EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020015673 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 7598 bases
Position: chr1:3488271-3495868
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020014643	RRM_1	PF00076.22	3.7e-16	1	1
ENSORLP00020014630	RRM_1	PF00076.22	1.9e-15	1	1
ENSORLP00020014618	RRM_1	PF00076.22	2.8e-15	1	1
ENSORLP00020030896	RRM_1	PF00076.22	4.3e-15	1	1
ENSORLP00020014643	FYTT	PF07078.11	0.0005	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020033121	-	1676	-	ENSORLP00020014643	249 (aa)	-	-
ENSORLT00020022429	-	774	-	ENSORLP00020014618	257 (aa)	-	-
ENSORLT00020022405	-	1008	-	ENSORLP00020030896	335 (aa)	-	-
ENSORLT00020022432	-	846	-	ENSORLP00020014630	281 (aa)	-	-

Gene Model

Click here to download ENSORLG00020015673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020015673's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020015673	-	100	46.263	ENSORLG00020011942	alyref	100	46.181

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020015673	-	99	68.526	ENSAPOG00000000183	-	100	69.841	Acanthochromis_polyacanthus
ENSORLG00020015673	-	98	59.410	ENSACIG00000020351	-	99	60.886	Amphilophus_citrinellus
ENSORLG00020015673	-	98	44.322	ENSACIG00000006351	alyref	97	47.601	Amphilophus_citrinellus
ENSORLG00020015673	-	99	47.636	ENSAOCG00000014012	alyref	99	49.817	Amphiprion_ocellaris
ENSORLG00020015673	-	99	66.926	ENSAOCG00000019305	-	100	68.217	Amphiprion_ocellaris
ENSORLG00020015673	-	99	66.537	ENSAPEG00000013527	-	100	67.829	Amphiprion_percula
ENSORLG00020015673	-	99	47.636	ENSAPEG00000014603	alyref	99	49.817	Amphiprion_percula
ENSORLG00020015673	-	99	66.797	ENSATEG00000000382	-	100	68.872	Anabas_testudineus
ENSORLG00020015673	-	99	47.687	ENSATEG00000004307	alyref	99	49.104	Anabas_testudineus
ENSORLG00020015673	-	51	54.815	ENSAPLG00000014745	-	98	54.610	Anas_platyrhynchos
ENSORLG00020015673	-	99	64.639	ENSACLG00000010184	-	99	67.681	Astatotilapia_calliptera
ENSORLG00020015673	-	100	43.537	ENSACLG00000008432	alyref	100	48.364	Astatotilapia_calliptera
ENSORLG00020015673	-	100	45.936	ENSAMXG00000007359	alyref	100	48.264	Astyanax_mexicanus
ENSORLG00020015673	-	98	38.433	ENSCING00000013568	-	99	40.590	Ciona_intestinalis
ENSORLG00020015673	-	98	42.248	ENSCSAVG00000003324	-	99	43.023	Ciona_savignyi
ENSORLG00020015673	-	99	47.445	ENSCSEG00000017800	alyref	99	50.000	Cynoglossus_semilaevis
ENSORLG00020015673	-	100	66.929	ENSCVAG00000007789	-	100	68.110	Cyprinodon_variegatus
ENSORLG00020015673	-	99	48.708	ENSCVAG00000014869	alyref	99	50.000	Cyprinodon_variegatus
ENSORLG00020015673	-	99	47.535	ENSDARG00000077732	alyref	99	49.481	Danio_rerio
ENSORLG00020015673	-	96	40.876	FBgn0010774	Ref1	98	35.836	Drosophila_melanogaster
ENSORLG00020015673	-	100	39.370	ENSEBUG00000006305	alyref	100	42.023	Eptatretus_burgeri
ENSORLG00020015673	-	98	43.750	ENSEBUG00000008253	alyref	96	40.441	Eptatretus_burgeri
ENSORLG00020015673	-	98	49.615	ENSELUG00000008849	-	99	52.874	Esox_lucius
ENSORLG00020015673	-	98	48.097	ENSELUG00000017178	alyref	99	51.838	Esox_lucius
ENSORLG00020015673	-	58	58.278	ENSFALG00000011923	-	96	58.333	Ficedula_albicollis
ENSORLG00020015673	-	100	67.984	ENSFHEG00000004698	-	100	69.170	Fundulus_heteroclitus
ENSORLG00020015673	-	99	47.038	ENSFHEG00000019426	alyref	100	49.630	Fundulus_heteroclitus
ENSORLG00020015673	-	72	60.825	ENSGMOG00000013122	-	100	58.763	Gadus_morhua
ENSORLG00020015673	-	99	47.970	ENSGMOG00000009882	alyref	100	46.181	Gadus_morhua
ENSORLG00020015673	-	100	67.460	ENSGAFG00000007573	-	100	69.048	Gambusia_affinis
ENSORLG00020015673	-	99	47.518	ENSGAFG00000006014	alyref	100	49.638	Gambusia_affinis
ENSORLG00020015673	-	99	63.670	ENSHBUG00000001454	-	99	67.041	Haplochromis_burtoni
ENSORLG00020015673	-	100	43.537	ENSHBUG00000020196	alyref	100	48.364	Haplochromis_burtoni
ENSORLG00020015673	-	98	62.846	ENSHCOG00000012825	-	95	63.636	Hippocampus_comes
ENSORLG00020015673	-	99	46.786	ENSIPUG00000009469	alyref	99	48.763	Ictalurus_punctatus
ENSORLG00020015673	-	78	48.780	ENSSTOG00000016570	-	99	50.739	Ictidomys_tridecemlineatus
ENSORLG00020015673	-	99	48.727	ENSKMAG00000008912	alyref	100	50.000	Kryptolebias_marmoratus
ENSORLG00020015673	-	99	69.323	ENSKMAG00000006462	-	99	71.315	Kryptolebias_marmoratus
ENSORLG00020015673	-	100	65.074	ENSLBEG00000005387	-	100	65.074	Labrus_bergylta
ENSORLG00020015673	-	99	66.016	ENSLBEG00000012930	-	99	65.748	Labrus_bergylta
ENSORLG00020015673	-	97	52.439	ENSLBEG00000023118	alyref	94	48.339	Labrus_bergylta
ENSORLG00020015673	-	83	51.598	ENSLOCG00000013879	alyref	89	50.226	Lepisosteus_oculatus
ENSORLG00020015673	-	99	64.961	ENSMAMG00000005464	-	100	64.706	Mastacembelus_armatus
ENSORLG00020015673	-	99	45.238	ENSMAMG00000003034	alyref	99	50.183	Mastacembelus_armatus
ENSORLG00020015673	-	100	43.537	ENSMZEG00005008639	alyref	100	48.364	Maylandia_zebra
ENSORLG00020015673	-	99	64.259	ENSMZEG00005012096	-	99	67.300	Maylandia_zebra
ENSORLG00020015673	-	99	55.253	ENSMMOG00000007032	-	100	52.896	Mola_mola
ENSORLG00020015673	-	98	44.251	ENSMMOG00000012458	alyref	98	49.077	Mola_mola
ENSORLG00020015673	-	99	68.966	ENSMALG00000006054	-	100	66.794	Monopterus_albus
ENSORLG00020015673	-	75	53.403	ENSMLUG00000030671	-	98	45.788	Myotis_lucifugus
ENSORLG00020015673	-	100	43.478	ENSMLUG00000006521	-	100	43.728	Myotis_lucifugus
ENSORLG00020015673	-	97	46.125	ENSMLUG00000009247	-	98	44.649	Myotis_lucifugus
ENSORLG00020015673	-	97	45.035	ENSMLUG00000022467	-	98	41.115	Myotis_lucifugus
ENSORLG00020015673	-	100	44.444	ENSMLUG00000014372	-	100	46.071	Myotis_lucifugus
ENSORLG00020015673	-	97	44.485	ENSMLUG00000022178	-	98	43.066	Myotis_lucifugus
ENSORLG00020015673	-	75	50.769	ENSMLUG00000028605	-	98	42.806	Myotis_lucifugus
ENSORLG00020015673	-	100	46.043	ENSMLUG00000004098	-	100	47.778	Myotis_lucifugus
ENSORLG00020015673	-	100	48.148	ENSNGAG00000022014	-	100	49.815	Nannospalax_galili
ENSORLG00020015673	-	99	64.639	ENSNBRG00000017460	-	99	67.681	Neolamprologus_brichardi
ENSORLG00020015673	-	100	43.581	ENSNBRG00000001747	alyref	100	48.746	Neolamprologus_brichardi
ENSORLG00020015673	-	99	45.907	ENSONIG00000019434	alyref	100	48.582	Oreochromis_niloticus
ENSORLG00020015673	-	99	66.023	ENSONIG00000003296	-	99	68.077	Oreochromis_niloticus
ENSORLG00020015673	-	100	97.923	ENSORLG00000001620	-	100	97.923	Oryzias_latipes
ENSORLG00020015673	-	100	46.953	ENSORLG00015022664	alyref	100	46.341	Oryzias_latipes_hsok
ENSORLG00020015673	-	100	98.406	ENSORLG00015015143	-	100	98.406	Oryzias_latipes_hsok
ENSORLG00020015673	-	99	46.207	ENSOMEG00000019176	alyref	99	49.084	Oryzias_melastigma
ENSORLG00020015673	-	98	83.200	ENSOMEG00000007158	-	99	80.709	Oryzias_melastigma
ENSORLG00020015673	-	71	54.645	ENSPPAG00000036403	-	68	54.639	Pan_paniscus
ENSORLG00020015673	-	98	50.965	ENSPKIG00000006233	-	90	43.323	Paramormyrops_kingsleyae
ENSORLG00020015673	-	100	47.018	ENSPKIG00000007070	alyref	100	50.558	Paramormyrops_kingsleyae
ENSORLG00020015673	-	98	45.263	ENSPMGG00000016600	alyref	93	46.021	Periophthalmus_magnuspinnatus
ENSORLG00020015673	-	67	59.302	ENSPMGG00000012994	-	99	57.143	Periophthalmus_magnuspinnatus
ENSORLG00020015673	-	99	49.805	ENSPEMG00000016628	-	100	50.965	Peromyscus_maniculatus_bairdii
ENSORLG00020015673	-	100	68.254	ENSPFOG00000017094	-	100	69.444	Poecilia_formosa
ENSORLG00020015673	-	99	47.122	ENSPFOG00000022825	alyref	99	48.014	Poecilia_formosa
ENSORLG00020015673	-	100	68.254	ENSPLAG00000014380	-	100	69.444	Poecilia_latipinna
ENSORLG00020015673	-	99	47.292	ENSPLAG00000006948	alyref	100	48.551	Poecilia_latipinna
ENSORLG00020015673	-	100	68.254	ENSPMEG00000023039	-	100	69.444	Poecilia_mexicana
ENSORLG00020015673	-	99	47.122	ENSPMEG00000003547	alyref	100	48.014	Poecilia_mexicana
ENSORLG00020015673	-	100	65.251	ENSPREG00000003649	-	100	65.637	Poecilia_reticulata
ENSORLG00020015673	-	99	47.292	ENSPREG00000015795	alyref	100	48.551	Poecilia_reticulata
ENSORLG00020015673	-	98	63.035	ENSPNYG00000002879	-	98	65.637	Pundamilia_nyererei
ENSORLG00020015673	-	100	43.537	ENSPNYG00000017498	alyref	100	48.364	Pundamilia_nyererei
ENSORLG00020015673	-	100	46.429	ENSPNAG00000002531	alyref	100	46.953	Pygocentrus_nattereri
ENSORLG00020015673	-	92	48.163	ENSSBOG00000030924	-	84	54.000	Saimiri_boliviensis_boliviensis
ENSORLG00020015673	-	99	43.011	ENSSHAG00000012866	-	100	39.502	Sarcophilus_harrisii
ENSORLG00020015673	-	99	41.948	ENSSHAG00000000609	-	100	42.146	Sarcophilus_harrisii
ENSORLG00020015673	-	73	50.000	ENSSFOG00015003678	alyref	83	51.323	Scleropages_formosus
ENSORLG00020015673	-	83	53.846	ENSSFOG00015003923	alyref	75	53.571	Scleropages_formosus
ENSORLG00020015673	-	100	68.966	ENSSMAG00000011169	-	96	73.563	Scophthalmus_maximus
ENSORLG00020015673	-	100	47.842	ENSSMAG00000009283	alyref	99	49.455	Scophthalmus_maximus
ENSORLG00020015673	-	99	47.273	ENSSDUG00000016158	alyref	99	49.455	Seriola_dumerili
ENSORLG00020015673	-	99	44.369	ENSSLDG00000017803	alyref	99	49.275	Seriola_lalandi_dorsalis
ENSORLG00020015673	-	98	68.400	ENSSPAG00000017028	-	98	69.412	Stegastes_partitus
ENSORLG00020015673	-	100	59.091	ENSTRUG00000003051	-	100	56.410	Takifugu_rubripes
ENSORLG00020015673	-	99	48.507	ENSTNIG00000011595	alyref	99	50.000	Tetraodon_nigroviridis
ENSORLG00020015673	-	100	60.547	ENSTNIG00000014136	-	100	55.133	Tetraodon_nigroviridis
ENSORLG00020015673	-	75	53.927	ENSVVUG00000000272	-	94	51.556	Vulpes_vulpes
ENSORLG00020015673	-	98	47.122	ENSXCOG00000018047	alyref	99	47.653	Xiphophorus_couchianus
ENSORLG00020015673	-	99	68.379	ENSXMAG00000018086	-	100	68.504	Xiphophorus_maculatus
ENSORLG00020015673	-	98	47.122	ENSXMAG00000012218	alyref	99	47.653	Xiphophorus_maculatus