EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00020015284 (Gene tree)
Gene ID
-
Gene Symbol
RPA1 (1 of many)
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Oryzias_latipes_hni
Status
putative
Strand
Minus strand
Length
40962 bases
Position
chr14:7959205-8000166
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00020030680tRNA_anti-codonPF01336.251.6e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00020022051RPA1 (1 of many)-2013986-ENSORLP00020030680667 (aa)--
Gene Model
Click here to download ENSORLG00020015284's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020015284's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00020015284RPA19955.438ENSORLG00020008980rpa19955.438
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00020015284RPA18567.713ENSAPOG00000011658rpa19567.713Acanthochromis_polyacanthus
ENSORLG00020015284RPA19973.478ENSAPOG00000019409RPA19973.266Acanthochromis_polyacanthus
ENSORLG00020015284RPA19752.623ENSAMEG00000007706RPA19652.623Ailuropoda_melanoleuca
ENSORLG00020015284RPA18755.297ENSACIG00000007277rpa19955.297Amphilophus_citrinellus
ENSORLG00020015284RPA19673.913ENSACIG00000012881RPA19973.913Amphilophus_citrinellus
ENSORLG00020015284RPA19764.407ENSAOCG00000023376rpa19964.407Amphiprion_ocellaris
ENSORLG00020015284RPA19974.146ENSAOCG00000009003RPA19974.146Amphiprion_ocellaris
ENSORLG00020015284RPA19975.632ENSAPEG00000019132RPA19975.632Amphiprion_percula
ENSORLG00020015284RPA19764.831ENSAPEG00000008634rpa19964.831Amphiprion_percula
ENSORLG00020015284RPA19973.185ENSATEG00000006443RPA19973.185Anabas_testudineus
ENSORLG00020015284RPA18167.040ENSATEG00000022024rpa19567.040Anabas_testudineus
ENSORLG00020015284RPA19452.985ENSAPLG00000012442RPA110047.131Anas_platyrhynchos
ENSORLG00020015284RPA18458.186ENSACAG00000014490RPA19955.172Anolis_carolinensis
ENSORLG00020015284RPA19752.705ENSANAG00000023456RPA19861.438Aotus_nancymaae
ENSORLG00020015284RPA19973.582ENSACLG00000005223RPA19973.582Astatotilapia_calliptera
ENSORLG00020015284RPA17968.000ENSACLG00000006640rpa19468.000Astatotilapia_calliptera
ENSORLG00020015284RPA18766.595ENSAMXG00000008418rpa19966.379Astyanax_mexicanus
ENSORLG00020015284RPA19952.632ENSBTAG00000009711RPA19952.632Bos_taurus
ENSORLG00020015284RPA16630.045WBGene00017546rpa-16730.045Caenorhabditis_elegans
ENSORLG00020015284RPA18462.780ENSCJAG00000001848RPA19952.252Callithrix_jacchus
ENSORLG00020015284RPA19952.331ENSCAFG00000019249RPA19952.481Canis_familiaris
ENSORLG00020015284RPA19952.331ENSCAFG00020009847RPA19952.481Canis_lupus_dingo
ENSORLG00020015284RPA18860.042ENSCHIG00000026308RPA19952.331Capra_hircus
ENSORLG00020015284RPA19951.952ENSTSYG00000003482-9951.952Carlito_syrichta
ENSORLG00020015284RPA19951.868ENSCPOG00000000035RPA19951.868Cavia_porcellus
ENSORLG00020015284RPA18351.826ENSCCAG00000010981RPA19944.361Cebus_capucinus
ENSORLG00020015284RPA19953.363ENSCLAG00000005185-9953.363Chinchilla_lanigera
ENSORLG00020015284RPA19950.000ENSCLAG00000015045-9950.000Chinchilla_lanigera
ENSORLG00020015284RPA18450.897ENSCSAG00000013833RPA19943.759Chlorocebus_sabaeus
ENSORLG00020015284RPA16464.583ENSCHOG00000009454-9864.583Choloepus_hoffmanni
ENSORLG00020015284RPA19653.115ENSCHOG00000013540-9953.115Choloepus_hoffmanni
ENSORLG00020015284RPA19952.545ENSCPBG00000020377RPA19953.526Chrysemys_picta_bellii
ENSORLG00020015284RPA19048.380ENSCING00000023482-9948.380Ciona_intestinalis
ENSORLG00020015284RPA18662.556ENSCANG00000030911RPA19862.556Colobus_angolensis_palliatus
ENSORLG00020015284RPA19952.932ENSCGRG00001008197Rpa19952.932Cricetulus_griseus_chok1gshd
ENSORLG00020015284RPA16663.098ENSCGRG00000000582Rpa18663.098Cricetulus_griseus_crigri
ENSORLG00020015284RPA19955.438ENSCSEG00000013066rpa19264.978Cynoglossus_semilaevis
ENSORLG00020015284RPA19963.814ENSCSEG00000012726RPA19964.469Cynoglossus_semilaevis
ENSORLG00020015284RPA19953.474ENSCVAG00000019431rpa19565.854Cyprinodon_variegatus
ENSORLG00020015284RPA19673.700ENSCVAG00000013446-9673.700Cyprinodon_variegatus
ENSORLG00020015284RPA19956.907ENSDARG00000003938rpa19956.907Danio_rerio
ENSORLG00020015284RPA19953.323ENSDNOG00000017218RPA19853.323Dasypus_novemcinctus
ENSORLG00020015284RPA19954.054ENSDORG00000006199Rpa19954.054Dipodomys_ordii
ENSORLG00020015284RPA18344.118FBgn0010173RpA-709844.206Drosophila_melanogaster
ENSORLG00020015284RPA18566.327ENSETEG00000017608RPA18366.327Echinops_telfairi
ENSORLG00020015284RPA19653.023ENSEASG00005009372RPA19962.556Equus_asinus_asinus
ENSORLG00020015284RPA19952.180ENSECAG00000023886RPA19952.180Equus_caballus
ENSORLG00020015284RPA16263.876ENSEEUG00000002186-6863.876Erinaceus_europaeus
ENSORLG00020015284RPA16371.223ENSELUG00000006136RPA19271.223Esox_lucius
ENSORLG00020015284RPA19956.822ENSELUG00000021071rpa19956.822Esox_lucius
ENSORLG00020015284RPA19952.331ENSFCAG00000006306RPA19952.331Felis_catus
ENSORLG00020015284RPA19951.194ENSFALG00000006575RPA19951.194Ficedula_albicollis
ENSORLG00020015284RPA19952.765ENSFDAG00000007720RPA19952.765Fukomys_damarensis
ENSORLG00020015284RPA19953.916ENSFHEG00000003580rpa19953.916Fundulus_heteroclitus
ENSORLG00020015284RPA19263.848ENSGMOG00000010382rpa19963.713Gadus_morhua
ENSORLG00020015284RPA19951.946ENSGALG00000003072RPA19951.946Gallus_gallus
ENSORLG00020015284RPA19973.433ENSGAFG00000020953RPA19974.179Gambusia_affinis
ENSORLG00020015284RPA19955.505ENSGAFG00000012916rpa19168.140Gambusia_affinis
ENSORLG00020015284RPA19366.368ENSGACG00000010856rpa19966.368Gasterosteus_aculeatus
ENSORLG00020015284RPA19952.844ENSGAGG00000013611RPA19952.844Gopherus_agassizii
ENSORLG00020015284RPA18863.470ENSGGOG00000014186RPA19963.470Gorilla_gorilla
ENSORLG00020015284RPA18767.778ENSHBUG00000017773rpa19667.778Haplochromis_burtoni
ENSORLG00020015284RPA18171.333ENSHBUG00000009348RPA19471.333Haplochromis_burtoni
ENSORLG00020015284RPA18563.677ENSHGLG00000008846RPA110052.915Heterocephalus_glaber_female
ENSORLG00020015284RPA18554.607ENSHGLG00100002005-9944.880Heterocephalus_glaber_male
ENSORLG00020015284RPA18563.677ENSHGLG00100017755-10052.915Heterocephalus_glaber_male
ENSORLG00020015284RPA19949.477ENSHGLG00100000799-9949.477Heterocephalus_glaber_male
ENSORLG00020015284RPA18556.440ENSHCOG00000000351RPA19856.440Hippocampus_comes
ENSORLG00020015284RPA18462.955ENSHCOG00000001401rpa19952.640Hippocampus_comes
ENSORLG00020015284RPA19956.907ENSIPUG00000004400rpa19956.907Ictalurus_punctatus
ENSORLG00020015284RPA19750.460ENSSTOG00000022475RPA19950.460Ictidomys_tridecemlineatus
ENSORLG00020015284RPA19653.416ENSJJAG00000000876Rpa19853.416Jaculus_jaculus
ENSORLG00020015284RPA18666.150ENSKMAG00000005605rpa19955.838Kryptolebias_marmoratus
ENSORLG00020015284RPA19969.865ENSKMAG00000000234RPA19970.165Kryptolebias_marmoratus
ENSORLG00020015284RPA19955.053ENSLBEG00000021604rpa19966.063Labrus_bergylta
ENSORLG00020015284RPA19967.518ENSLBEG00000002281RPA19967.518Labrus_bergylta
ENSORLG00020015284RPA17254.786ENSLACG00000007210RPA19954.786Latimeria_chalumnae
ENSORLG00020015284RPA19955.838ENSLOCG00000006397rpa19955.988Lepisosteus_oculatus
ENSORLG00020015284RPA19753.632ENSLAFG00000015354RPA19951.023Loxodonta_africana
ENSORLG00020015284RPA16761.605ENSMFAG00000036138-9849.818Macaca_fascicularis
ENSORLG00020015284RPA19948.120ENSMMUG00000002442-9948.120Macaca_mulatta
ENSORLG00020015284RPA18462.332ENSMMUG00000011604-9951.511Macaca_mulatta
ENSORLG00020015284RPA17758.482ENSMNEG00000029837-9558.482Macaca_nemestrina
ENSORLG00020015284RPA18161.659ENSMNEG00000031632-9851.322Macaca_nemestrina
ENSORLG00020015284RPA18160.090ENSMLEG00000038768-9849.768Mandrillus_leucophaeus
ENSORLG00020015284RPA110073.499ENSMAMG00000020097RPA110073.862Mastacembelus_armatus
ENSORLG00020015284RPA19954.079ENSMAMG00000017993rpa19964.130Mastacembelus_armatus
ENSORLG00020015284RPA18767.778ENSMZEG00005007551rpa19667.778Maylandia_zebra
ENSORLG00020015284RPA19973.582ENSMZEG00005024731RPA19973.582Maylandia_zebra
ENSORLG00020015284RPA19951.437ENSMGAG00000005315RPA19851.437Meleagris_gallopavo
ENSORLG00020015284RPA18063.554ENSMAUG00000010474Rpa19853.096Mesocricetus_auratus
ENSORLG00020015284RPA18463.953ENSMICG00000012867RPA19952.108Microcebus_murinus
ENSORLG00020015284RPA19952.096ENSMOCG00000013019Rpa19952.096Microtus_ochrogaster
ENSORLG00020015284RPA19953.474ENSMMOG00000014292rpa19954.503Mola_mola
ENSORLG00020015284RPA19967.884ENSMMOG00000010868RPA19682.254Mola_mola
ENSORLG00020015284RPA19952.317ENSMODG00000010549RPA19952.317Monodelphis_domestica
ENSORLG00020015284RPA19968.377ENSMALG00000001208RPA19968.377Monopterus_albus
ENSORLG00020015284RPA19954.848ENSMALG00000011453rpa19367.150Monopterus_albus
ENSORLG00020015284RPA19952.489MGP_CAROLIEiJ_G0016734Rpa19952.711Mus_caroli
ENSORLG00020015284RPA19952.632ENSMUSG00000000751Rpa19952.632Mus_musculus
ENSORLG00020015284RPA19952.790MGP_PahariEiJ_G0017871Rpa19952.790Mus_pahari
ENSORLG00020015284RPA19952.560MGP_SPRETEiJ_G0017577Rpa19952.695Mus_spretus
ENSORLG00020015284RPA19951.729ENSMPUG00000013119RPA19951.729Mustela_putorius_furo
ENSORLG00020015284RPA19753.549ENSMLUG00000006113RPA19553.549Myotis_lucifugus
ENSORLG00020015284RPA19653.427ENSNGAG00000004522Rpa19453.427Nannospalax_galili
ENSORLG00020015284RPA19965.611ENSNBRG00000009672RPA19765.611Neolamprologus_brichardi
ENSORLG00020015284RPA18067.556ENSNBRG00000020595rpa19467.556Neolamprologus_brichardi
ENSORLG00020015284RPA18363.470ENSNLEG00000017149RPA19951.579Nomascus_leucogenys
ENSORLG00020015284RPA19745.679ENSMEUG00000006714RPA19845.679Notamacropus_eugenii
ENSORLG00020015284RPA19654.432ENSODEG00000009038RPA19654.432Octodon_degus
ENSORLG00020015284RPA19956.344ENSONIG00000013135rpa19956.344Oreochromis_niloticus
ENSORLG00020015284RPA19753.077ENSOANG00000010880RPA19853.231Ornithorhynchus_anatinus
ENSORLG00020015284RPA19950.727ENSOCUG00000001504RPA19950.727Oryctolagus_cuniculus
ENSORLG00020015284RPA19955.287ENSORLG00000004856rpa19955.287Oryzias_latipes
ENSORLG00020015284RPA110097.001ENSORLG00000003368RPA110097.301Oryzias_latipes
ENSORLG00020015284RPA16597.680ENSORLG00015005867-9997.680Oryzias_latipes_hsok
ENSORLG00020015284RPA19955.438ENSORLG00015013982rpa19955.438Oryzias_latipes_hsok
ENSORLG00020015284RPA110094.753ENSORLG00015020383RPA110095.052Oryzias_latipes_hsok
ENSORLG00020015284RPA19979.429ENSOMEG00000011040RPA19881.026Oryzias_melastigma
ENSORLG00020015284RPA19954.381ENSOMEG00000004704rpa19862.415Oryzias_melastigma
ENSORLG00020015284RPA19449.320ENSOGAG00000029379-9949.320Otolemur_garnettii
ENSORLG00020015284RPA19952.481ENSOGAG00000005581-9952.481Otolemur_garnettii
ENSORLG00020015284RPA18860.042ENSOARG00000014479RPA19952.331Ovis_aries
ENSORLG00020015284RPA18363.699ENSPPAG00000039680RPA19952.030Pan_paniscus
ENSORLG00020015284RPA19952.167ENSPPRG00000011807RPA19952.167Panthera_pardus
ENSORLG00020015284RPA19952.331ENSPTIG00000007898RPA19952.331Panthera_tigris_altaica
ENSORLG00020015284RPA18363.470ENSPTRG00000008539RPA19951.579Pan_troglodytes
ENSORLG00020015284RPA18462.332ENSPANG00000024592RPA19951.429Papio_anubis
ENSORLG00020015284RPA18068.510ENSPKIG00000008053rpa19456.918Paramormyrops_kingsleyae
ENSORLG00020015284RPA19752.241ENSPSIG00000015617RPA19852.241Pelodiscus_sinensis
ENSORLG00020015284RPA18368.254ENSPMGG00000011589rpa19568.254Periophthalmus_magnuspinnatus
ENSORLG00020015284RPA19276.805ENSPMGG00000000543RPA19976.805Periophthalmus_magnuspinnatus
ENSORLG00020015284RPA19952.187ENSPEMG00000021061Rpa19952.187Peromyscus_maniculatus_bairdii
ENSORLG00020015284RPA18364.073ENSPCIG00000019049RPA19952.167Phascolarctos_cinereus
ENSORLG00020015284RPA19953.394ENSPFOG00000003987rpa19166.977Poecilia_formosa
ENSORLG00020015284RPA19953.695ENSPLAG00000004984rpa19953.695Poecilia_latipinna
ENSORLG00020015284RPA19572.727ENSPLAG00000008844-9772.571Poecilia_latipinna
ENSORLG00020015284RPA19953.394ENSPMEG00000020602rpa19465.188Poecilia_mexicana
ENSORLG00020015284RPA19572.100ENSPMEG00000003627-9772.884Poecilia_mexicana
ENSORLG00020015284RPA19973.196ENSPREG00000010119RPA110072.994Poecilia_reticulata
ENSORLG00020015284RPA19746.851ENSPREG00000010174rpa19946.851Poecilia_reticulata
ENSORLG00020015284RPA19951.946ENSPCOG00000001799RPA19951.946Propithecus_coquereli
ENSORLG00020015284RPA19951.570ENSPVAG00000002149RPA19951.570Pteropus_vampyrus
ENSORLG00020015284RPA18768.000ENSPNYG00000016316rpa19668.000Pundamilia_nyererei
ENSORLG00020015284RPA19973.582ENSPNYG00000024165RPA19973.582Pundamilia_nyererei
ENSORLG00020015284RPA110048.820ENSPNAG00000008599rpa19656.604Pygocentrus_nattereri
ENSORLG00020015284RPA18363.098ENSRNOG00000003123Rpa19953.092Rattus_norvegicus
ENSORLG00020015284RPA19951.271ENSRBIG00000036587RPA19951.271Rhinopithecus_bieti
ENSORLG00020015284RPA19948.281ENSRROG00000043278RPA19948.281Rhinopithecus_roxellana
ENSORLG00020015284RPA16635.045YAR007CRFA17235.045Saccharomyces_cerevisiae
ENSORLG00020015284RPA17662.780ENSSBOG00000030233RPA19752.443Saimiri_boliviensis_boliviensis
ENSORLG00020015284RPA18660.125ENSSHAG00000007969RPA19553.478Sarcophilus_harrisii
ENSORLG00020015284RPA19865.895ENSSFOG00015005362rpa19265.895Scleropages_formosus
ENSORLG00020015284RPA19974.146ENSSMAG00000019746RPA19974.405Scophthalmus_maximus
ENSORLG00020015284RPA19763.771ENSSDUG00000011949rpa19963.771Seriola_dumerili
ENSORLG00020015284RPA19973.295ENSSDUG00000016358RPA19973.295Seriola_dumerili
ENSORLG00020015284RPA19972.334ENSSLDG00000020784RPA19972.543Seriola_lalandi_dorsalis
ENSORLG00020015284RPA19163.983ENSSLDG00000011806rpa19963.983Seriola_lalandi_dorsalis
ENSORLG00020015284RPA18771.875ENSSARG00000007506RPA18771.875Sorex_araneus
ENSORLG00020015284RPA19751.932ENSSPUG00000007223RPA19851.932Sphenodon_punctatus
ENSORLG00020015284RPA19868.902ENSSPAG00000011165RPA19869.512Stegastes_partitus
ENSORLG00020015284RPA19954.532ENSSPAG00000009903rpa19954.532Stegastes_partitus
ENSORLG00020015284RPA18861.947ENSSSCG00000017822RPA19961.947Sus_scrofa
ENSORLG00020015284RPA19951.647ENSTGUG00000005775RPA19951.647Taeniopygia_guttata
ENSORLG00020015284RPA19966.435ENSTRUG00000000405RPA19967.039Takifugu_rubripes
ENSORLG00020015284RPA19955.438ENSTRUG00000003616rpa19955.438Takifugu_rubripes
ENSORLG00020015284RPA19956.863ENSTNIG00000016199rpa19957.014Tetraodon_nigroviridis
ENSORLG00020015284RPA16562.785ENSTBEG00000002709RPA17362.785Tupaia_belangeri
ENSORLG00020015284RPA18462.332ENSTTRG00000001169RPA19952.180Tursiops_truncatus
ENSORLG00020015284RPA17673.077ENSUAMG00000015676RPA19573.077Ursus_americanus
ENSORLG00020015284RPA18763.004ENSUMAG00000009328RPA19963.004Ursus_maritimus
ENSORLG00020015284RPA19950.983ENSVPAG00000009443RPA19950.983Vicugna_pacos
ENSORLG00020015284RPA19952.331ENSVVUG00000021715RPA19952.474Vulpes_vulpes
ENSORLG00020015284RPA19364.270ENSXETG00000013538rpa19953.916Xenopus_tropicalis
ENSORLG00020015284RPA19668.799ENSXCOG00000009899-9968.955Xiphophorus_couchianus
ENSORLG00020015284RPA18462.727ENSXCOG00000010068rpa19462.727Xiphophorus_couchianus
ENSORLG00020015284RPA19955.053ENSXMAG00000004102rpa19955.377Xiphophorus_maculatus
ENSORLG00020015284RPA19970.597ENSXMAG00000010333RPA19971.307Xiphophorus_maculatus

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