EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020015911 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 6682 bases
Position: chr15:11124990-11131671
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020014901	zf-C2H2	PF00096.26	9.8e-27	1	5
ENSORLP00020014901	zf-C2H2	PF00096.26	9.8e-27	2	5
ENSORLP00020014901	zf-C2H2	PF00096.26	9.8e-27	3	5
ENSORLP00020014901	zf-C2H2	PF00096.26	9.8e-27	4	5
ENSORLP00020014901	zf-C2H2	PF00096.26	9.8e-27	5	5
ENSORLP00020014910	zf-C2H2	PF00096.26	9.8e-27	1	5
ENSORLP00020014910	zf-C2H2	PF00096.26	9.8e-27	2	5
ENSORLP00020014910	zf-C2H2	PF00096.26	9.8e-27	3	5
ENSORLP00020014910	zf-C2H2	PF00096.26	9.8e-27	4	5
ENSORLP00020014910	zf-C2H2	PF00096.26	9.8e-27	5	5
ENSORLP00020014901	zf-met	PF12874.7	7.3e-05	1	1
ENSORLP00020014910	zf-met	PF12874.7	7.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020022776	-	2888	-	ENSORLP00020014910	466 (aa)	-	-
ENSORLT00020022773	-	4149	-	ENSORLP00020014901	466 (aa)	-	-

Gene Model

Click here to download ENSORLG00020015911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020015911's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020015911	-	74	35.000	ENSORLG00020007018	-	76	35.000
ENSORLG00020015911	-	67	30.894	ENSORLG00020008424	-	98	30.894
ENSORLG00020015911	-	62	33.981	ENSORLG00020005815	-	90	33.981
ENSORLG00020015911	-	88	30.542	ENSORLG00020015703	-	53	30.542
ENSORLG00020015911	-	75	31.313	ENSORLG00020010285	znf646	63	32.751
ENSORLG00020015911	-	81	30.645	ENSORLG00020017850	-	97	30.645
ENSORLG00020015911	-	66	30.556	ENSORLG00020008346	-	82	30.556
ENSORLG00020015911	-	77	32.323	ENSORLG00020009857	-	82	32.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020015911	-	100	71.915	ENSGAFG00000005031	-	100	71.975	Gambusia_affinis
ENSORLG00020015911	-	100	99.571	ENSORLG00000026680	-	100	99.571	Oryzias_latipes
ENSORLG00020015911	-	100	99.356	ENSORLG00015021388	-	100	99.356	Oryzias_latipes_hsok
ENSORLG00020015911	-	100	71.125	ENSPFOG00000005622	-	100	70.913	Poecilia_formosa
ENSORLG00020015911	-	100	71.125	ENSPLAG00000018358	-	100	70.913	Poecilia_latipinna
ENSORLG00020015911	-	100	70.913	ENSPMEG00000017903	-	100	70.701	Poecilia_mexicana
ENSORLG00020015911	-	73	31.325	ENSXCOG00000003001	-	83	31.707	Xiphophorus_couchianus