EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020015071 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 11636 bases
Position: chr18:22842900-22854535
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020014075	SnAPC_2_like	PF11035.8	4.8e-77	1	1
ENSORLP00020030532	SnAPC_2_like	PF11035.8	6.9e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020032892	-	1179	-	ENSORLP00020030532	392 (aa)	-	-
ENSORLT00020021745	-	4410	-	ENSORLP00020014075	415 (aa)	-	-

Gene Model

Click here to download ENSORLG00020015071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020015071's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020015071	-	98	32.195	ENSAPOG00000000954	-	100	32.683	Acanthochromis_polyacanthus
ENSORLG00020015071	-	98	30.476	ENSAMEG00000008622	SNAPC2	99	30.476	Ailuropoda_melanoleuca
ENSORLG00020015071	-	60	41.414	ENSACIG00000019919	-	86	42.857	Amphilophus_citrinellus
ENSORLG00020015071	-	98	33.985	ENSAOCG00000013265	-	93	42.065	Amphiprion_ocellaris
ENSORLG00020015071	-	96	46.025	ENSAPEG00000010950	-	99	39.192	Amphiprion_percula
ENSORLG00020015071	-	85	44.843	ENSATEG00000003573	-	70	44.843	Anabas_testudineus
ENSORLG00020015071	-	70	36.913	ENSACAG00000026540	-	87	35.948	Anolis_carolinensis
ENSORLG00020015071	-	98	32.039	ENSANAG00000029939	SNAPC2	99	32.039	Aotus_nancymaae
ENSORLG00020015071	-	65	50.382	ENSACLG00000013092	-	99	39.794	Astatotilapia_calliptera
ENSORLG00020015071	-	98	31.042	ENSAMXG00000038205	snapc2	100	30.067	Astyanax_mexicanus
ENSORLG00020015071	-	97	32.603	ENSBTAG00000014926	SNAPC2	99	32.530	Bos_taurus
ENSORLG00020015071	-	93	33.673	ENSCJAG00000006117	SNAPC2	99	33.976	Callithrix_jacchus
ENSORLG00020015071	-	98	31.961	ENSCAFG00000031676	SNAPC2	99	31.084	Canis_familiaris
ENSORLG00020015071	-	98	31.961	ENSCAFG00020022851	SNAPC2	99	31.084	Canis_lupus_dingo
ENSORLG00020015071	-	86	31.436	ENSTSYG00000037088	SNAPC2	97	31.436	Carlito_syrichta
ENSORLG00020015071	-	84	33.060	ENSCPOG00000034229	SNAPC2	98	32.779	Cavia_porcellus
ENSORLG00020015071	-	93	32.242	ENSCCAG00000034172	SNAPC2	99	32.619	Cebus_capucinus
ENSORLG00020015071	-	93	31.458	ENSCATG00000037131	SNAPC2	99	31.719	Cercocebus_atys
ENSORLG00020015071	-	98	30.861	ENSCLAG00000006885	SNAPC2	98	31.340	Chinchilla_lanigera
ENSORLG00020015071	-	93	32.653	ENSCSAG00000008167	SNAPC2	99	32.530	Chlorocebus_sabaeus
ENSORLG00020015071	-	52	56.452	ENSCPBG00000002277	SNAPC2	54	56.452	Chrysemys_picta_bellii
ENSORLG00020015071	-	93	32.737	ENSCANG00000040525	SNAPC2	99	32.930	Colobus_angolensis_palliatus
ENSORLG00020015071	-	97	33.010	ENSCGRG00001006223	Snapc2	98	32.767	Cricetulus_griseus_chok1gshd
ENSORLG00020015071	-	84	31.686	ENSCGRG00000005622	Snapc2	97	31.988	Cricetulus_griseus_crigri
ENSORLG00020015071	-	80	38.746	ENSCVAG00000011360	-	100	40.816	Cyprinodon_variegatus
ENSORLG00020015071	-	70	39.860	ENSDNOG00000036458	SNAPC2	86	39.860	Dasypus_novemcinctus
ENSORLG00020015071	-	70	39.161	ENSETEG00000012986	SNAPC2	87	39.161	Echinops_telfairi
ENSORLG00020015071	-	98	31.084	ENSEASG00005003809	SNAPC2	99	31.884	Equus_asinus_asinus
ENSORLG00020015071	-	98	31.325	ENSECAG00000011011	SNAPC2	99	31.884	Equus_caballus
ENSORLG00020015071	-	83	34.530	ENSELUG00000010380	-	72	37.705	Esox_lucius
ENSORLG00020015071	-	98	31.643	ENSFCAG00000014945	SNAPC2	99	31.643	Felis_catus
ENSORLG00020015071	-	79	31.962	ENSFDAG00000001564	SNAPC2	90	33.702	Fukomys_damarensis
ENSORLG00020015071	-	52	54.839	ENSGAGG00000015845	SNAPC2	67	30.000	Gopherus_agassizii
ENSORLG00020015071	-	93	30.633	ENSGGOG00000022392	SNAPC2	99	32.850	Gorilla_gorilla
ENSORLG00020015071	-	98	31.915	ENSHGLG00000011707	SNAPC2	99	31.915	Heterocephalus_glaber_female
ENSORLG00020015071	-	85	34.349	ENSHGLG00100003422	SNAPC2	88	34.349	Heterocephalus_glaber_male
ENSORLG00020015071	-	99	36.038	ENSHCOG00000002795	-	99	36.580	Hippocampus_comes
ENSORLG00020015071	-	70	40.714	ENSSTOG00000009102	SNAPC2	87	40.714	Ictidomys_tridecemlineatus
ENSORLG00020015071	-	98	39.323	ENSKMAG00000007231	-	99	40.299	Kryptolebias_marmoratus
ENSORLG00020015071	-	64	45.614	ENSLBEG00000009986	-	96	31.783	Labrus_bergylta
ENSORLG00020015071	-	98	31.166	ENSLOCG00000014065	snapc2	99	31.390	Lepisosteus_oculatus
ENSORLG00020015071	-	93	32.398	ENSMFAG00000034273	SNAPC2	99	32.289	Macaca_fascicularis
ENSORLG00020015071	-	93	32.398	ENSMMUG00000006540	SNAPC2	99	32.653	Macaca_mulatta
ENSORLG00020015071	-	93	32.143	ENSMNEG00000039547	SNAPC2	99	32.367	Macaca_nemestrina
ENSORLG00020015071	-	93	31.888	ENSMLEG00000031059	SNAPC2	99	32.126	Mandrillus_leucophaeus
ENSORLG00020015071	-	86	47.917	ENSMAMG00000018195	-	99	44.105	Mastacembelus_armatus
ENSORLG00020015071	-	68	71.667	ENSMZEG00005009488	-	99	39.666	Maylandia_zebra
ENSORLG00020015071	-	98	33.413	ENSMICG00000035695	SNAPC2	99	33.252	Microcebus_murinus
ENSORLG00020015071	-	97	31.553	ENSMOCG00000019080	Snapc2	98	31.553	Microtus_ochrogaster
ENSORLG00020015071	-	79	34.682	ENSMMOG00000020608	-	86	35.556	Mola_mola
ENSORLG00020015071	-	98	36.740	ENSMALG00000002335	-	100	36.496	Monopterus_albus
ENSORLG00020015071	-	55	30.568	ENSMUSG00000011837	Snapc2	86	30.568	Mus_musculus
ENSORLG00020015071	-	98	30.476	ENSMPUG00000008010	SNAPC2	99	31.311	Mustela_putorius_furo
ENSORLG00020015071	-	79	49.231	ENSNBRG00000003764	-	99	34.951	Neolamprologus_brichardi
ENSORLG00020015071	-	64	42.446	ENSNLEG00000001250	SNAPC2	99	31.235	Nomascus_leucogenys
ENSORLG00020015071	-	69	38.686	ENSMEUG00000014367	SNAPC2	81	36.957	Notamacropus_eugenii
ENSORLG00020015071	-	99	30.824	ENSODEG00000011415	SNAPC2	99	30.189	Octodon_degus
ENSORLG00020015071	-	52	69.841	ENSONIG00000002078	-	99	45.210	Oreochromis_niloticus
ENSORLG00020015071	-	100	95.694	ENSORLG00000010375	-	83	95.694	Oryzias_latipes
ENSORLG00020015071	-	100	88.030	ENSORLG00015016075	-	100	88.030	Oryzias_latipes_hsok
ENSORLG00020015071	-	99	67.299	ENSOMEG00000003040	snapc2	98	68.333	Oryzias_melastigma
ENSORLG00020015071	-	69	40.000	ENSOGAG00000012870	SNAPC2	87	40.000	Otolemur_garnettii
ENSORLG00020015071	-	84	32.749	ENSOARG00000003045	SNAPC2	99	33.140	Ovis_aries
ENSORLG00020015071	-	64	42.446	ENSPPAG00000032460	SNAPC2	99	30.508	Pan_paniscus
ENSORLG00020015071	-	98	31.159	ENSPPRG00000003265	SNAPC2	99	31.159	Panthera_pardus
ENSORLG00020015071	-	93	30.127	ENSPTRG00000042034	SNAPC2	99	31.477	Pan_troglodytes
ENSORLG00020015071	-	93	32.398	ENSPANG00000025882	SNAPC2	99	32.609	Papio_anubis
ENSORLG00020015071	-	81	31.395	ENSPKIG00000000084	snapc2	63	31.395	Paramormyrops_kingsleyae
ENSORLG00020015071	-	98	30.993	ENSPEMG00000009767	Snapc2	98	30.993	Peromyscus_maniculatus_bairdii
ENSORLG00020015071	-	99	39.903	ENSPFOG00000012045	-	99	39.741	Poecilia_formosa
ENSORLG00020015071	-	98	39.787	ENSPLAG00000018873	-	99	42.424	Poecilia_latipinna
ENSORLG00020015071	-	98	39.787	ENSPMEG00000002270	-	99	43.182	Poecilia_mexicana
ENSORLG00020015071	-	98	39.785	ENSPREG00000003140	-	99	39.785	Poecilia_reticulata
ENSORLG00020015071	-	93	32.225	ENSPPYG00000009494	SNAPC2	99	32.688	Pongo_abelii
ENSORLG00020015071	-	68	39.726	ENSPCOG00000026672	SNAPC2	99	30.244	Propithecus_coquereli
ENSORLG00020015071	-	98	30.223	ENSPNAG00000020947	snapc2	99	30.426	Pygocentrus_nattereri
ENSORLG00020015071	-	97	33.985	ENSRNOG00000001056	Snapc2	98	33.985	Rattus_norvegicus
ENSORLG00020015071	-	93	32.737	ENSRBIG00000044314	SNAPC2	99	32.930	Rhinopithecus_bieti
ENSORLG00020015071	-	93	32.737	ENSRROG00000043480	SNAPC2	99	32.930	Rhinopithecus_roxellana
ENSORLG00020015071	-	93	32.821	ENSSBOG00000011587	SNAPC2	99	33.172	Saimiri_boliviensis_boliviensis
ENSORLG00020015071	-	82	32.718	ENSSFOG00015010693	snapc2	67	34.794	Scleropages_formosus
ENSORLG00020015071	-	90	46.914	ENSSMAG00000009095	-	96	50.000	Scophthalmus_maximus
ENSORLG00020015071	-	90	45.833	ENSSDUG00000016949	-	100	35.407	Seriola_dumerili
ENSORLG00020015071	-	55	41.296	ENSSLDG00000006093	-	75	41.296	Seriola_lalandi_dorsalis
ENSORLG00020015071	-	78	31.056	ENSSARG00000012954	SNAPC2	72	31.746	Sorex_araneus
ENSORLG00020015071	-	84	37.130	ENSSPAG00000008637	-	97	39.713	Stegastes_partitus
ENSORLG00020015071	-	98	31.796	ENSSSCG00000013589	SNAPC2	99	31.796	Sus_scrofa
ENSORLG00020015071	-	83	34.111	ENSTRUG00000005122	-	100	36.337	Takifugu_rubripes
ENSORLG00020015071	-	98	30.193	ENSTTRG00000010165	SNAPC2	99	30.193	Tursiops_truncatus
ENSORLG00020015071	-	98	30.340	ENSUAMG00000021489	SNAPC2	99	30.340	Ursus_americanus
ENSORLG00020015071	-	98	31.592	ENSVVUG00000026998	SNAPC2	99	31.343	Vulpes_vulpes
ENSORLG00020015071	-	98	41.401	ENSXMAG00000027683	-	99	41.542	Xiphophorus_maculatus