EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020016052 (Gene tree)
Gene ID: -
Gene Symbol: srsf4
Alias: -
Full Name: serine/arginine-rich splicing factor 4
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 5099 bases
Position: chr11:9789261-9794359
Accession: ZDB-GENE-030131-591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020015047	RRM_1	PF00076.22	2.4e-32	1	2
ENSORLP00020015047	RRM_1	PF00076.22	2.4e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020022956	-	813	-	ENSORLP00020015047	270 (aa)	-	-

Gene Model

Click here to download ENSORLG00020016052's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020016052's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020016052	srsf4	54	64.430	ENSORLG00020017506	srsf6a	89	64.430
ENSORLG00020016052	srsf4	96	51.685	ENSORLG00020003281	srsf5	94	50.758
ENSORLG00020016052	srsf4	83	41.485	ENSORLG00020017678	srsf9	73	42.162
ENSORLG00020016052	srsf4	60	44.970	ENSORLG00020009456	srsf1a	70	45.238

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020016052	srsf4	65	78.771	ENSAPOG00000023399	-	60	75.281	Acanthochromis_polyacanthus
ENSORLG00020016052	srsf4	92	79.600	ENSACIG00000018649	srsf4	90	96.694	Amphilophus_citrinellus
ENSORLG00020016052	srsf4	60	96.296	ENSAOCG00000005997	srsf4	92	96.296	Amphiprion_ocellaris
ENSORLG00020016052	srsf4	82	88.106	ENSATEG00000005680	srsf4	71	89.623	Anabas_testudineus
ENSORLG00020016052	srsf4	85	84.647	ENSACLG00000003395	srsf4	90	76.071	Astatotilapia_calliptera
ENSORLG00020016052	srsf4	66	77.473	ENSACLG00000021269	-	51	76.374	Astatotilapia_calliptera
ENSORLG00020016052	srsf4	96	75.581	ENSAMXG00000034811	srsf4	70	91.549	Astyanax_mexicanus
ENSORLG00020016052	srsf4	64	51.759	WBGene00004698	rsp-1	97	49.306	Caenorhabditis_elegans
ENSORLG00020016052	srsf4	64	59.140	ENSCING00000011362	-	65	56.216	Ciona_intestinalis
ENSORLG00020016052	srsf4	66	59.278	ENSCING00000020631	-	81	58.163	Ciona_intestinalis
ENSORLG00020016052	srsf4	65	63.636	ENSCING00000012370	-	68	60.606	Ciona_intestinalis
ENSORLG00020016052	srsf4	64	55.440	ENSCING00000024718	-	56	54.404	Ciona_intestinalis
ENSORLG00020016052	srsf4	99	54.317	ENSCSAVG00000002581	-	94	55.056	Ciona_savignyi
ENSORLG00020016052	srsf4	66	90.374	ENSCSEG00000010058	srsf4	75	90.083	Cynoglossus_semilaevis
ENSORLG00020016052	srsf4	66	86.813	ENSDARG00000105293	srsf4	66	94.286	Danio_rerio
ENSORLG00020016052	srsf4	74	60.287	FBgn0004587	B52	95	58.594	Drosophila_melanogaster
ENSORLG00020016052	srsf4	65	61.111	ENSEBUG00000001681	srsf4	67	60.335	Eptatretus_burgeri
ENSORLG00020016052	srsf4	58	60.377	ENSEBUG00000003129	srsf4	69	60.256	Eptatretus_burgeri
ENSORLG00020016052	srsf4	100	52.431	ENSEBUG00000005588	srsf4	59	53.778	Eptatretus_burgeri
ENSORLG00020016052	srsf4	99	71.479	ENSELUG00000017551	srsf4	93	73.846	Esox_lucius
ENSORLG00020016052	srsf4	66	95.506	ENSFHEG00000007472	srsf4	88	98.780	Fundulus_heteroclitus
ENSORLG00020016052	srsf4	66	88.764	ENSGMOG00000012906	srsf4	57	88.333	Gadus_morhua
ENSORLG00020016052	srsf4	91	75.889	ENSGAFG00000018496	srsf4	69	97.368	Gambusia_affinis
ENSORLG00020016052	srsf4	66	93.889	ENSGACG00000002389	srsf4	56	91.667	Gasterosteus_aculeatus
ENSORLG00020016052	srsf4	66	77.473	ENSHBUG00000011326	-	51	76.374	Haplochromis_burtoni
ENSORLG00020016052	srsf4	67	98.485	ENSHCOG00000012540	srsf4	69	89.247	Hippocampus_comes
ENSORLG00020016052	srsf4	66	93.956	ENSKMAG00000013631	srsf4	82	79.426	Kryptolebias_marmoratus
ENSORLG00020016052	srsf4	65	76.796	ENSLOCG00000001442	-	50	75.956	Lepisosteus_oculatus
ENSORLG00020016052	srsf4	80	88.372	ENSMAMG00000004888	srsf4	70	95.041	Mastacembelus_armatus
ENSORLG00020016052	srsf4	85	84.647	ENSMZEG00005026275	srsf4	90	76.071	Maylandia_zebra
ENSORLG00020016052	srsf4	88	78.629	ENSMMOG00000013653	srsf4	66	85.000	Mola_mola
ENSORLG00020016052	srsf4	66	87.640	ENSMODG00000011052	SRSF4	56	84.444	Monodelphis_domestica
ENSORLG00020016052	srsf4	98	77.574	ENSMALG00000013392	srsf4	66	92.697	Monopterus_albus
ENSORLG00020016052	srsf4	66	71.508	ENSNLEG00000030787	-	62	68.927	Nomascus_leucogenys
ENSORLG00020016052	srsf4	91	86.400	ENSORLG00015007566	srsf4	71	100.000	Oryzias_latipes_hsok
ENSORLG00020016052	srsf4	66	87.958	ENSPMGG00000013436	srsf4	95	81.102	Periophthalmus_magnuspinnatus
ENSORLG00020016052	srsf4	65	66.298	ENSPMAG00000009397	srsf4	68	65.934	Petromyzon_marinus
ENSORLG00020016052	srsf4	66	98.324	ENSPLAG00000008812	srsf4	65	82.609	Poecilia_latipinna
ENSORLG00020016052	srsf4	66	95.055	ENSPMEG00000023638	srsf4	53	92.391	Poecilia_mexicana
ENSORLG00020016052	srsf4	73	98.507	ENSPREG00000009639	srsf4	67	100.000	Poecilia_reticulata
ENSORLG00020016052	srsf4	66	91.758	ENSPNYG00000003796	srsf4	69	79.018	Pundamilia_nyererei
ENSORLG00020016052	srsf4	98	64.087	ENSPNAG00000023844	srsf4	54	88.333	Pygocentrus_nattereri
ENSORLG00020016052	srsf4	54	85.034	ENSSHAG00000012407	SRSF4	51	81.208	Sarcophilus_harrisii
ENSORLG00020016052	srsf4	65	92.045	ENSSFOG00015020292	srsf4	72	97.403	Scleropages_formosus
ENSORLG00020016052	srsf4	67	94.086	ENSSMAG00000001707	srsf4	51	87.568	Scophthalmus_maximus
ENSORLG00020016052	srsf4	66	78.212	ENSSLDG00000009745	srsf4	62	75.556	Seriola_lalandi_dorsalis
ENSORLG00020016052	srsf4	66	95.531	ENSSPAG00000014538	srsf4	83	95.041	Stegastes_partitus
ENSORLG00020016052	srsf4	87	80.075	ENSTRUG00000011891	srsf4	90	78.623	Takifugu_rubripes
ENSORLG00020016052	srsf4	66	72.340	ENSXCOG00000003212	-	55	71.809	Xiphophorus_couchianus
ENSORLG00020016052	srsf4	66	95.082	ENSXCOG00000018826	srsf4	95	86.260	Xiphophorus_couchianus