EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020015718 (Gene tree)
Gene ID: -
Gene Symbol: ddx56
Alias: -
Full Name: DEAD (Asp-Glu-Ala-Asp) box helicase 56
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 9258 bases
Position: chr12:1866572-1875829
Accession: ZDB-GENE-040825-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020030939	ResIII	PF04851.15	2.8e-08	1	1
ENSORLP00020030939	DEAD	PF00270.29	7.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020022508	-	3330	-	ENSORLP00020030939	578 (aa)	-	-

Gene Model

Click here to download ENSORLG00020015718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020015718's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020015718	ddx56	68	33.333	ENSORLG00020005546	ddx47	80	33.333
ENSORLG00020015718	ddx56	73	32.629	ENSORLG00020021215	ddx27	53	32.629
ENSORLG00020015718	ddx56	70	30.193	ENSORLG00020014661	ddx49	79	30.193

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020015718	ddx56	95	65.642	ENSG00000136271	DDX56	99	68.351	Homo_sapiens
ENSORLG00020015718	ddx56	97	84.848	ENSAPOG00000017113	ddx56	100	85.027	Acanthochromis_polyacanthus
ENSORLG00020015718	ddx56	95	64.493	ENSAMEG00000017711	DDX56	98	65.036	Ailuropoda_melanoleuca
ENSORLG00020015718	ddx56	92	70.841	ENSACIG00000013747	ddx56	100	82.065	Amphilophus_citrinellus
ENSORLG00020015718	ddx56	86	87.800	ENSAOCG00000018059	ddx56	94	87.800	Amphiprion_ocellaris
ENSORLG00020015718	ddx56	84	87.885	ENSAOCG00000015447	-	87	87.885	Amphiprion_ocellaris
ENSORLG00020015718	ddx56	97	84.946	ENSAPEG00000007267	ddx56	100	84.946	Amphiprion_percula
ENSORLG00020015718	ddx56	95	83.696	ENSATEG00000005279	ddx56	99	84.087	Anabas_testudineus
ENSORLG00020015718	ddx56	97	80.357	ENSACLG00000020113	ddx56	100	81.071	Astatotilapia_calliptera
ENSORLG00020015718	ddx56	96	73.118	ENSAMXG00000019357	ddx56	99	73.297	Astyanax_mexicanus
ENSORLG00020015718	ddx56	96	65.405	ENSBTAG00000010602	DDX56	99	65.766	Bos_taurus
ENSORLG00020015718	ddx56	95	38.004	WBGene00016073	C24H12.4	88	38.004	Caenorhabditis_elegans
ENSORLG00020015718	ddx56	95	65.704	ENSCJAG00000012233	DDX56	99	65.704	Callithrix_jacchus
ENSORLG00020015718	ddx56	79	62.144	ENSCAFG00000029295	DDX56	99	62.939	Canis_familiaris
ENSORLG00020015718	ddx56	95	63.043	ENSCAFG00020019695	DDX56	98	63.043	Canis_lupus_dingo
ENSORLG00020015718	ddx56	96	65.586	ENSCHIG00000014261	DDX56	99	65.586	Capra_hircus
ENSORLG00020015718	ddx56	87	69.094	ENSTSYG00000008048	DDX56	98	65.580	Carlito_syrichta
ENSORLG00020015718	ddx56	83	63.958	ENSCAPG00000006286	DDX56	99	63.958	Cavia_aperea
ENSORLG00020015718	ddx56	96	65.405	ENSCPOG00000003359	DDX56	99	65.405	Cavia_porcellus
ENSORLG00020015718	ddx56	95	64.919	ENSCCAG00000025303	DDX56	99	65.162	Cebus_capucinus
ENSORLG00020015718	ddx56	95	65.036	ENSCATG00000039389	DDX56	98	65.036	Cercocebus_atys
ENSORLG00020015718	ddx56	95	64.738	ENSCLAG00000007666	DDX56	99	64.738	Chinchilla_lanigera
ENSORLG00020015718	ddx56	95	65.217	ENSCSAG00000015636	DDX56	98	65.217	Chlorocebus_sabaeus
ENSORLG00020015718	ddx56	95	69.604	ENSCPBG00000024556	DDX56	99	69.604	Chrysemys_picta_bellii
ENSORLG00020015718	ddx56	87	60.827	ENSCING00000005185	-	98	61.220	Ciona_intestinalis
ENSORLG00020015718	ddx56	87	57.915	ENSCSAVG00000011266	-	99	60.120	Ciona_savignyi
ENSORLG00020015718	ddx56	95	65.036	ENSCANG00000028187	DDX56	98	65.036	Colobus_angolensis_palliatus
ENSORLG00020015718	ddx56	95	65.580	ENSCGRG00001019019	Ddx56	98	65.580	Cricetulus_griseus_chok1gshd
ENSORLG00020015718	ddx56	95	65.580	ENSCGRG00000011870	Ddx56	98	65.580	Cricetulus_griseus_crigri
ENSORLG00020015718	ddx56	97	79.929	ENSCSEG00000008368	ddx56	100	80.639	Cynoglossus_semilaevis
ENSORLG00020015718	ddx56	97	85.484	ENSCVAG00000006499	ddx56	100	85.484	Cyprinodon_variegatus
ENSORLG00020015718	ddx56	96	78.495	ENSDARG00000020913	ddx56	99	78.674	Danio_rerio
ENSORLG00020015718	ddx56	83	64.092	ENSDNOG00000036526	DDX56	97	64.092	Dasypus_novemcinctus
ENSORLG00020015718	ddx56	96	49.821	FBgn0001565	Hlc	98	49.821	Drosophila_melanogaster
ENSORLG00020015718	ddx56	70	57.946	ENSETEG00000002969	-	74	57.946	Echinops_telfairi
ENSORLG00020015718	ddx56	82	45.929	ENSETEG00000019559	-	100	45.929	Echinops_telfairi
ENSORLG00020015718	ddx56	94	66.062	ENSEBUG00000009986	ddx56	99	66.788	Eptatretus_burgeri
ENSORLG00020015718	ddx56	95	64.674	ENSEASG00005017795	DDX56	98	64.855	Equus_asinus_asinus
ENSORLG00020015718	ddx56	95	64.493	ENSECAG00000019897	DDX56	98	64.674	Equus_caballus
ENSORLG00020015718	ddx56	83	64.226	ENSEEUG00000004849	DDX56	98	64.226	Erinaceus_europaeus
ENSORLG00020015718	ddx56	97	80.108	ENSELUG00000004150	ddx56	100	80.392	Esox_lucius
ENSORLG00020015718	ddx56	95	64.493	ENSFCAG00000010261	DDX56	98	64.855	Felis_catus
ENSORLG00020015718	ddx56	95	65.091	ENSFDAG00000007128	DDX56	98	65.091	Fukomys_damarensis
ENSORLG00020015718	ddx56	97	82.258	ENSFHEG00000018008	ddx56	97	86.166	Fundulus_heteroclitus
ENSORLG00020015718	ddx56	97	76.344	ENSGAFG00000006906	ddx56	99	76.344	Gambusia_affinis
ENSORLG00020015718	ddx56	91	71.157	ENSGAGG00000006789	DDX56	93	71.157	Gopherus_agassizii
ENSORLG00020015718	ddx56	95	65.642	ENSGGOG00000012031	DDX56	98	65.642	Gorilla_gorilla
ENSORLG00020015718	ddx56	92	76.548	ENSHBUG00000015246	ddx56	96	77.298	Haplochromis_burtoni
ENSORLG00020015718	ddx56	96	63.964	ENSHGLG00000017271	DDX56	99	63.964	Heterocephalus_glaber_female
ENSORLG00020015718	ddx56	96	63.964	ENSHGLG00100015731	DDX56	99	63.964	Heterocephalus_glaber_male
ENSORLG00020015718	ddx56	95	80.686	ENSHCOG00000001685	ddx56	99	80.686	Hippocampus_comes
ENSORLG00020015718	ddx56	96	74.327	ENSIPUG00000006602	ddx56	96	74.865	Ictalurus_punctatus
ENSORLG00020015718	ddx56	95	65.217	ENSSTOG00000000464	DDX56	98	65.217	Ictidomys_tridecemlineatus
ENSORLG00020015718	ddx56	95	65.280	ENSJJAG00000014269	Ddx56	99	65.280	Jaculus_jaculus
ENSORLG00020015718	ddx56	96	83.571	ENSKMAG00000016611	ddx56	99	83.750	Kryptolebias_marmoratus
ENSORLG00020015718	ddx56	96	81.216	ENSLBEG00000026281	ddx56	100	81.395	Labrus_bergylta
ENSORLG00020015718	ddx56	96	71.609	ENSLACG00000015551	DDX56	99	71.708	Latimeria_chalumnae
ENSORLG00020015718	ddx56	97	76.064	ENSLOCG00000015185	ddx56	99	76.418	Lepisosteus_oculatus
ENSORLG00020015718	ddx56	96	65.950	ENSLAFG00000018206	DDX56	99	65.950	Loxodonta_africana
ENSORLG00020015718	ddx56	95	65.233	ENSMFAG00000041001	DDX56	98	65.233	Macaca_fascicularis
ENSORLG00020015718	ddx56	95	65.233	ENSMMUG00000002645	DDX56	98	65.233	Macaca_mulatta
ENSORLG00020015718	ddx56	95	65.233	ENSMNEG00000028492	DDX56	98	65.233	Macaca_nemestrina
ENSORLG00020015718	ddx56	95	65.399	ENSMLEG00000043591	DDX56	98	65.399	Mandrillus_leucophaeus
ENSORLG00020015718	ddx56	97	81.607	ENSMAMG00000007776	ddx56	100	82.321	Mastacembelus_armatus
ENSORLG00020015718	ddx56	97	80.357	ENSMZEG00005009813	ddx56	100	81.071	Maylandia_zebra
ENSORLG00020015718	ddx56	95	65.823	ENSMICG00000005550	DDX56	99	65.823	Microcebus_murinus
ENSORLG00020015718	ddx56	95	64.312	ENSMOCG00000016782	Ddx56	98	64.312	Microtus_ochrogaster
ENSORLG00020015718	ddx56	97	78.508	ENSMMOG00000009654	ddx56	100	79.218	Mola_mola
ENSORLG00020015718	ddx56	96	60.606	ENSMODG00000016137	DDX56	98	60.606	Monodelphis_domestica
ENSORLG00020015718	ddx56	65	77.368	ENSMALG00000016910	ddx56	99	77.368	Monopterus_albus
ENSORLG00020015718	ddx56	95	64.376	MGP_CAROLIEiJ_G0016069	Ddx56	98	66.532	Mus_caroli
ENSORLG00020015718	ddx56	95	64.738	ENSMUSG00000004393	Ddx56	98	66.935	Mus_musculus
ENSORLG00020015718	ddx56	95	64.674	MGP_PahariEiJ_G0016822	Ddx56	98	66.532	Mus_pahari
ENSORLG00020015718	ddx56	95	64.738	MGP_SPRETEiJ_G0016911	Ddx56	98	66.935	Mus_spretus
ENSORLG00020015718	ddx56	95	64.855	ENSMPUG00000018196	DDX56	87	64.855	Mustela_putorius_furo
ENSORLG00020015718	ddx56	95	63.949	ENSMLUG00000003509	DDX56	98	64.493	Myotis_lucifugus
ENSORLG00020015718	ddx56	96	66.126	ENSNGAG00000018785	Ddx56	99	66.126	Nannospalax_galili
ENSORLG00020015718	ddx56	92	77.024	ENSNBRG00000002656	ddx56	96	77.024	Neolamprologus_brichardi
ENSORLG00020015718	ddx56	95	66.004	ENSNLEG00000003816	DDX56	98	66.004	Nomascus_leucogenys
ENSORLG00020015718	ddx56	85	62.777	ENSMEUG00000006788	DDX56	99	62.777	Notamacropus_eugenii
ENSORLG00020015718	ddx56	95	63.273	ENSOPRG00000000292	-	98	63.273	Ochotona_princeps
ENSORLG00020015718	ddx56	65	68.617	ENSODEG00000014807	DDX56	99	68.617	Octodon_degus
ENSORLG00020015718	ddx56	97	78.674	ENSONIG00000011509	ddx56	99	78.674	Oreochromis_niloticus
ENSORLG00020015718	ddx56	70	57.248	ENSOANG00000015987	-	94	57.248	Ornithorhynchus_anatinus
ENSORLG00020015718	ddx56	93	57.565	ENSOANG00000006320	-	99	57.459	Ornithorhynchus_anatinus
ENSORLG00020015718	ddx56	95	65.091	ENSOCUG00000022918	DDX56	98	65.154	Oryctolagus_cuniculus
ENSORLG00020015718	ddx56	97	99.462	ENSORLG00000001434	ddx56	100	99.462	Oryzias_latipes
ENSORLG00020015718	ddx56	99	99.133	ENSORLG00015003004	ddx56	99	99.133	Oryzias_latipes_hsok
ENSORLG00020015718	ddx56	97	96.416	ENSOMEG00000022072	ddx56	99	96.416	Oryzias_melastigma
ENSORLG00020015718	ddx56	95	64.144	ENSOGAG00000009981	DDX56	99	65.045	Otolemur_garnettii
ENSORLG00020015718	ddx56	96	65.766	ENSOARG00000015240	DDX56	99	65.766	Ovis_aries
ENSORLG00020015718	ddx56	95	62.811	ENSPPAG00000029147	DDX56	98	62.811	Pan_paniscus
ENSORLG00020015718	ddx56	95	53.777	ENSPPAG00000031263	-	98	53.777	Pan_paniscus
ENSORLG00020015718	ddx56	95	64.312	ENSPPRG00000014594	DDX56	98	64.312	Panthera_pardus
ENSORLG00020015718	ddx56	85	61.020	ENSPTIG00000019500	DDX56	93	61.429	Panthera_tigris_altaica
ENSORLG00020015718	ddx56	95	65.642	ENSPTRG00000019147	DDX56	98	65.642	Pan_troglodytes
ENSORLG00020015718	ddx56	90	53.220	ENSPTRG00000052765	-	99	54.545	Pan_troglodytes
ENSORLG00020015718	ddx56	95	64.855	ENSPANG00000002446	DDX56	98	64.855	Papio_anubis
ENSORLG00020015718	ddx56	97	75.627	ENSPKIG00000018998	ddx56	99	75.627	Paramormyrops_kingsleyae
ENSORLG00020015718	ddx56	92	81.767	ENSPMGG00000017421	ddx56	99	81.767	Periophthalmus_magnuspinnatus
ENSORLG00020015718	ddx56	96	66.964	ENSPCIG00000009336	DDX56	99	66.964	Phascolarctos_cinereus
ENSORLG00020015718	ddx56	97	85.868	ENSPFOG00000018658	ddx56	100	85.868	Poecilia_formosa
ENSORLG00020015718	ddx56	97	86.047	ENSPLAG00000019208	ddx56	100	86.047	Poecilia_latipinna
ENSORLG00020015718	ddx56	97	85.689	ENSPMEG00000001775	ddx56	100	85.689	Poecilia_mexicana
ENSORLG00020015718	ddx56	97	84.946	ENSPREG00000015142	ddx56	100	84.946	Poecilia_reticulata
ENSORLG00020015718	ddx56	95	65.461	ENSPPYG00000017591	DDX56	98	65.461	Pongo_abelii
ENSORLG00020015718	ddx56	93	65.993	ENSPCAG00000011499	DDX56	99	65.993	Procavia_capensis
ENSORLG00020015718	ddx56	95	65.823	ENSPCOG00000024864	DDX56	99	65.823	Propithecus_coquereli
ENSORLG00020015718	ddx56	84	69.668	ENSPVAG00000000791	DDX56	87	69.668	Pteropus_vampyrus
ENSORLG00020015718	ddx56	97	80.179	ENSPNYG00000019212	ddx56	100	80.893	Pundamilia_nyererei
ENSORLG00020015718	ddx56	94	76.770	ENSPNAG00000025446	ddx56	99	77.314	Pygocentrus_nattereri
ENSORLG00020015718	ddx56	95	64.855	ENSRNOG00000004670	Ddx56	98	64.855	Rattus_norvegicus
ENSORLG00020015718	ddx56	95	65.217	ENSRBIG00000030140	DDX56	98	65.217	Rhinopithecus_bieti
ENSORLG00020015718	ddx56	95	65.036	ENSRROG00000044428	DDX56	98	65.036	Rhinopithecus_roxellana
ENSORLG00020015718	ddx56	93	43.027	YLR276C	-	97	44.218	Saccharomyces_cerevisiae
ENSORLG00020015718	ddx56	95	65.162	ENSSBOG00000034339	DDX56	99	65.162	Saimiri_boliviensis_boliviensis
ENSORLG00020015718	ddx56	84	67.078	ENSSHAG00000016615	DDX56	99	67.078	Sarcophilus_harrisii
ENSORLG00020015718	ddx56	97	75.536	ENSSFOG00015012795	ddx56	100	75.536	Scleropages_formosus
ENSORLG00020015718	ddx56	97	81.172	ENSSMAG00000011280	ddx56	99	83.209	Scophthalmus_maximus
ENSORLG00020015718	ddx56	97	84.520	ENSSDUG00000023597	ddx56	100	84.698	Seriola_dumerili
ENSORLG00020015718	ddx56	97	84.164	ENSSLDG00000018369	ddx56	100	84.342	Seriola_lalandi_dorsalis
ENSORLG00020015718	ddx56	66	77.586	ENSSARG00000014363	DDX56	78	71.014	Sorex_araneus
ENSORLG00020015718	ddx56	97	70.213	ENSSPUG00000000784	DDX56	97	70.870	Sphenodon_punctatus
ENSORLG00020015718	ddx56	92	86.517	ENSSPAG00000009392	ddx56	99	86.704	Stegastes_partitus
ENSORLG00020015718	ddx56	95	64.260	ENSSSCG00000016745	DDX56	99	65.162	Sus_scrofa
ENSORLG00020015718	ddx56	97	80.674	ENSTRUG00000018623	ddx56	100	80.674	Takifugu_rubripes
ENSORLG00020015718	ddx56	96	79.646	ENSTNIG00000013593	ddx56	100	80.354	Tetraodon_nigroviridis
ENSORLG00020015718	ddx56	95	64.505	ENSTBEG00000007119	DDX56	99	64.505	Tupaia_belangeri
ENSORLG00020015718	ddx56	83	64.375	ENSTTRG00000010552	DDX56	99	64.792	Tursiops_truncatus
ENSORLG00020015718	ddx56	95	64.855	ENSUAMG00000014194	DDX56	98	65.399	Ursus_americanus
ENSORLG00020015718	ddx56	95	64.855	ENSUMAG00000009666	DDX56	98	65.399	Ursus_maritimus
ENSORLG00020015718	ddx56	95	63.768	ENSVVUG00000011905	DDX56	98	64.312	Vulpes_vulpes
ENSORLG00020015718	ddx56	95	71.043	ENSXETG00000019000	ddx56	99	71.043	Xenopus_tropicalis
ENSORLG00020015718	ddx56	97	80.287	ENSXCOG00000017413	ddx56	99	80.287	Xiphophorus_couchianus
ENSORLG00020015718	ddx56	97	85.484	ENSXMAG00000018749	ddx56	100	85.484	Xiphophorus_maculatus