLG00020014934	mrpl54	90	55.319	ENSTTRG00000004410	MRPL54	77	50.962	Tursiops_truncatus
ENSORLG00020014934	mrpl54	85	57.955	ENSUAMG00000021572	MRPL54	70	56.250	Ursus_americanus
ENSORLG00020014934	mrpl54	85	57.955	ENSUMAG00000007416	MRPL54	70	56.250	Ursus_maritimus
ENSORLG00020014934	mrpl54	85	56.818	ENSVVUG00000004420	MRPL54	71	54.082	Vulpes_vulpes
ENSORLG00020014934	mrpl54	92	58.333	ENSXETG00000033250	MRPL54	79	55.238	Xenopus_tropicalis
ENSORLG00020014934	mrpl54	83	82.558	ENSXMAG00000003500	mrpl54	72	79.000	Xiphophorus_maculatus