EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020015515 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 8257 bases
Position: chr11:10194078-10202334
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020030813	DEAD	PF00270.29	7.7e-41	1	1
ENSORLP00020030803	DEAD	PF00270.29	9.2e-26	1	2
ENSORLP00020030803	DEAD	PF00270.29	9.2e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020022257	-	6751	-	ENSORLP00020030813	486 (aa)	-	-
ENSORLT00020022239	-	1314	-	ENSORLP00020030803	437 (aa)	-	-

Gene Model

Click here to download ENSORLG00020015515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020015515's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020015515	-	76	39.516	ENSORLG00020014611	eif4a1b	92	39.516
ENSORLG00020015515	-	71	32.676	ENSORLG00020018592	ddx43	54	32.676
ENSORLG00020015515	-	85	30.233	ENSORLG00020008743	ddx24	51	30.233
ENSORLG00020015515	-	66	31.003	ENSORLG00020022308	ddx18	51	31.003
ENSORLG00020015515	-	75	35.620	ENSORLG00020013770	ddx19	80	35.620
ENSORLG00020015515	-	81	35.338	ENSORLG00020019315	ddx39aa	93	35.338
ENSORLG00020015515	-	71	36.620	ENSORLG00020008587	zgc:193690	73	36.620
ENSORLG00020015515	-	68	32.743	ENSORLG00020007089	-	60	31.606
ENSORLG00020015515	-	81	35.589	ENSORLG00020004181	DDX39A	93	35.589
ENSORLG00020015515	-	99	80.903	ENSORLG00020016534	ddx6	100	81.020
ENSORLG00020015515	-	76	40.323	ENSORLG00020012834	eif4a2	90	40.323
ENSORLG00020015515	-	72	32.778	ENSORLG00020021743	si:dkey-156n14.5	55	32.778
ENSORLG00020015515	-	69	45.098	ENSORLG00020003290	ddx1	59	45.098
ENSORLG00020015515	-	72	38.889	ENSORLG00020008144	-	63	31.899
ENSORLG00020015515	-	74	31.311	ENSORLG00020017586	ddx23	52	31.311
ENSORLG00020015515	-	78	30.287	ENSORLG00020005546	ddx47	87	30.287
ENSORLG00020015515	-	73	30.163	ENSORLG00020008411	DDX41	59	30.163
ENSORLG00020015515	-	80	33.920	ENSORLG00020003852	ddx20	53	33.920
ENSORLG00020015515	-	78	30.100	ENSORLG00020014206	ddx4	64	30.100
ENSORLG00020015515	-	75	31.818	ENSORLG00020014661	ddx49	80	31.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020015515	-	77	95.200	ENSAPOG00000023627	-	95	95.200	Acanthochromis_polyacanthus
ENSORLG00020015515	-	99	85.361	ENSAPOG00000014829	ddx61	99	85.361	Acanthochromis_polyacanthus
ENSORLG00020015515	-	100	86.858	ENSACIG00000018355	-	100	86.858	Amphilophus_citrinellus
ENSORLG00020015515	-	100	93.661	ENSAOCG00000006269	-	100	93.661	Amphiprion_ocellaris
ENSORLG00020015515	-	99	86.598	ENSAOCG00000007627	ddx61	99	86.598	Amphiprion_ocellaris
ENSORLG00020015515	-	100	93.661	ENSAPEG00000020642	-	100	93.661	Amphiprion_percula
ENSORLG00020015515	-	99	86.598	ENSAPEG00000007293	ddx61	99	86.598	Amphiprion_percula
ENSORLG00020015515	-	100	93.661	ENSAPEG00000021368	-	100	93.661	Amphiprion_percula
ENSORLG00020015515	-	98	85.595	ENSATEG00000011302	ddx61	99	85.595	Anabas_testudineus
ENSORLG00020015515	-	100	92.025	ENSATEG00000005424	-	100	92.025	Anabas_testudineus
ENSORLG00020015515	-	98	86.639	ENSACLG00000027620	ddx61	99	86.639	Astatotilapia_calliptera
ENSORLG00020015515	-	100	93.429	ENSACLG00000003260	-	100	93.429	Astatotilapia_calliptera
ENSORLG00020015515	-	98	88.150	ENSAMXG00000033980	-	97	88.150	Astyanax_mexicanus
ENSORLG00020015515	-	97	86.345	ENSAMXG00000032542	ddx61	99	84.805	Astyanax_mexicanus
ENSORLG00020015515	-	100	91.411	ENSCSEG00000009893	-	100	91.411	Cynoglossus_semilaevis
ENSORLG00020015515	-	100	90.249	ENSCVAG00000011006	-	100	90.249	Cyprinodon_variegatus
ENSORLG00020015515	-	97	86.441	ENSDARG00000018425	ddx61	98	86.441	Danio_rerio
ENSORLG00020015515	-	98	88.935	ENSELUG00000020545	ddx61	98	88.935	Esox_lucius
ENSORLG00020015515	-	98	88.797	ENSELUG00000022538	-	98	88.797	Esox_lucius
ENSORLG00020015515	-	100	90.184	ENSFHEG00000015487	-	100	90.184	Fundulus_heteroclitus
ENSORLG00020015515	-	96	88.421	ENSGMOG00000013762	ddx61	99	87.397	Gadus_morhua
ENSORLG00020015515	-	66	86.544	ENSGMOG00000003561	-	100	87.538	Gadus_morhua
ENSORLG00020015515	-	100	90.816	ENSGAFG00000015865	-	100	90.816	Gambusia_affinis
ENSORLG00020015515	-	99	92.324	ENSGACG00000002413	-	99	92.324	Gasterosteus_aculeatus
ENSORLG00020015515	-	99	85.185	ENSGACG00000003401	ddx61	100	85.185	Gasterosteus_aculeatus
ENSORLG00020015515	-	98	86.848	ENSHBUG00000017832	ddx61	99	86.848	Haplochromis_burtoni
ENSORLG00020015515	-	100	93.429	ENSHBUG00000017033	-	100	93.429	Haplochromis_burtoni
ENSORLG00020015515	-	97	83.544	ENSHCOG00000008184	ddx61	97	83.544	Hippocampus_comes
ENSORLG00020015515	-	100	88.344	ENSHCOG00000012238	-	100	88.344	Hippocampus_comes
ENSORLG00020015515	-	96	85.470	ENSIPUG00000012823	DDX6	97	85.470	Ictalurus_punctatus
ENSORLG00020015515	-	99	86.722	ENSIPUG00000008367	-	99	86.722	Ictalurus_punctatus
ENSORLG00020015515	-	100	93.827	ENSKMAG00000007213	-	100	93.827	Kryptolebias_marmoratus
ENSORLG00020015515	-	100	91.734	ENSLBEG00000016890	-	100	91.734	Labrus_bergylta
ENSORLG00020015515	-	98	85.565	ENSLBEG00000001740	ddx61	99	85.565	Labrus_bergylta
ENSORLG00020015515	-	98	84.711	ENSLACG00000015214	ddx61	100	84.711	Latimeria_chalumnae
ENSORLG00020015515	-	98	51.259	ENSLOCG00000004352	ddx61	98	51.487	Lepisosteus_oculatus
ENSORLG00020015515	-	100	92.857	ENSMAMG00000005559	-	100	92.857	Mastacembelus_armatus
ENSORLG00020015515	-	99	85.773	ENSMAMG00000005321	ddx61	99	85.773	Mastacembelus_armatus
ENSORLG00020015515	-	98	86.848	ENSMZEG00005003556	ddx61	99	86.848	Maylandia_zebra
ENSORLG00020015515	-	100	93.429	ENSMZEG00005026268	-	100	93.429	Maylandia_zebra
ENSORLG00020015515	-	96	86.141	ENSMMOG00000007415	ddx61	97	86.141	Mola_mola
ENSORLG00020015515	-	73	76.204	ENSMMOG00000008825	-	92	76.204	Mola_mola
ENSORLG00020015515	-	100	92.500	ENSMMOG00000013694	-	100	92.500	Mola_mola
ENSORLG00020015515	-	98	75.783	ENSMALG00000013776	ddx61	96	75.783	Monopterus_albus
ENSORLG00020015515	-	100	92.434	ENSMALG00000013817	-	100	92.434	Monopterus_albus
ENSORLG00020015515	-	100	86.858	ENSNBRG00000015075	-	100	86.858	Neolamprologus_brichardi
ENSORLG00020015515	-	98	79.707	ENSNBRG00000015800	ddx61	99	79.707	Neolamprologus_brichardi
ENSORLG00020015515	-	98	86.848	ENSONIG00000011418	ddx61	99	86.848	Oreochromis_niloticus
ENSORLG00020015515	-	100	93.634	ENSONIG00000013748	-	100	93.634	Oreochromis_niloticus
ENSORLG00020015515	-	100	99.383	ENSORLG00000009178	-	100	99.383	Oryzias_latipes
ENSORLG00020015515	-	100	99.588	ENSORLG00015006764	-	100	99.588	Oryzias_latipes_hsok
ENSORLG00020015515	-	98	96.744	ENSOMEG00000022326	-	99	96.744	Oryzias_melastigma
ENSORLG00020015515	-	97	89.706	ENSPKIG00000024264	ddx61	98	89.189	Paramormyrops_kingsleyae
ENSORLG00020015515	-	100	81.725	ENSPMGG00000013355	-	100	81.725	Periophthalmus_magnuspinnatus
ENSORLG00020015515	-	100	91.803	ENSPFOG00000005750	-	100	91.803	Poecilia_formosa
ENSORLG00020015515	-	100	92.027	ENSPLAG00000000403	-	100	92.027	Poecilia_latipinna
ENSORLG00020015515	-	100	91.564	ENSPMEG00000023737	-	100	91.564	Poecilia_mexicana
ENSORLG00020015515	-	98	80.620	ENSPNYG00000015045	ddx61	99	80.620	Pundamilia_nyererei
ENSORLG00020015515	-	100	93.429	ENSPNYG00000003986	-	100	93.429	Pundamilia_nyererei
ENSORLG00020015515	-	98	85.833	ENSPNAG00000024072	ddx61	99	85.833	Pygocentrus_nattereri
ENSORLG00020015515	-	99	88.223	ENSPNAG00000008742	-	98	88.223	Pygocentrus_nattereri
ENSORLG00020015515	-	97	89.006	ENSSFOG00015021404	ddx61	99	87.143	Scleropages_formosus
ENSORLG00020015515	-	100	91.616	ENSSMAG00000001793	-	100	91.616	Scophthalmus_maximus
ENSORLG00020015515	-	96	87.207	ENSSMAG00000006591	ddx61	99	85.300	Scophthalmus_maximus
ENSORLG00020015515	-	100	93.878	ENSSDUG00000007530	-	100	93.878	Seriola_dumerili
ENSORLG00020015515	-	96	87.846	ENSSDUG00000009713	ddx61	98	86.792	Seriola_dumerili
ENSORLG00020015515	-	96	87.633	ENSSLDG00000000132	ddx61	98	86.583	Seriola_lalandi_dorsalis
ENSORLG00020015515	-	100	93.878	ENSSLDG00000007608	-	100	93.878	Seriola_lalandi_dorsalis
ENSORLG00020015515	-	100	94.683	ENSSPAG00000013878	-	99	96.190	Stegastes_partitus
ENSORLG00020015515	-	96	88.248	ENSSPAG00000001578	ddx61	98	87.212	Stegastes_partitus
ENSORLG00020015515	-	99	89.139	ENSTRUG00000012432	-	99	89.139	Takifugu_rubripes
ENSORLG00020015515	-	99	89.583	ENSTNIG00000003560	-	100	89.583	Tetraodon_nigroviridis
ENSORLG00020015515	-	100	91.383	ENSXCOG00000001406	-	100	91.383	Xiphophorus_couchianus
ENSORLG00020015515	-	100	91.383	ENSXMAG00000016090	-	100	91.383	Xiphophorus_maculatus