EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020016067 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 2778 bases
Position: chr3:34798961-34801738
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020015061	RVT_1	PF00078.27	1.3e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020022983	-	2778	-	ENSORLP00020015061	926 (aa)	-	-

Gene Model

Click here to download ENSORLG00020016067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020016067's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020016067	-	93	30.587	ENSORLG00020017758	-	69	30.587
ENSORLG00020016067	-	99	44.301	ENSORLG00020016870	-	74	44.301
ENSORLG00020016067	-	62	51.832	ENSORLG00020006818	-	64	51.832
ENSORLG00020016067	-	56	31.776	ENSORLG00020000993	-	56	31.776
ENSORLG00020016067	-	85	100.000	ENSORLG00020013618	-	100	100.000
ENSORLG00020016067	-	85	99.873	ENSORLG00020013755	-	100	99.873
ENSORLG00020016067	-	68	49.285	ENSORLG00020018783	-	64	49.285
ENSORLG00020016067	-	50	32.421	ENSORLG00020014626	-	87	32.421
ENSORLG00020016067	-	62	52.007	ENSORLG00020021090	-	64	52.007
ENSORLG00020016067	-	90	99.761	ENSORLG00020007542	-	100	99.761
ENSORLG00020016067	-	99	42.470	ENSORLG00020021337	-	90	42.470
ENSORLG00020016067	-	83	45.090	ENSORLG00020008765	-	98	45.090
ENSORLG00020016067	-	83	45.478	ENSORLG00020008557	-	70	45.478

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020016067	-	99	43.621	ENSACLG00000006792	-	76	43.621	Astatotilapia_calliptera
ENSORLG00020016067	-	99	44.384	ENSACLG00000014667	-	74	44.384	Astatotilapia_calliptera
ENSORLG00020016067	-	91	44.693	ENSACLG00000016372	-	72	44.693	Astatotilapia_calliptera
ENSORLG00020016067	-	83	44.588	ENSACLG00000005544	-	70	44.588	Astatotilapia_calliptera
ENSORLG00020016067	-	99	43.730	ENSAMXG00000030338	-	81	43.730	Astyanax_mexicanus
ENSORLG00020016067	-	69	57.746	ENSDARG00000098557	BX323564.1	67	57.746	Danio_rerio
ENSORLG00020016067	-	50	56.616	ENSDARG00000100538	si:dkeyp-88h4.2	59	56.616	Danio_rerio
ENSORLG00020016067	-	100	51.672	ENSDARG00000103841	CU024870.1	75	51.672	Danio_rerio
ENSORLG00020016067	-	100	57.543	ENSDARG00000105300	BX927081.1	74	57.543	Danio_rerio
ENSORLG00020016067	-	100	51.672	ENSDARG00000103976	BX544877.1	74	51.672	Danio_rerio
ENSORLG00020016067	-	99	53.182	ENSDARG00000099710	BX284696.1	74	53.182	Danio_rerio
ENSORLG00020016067	-	99	46.587	ENSDARG00000100925	CU104709.1	74	46.587	Danio_rerio
ENSORLG00020016067	-	99	53.074	ENSDARG00000100234	BX511246.1	74	53.074	Danio_rerio
ENSORLG00020016067	-	61	57.774	ENSDARG00000086849	si:dkey-187k19.2	99	57.774	Danio_rerio
ENSORLG00020016067	-	73	48.458	ENSKMAG00000018235	-	72	48.458	Kryptolebias_marmoratus
ENSORLG00020016067	-	99	43.211	ENSKMAG00000011717	-	74	43.211	Kryptolebias_marmoratus
ENSORLG00020016067	-	97	43.126	ENSKMAG00000014582	-	74	43.126	Kryptolebias_marmoratus
ENSORLG00020016067	-	50	31.006	ENSLOCG00000000597	-	100	31.006	Lepisosteus_oculatus
ENSORLG00020016067	-	65	39.439	ENSLOCG00000000531	-	98	39.439	Lepisosteus_oculatus
ENSORLG00020016067	-	89	43.765	ENSONIG00000020693	-	99	43.765	Oreochromis_niloticus
ENSORLG00020016067	-	99	43.844	ENSORLG00000028372	-	95	43.844	Oryzias_latipes
ENSORLG00020016067	-	69	98.748	ENSORLG00000028041	-	67	98.748	Oryzias_latipes
ENSORLG00020016067	-	81	45.756	ENSORLG00000022810	-	68	45.756	Oryzias_latipes
ENSORLG00020016067	-	99	45.563	ENSORLG00000025257	-	74	45.563	Oryzias_latipes
ENSORLG00020016067	-	99	45.671	ENSORLG00000028184	-	74	45.671	Oryzias_latipes
ENSORLG00020016067	-	100	44.624	ENSORLG00000027203	-	74	44.624	Oryzias_latipes
ENSORLG00020016067	-	99	45.494	ENSORLG00000024361	-	74	45.494	Oryzias_latipes
ENSORLG00020016067	-	99	45.887	ENSORLG00000028539	-	74	45.887	Oryzias_latipes
ENSORLG00020016067	-	53	48.884	ENSORLG00000026021	-	61	47.969	Oryzias_latipes
ENSORLG00020016067	-	84	46.497	ENSORLG00000027119	-	71	46.497	Oryzias_latipes
ENSORLG00020016067	-	99	45.238	ENSORLG00000021884	-	74	45.238	Oryzias_latipes
ENSORLG00020016067	-	99	44.194	ENSORLG00000027316	-	74	44.194	Oryzias_latipes
ENSORLG00020016067	-	92	44.162	ENSORLG00000030600	-	73	44.162	Oryzias_latipes
ENSORLG00020016067	-	100	44.946	ENSORLG00000027038	-	74	44.946	Oryzias_latipes
ENSORLG00020016067	-	99	44.757	ENSORLG00000024817	-	99	44.757	Oryzias_latipes
ENSORLG00020016067	-	99	44.831	ENSORLG00000022021	-	74	44.831	Oryzias_latipes
ENSORLG00020016067	-	100	98.596	ENSORLG00000027382	-	75	98.596	Oryzias_latipes
ENSORLG00020016067	-	81	46.348	ENSORLG00000026865	-	70	46.348	Oryzias_latipes
ENSORLG00020016067	-	99	45.168	ENSORLG00000022718	-	74	45.168	Oryzias_latipes
ENSORLG00020016067	-	72	46.131	ENSORLG00000030108	-	67	46.131	Oryzias_latipes
ENSORLG00020016067	-	99	42.082	ENSORLG00015007330	-	74	42.082	Oryzias_latipes_hsok
ENSORLG00020016067	-	50	48.052	ENSORLG00015001172	-	71	48.052	Oryzias_latipes_hsok
ENSORLG00020016067	-	99	45.130	ENSORLG00015019816	-	74	45.130	Oryzias_latipes_hsok
ENSORLG00020016067	-	99	45.130	ENSORLG00015019437	-	94	45.130	Oryzias_latipes_hsok
ENSORLG00020016067	-	99	44.275	ENSORLG00015014452	-	74	44.275	Oryzias_latipes_hsok
ENSORLG00020016067	-	89	44.740	ENSORLG00015021204	-	98	44.740	Oryzias_latipes_hsok
ENSORLG00020016067	-	99	43.757	ENSOMEG00000021029	-	85	43.757	Oryzias_melastigma
ENSORLG00020016067	-	83	42.432	ENSOMEG00000015408	-	71	42.432	Oryzias_melastigma
ENSORLG00020016067	-	93	44.971	ENSPKIG00000020531	-	82	44.971	Paramormyrops_kingsleyae
ENSORLG00020016067	-	66	44.625	ENSPFOG00000023623	-	95	44.625	Poecilia_formosa
ENSORLG00020016067	-	86	38.308	ENSPFOG00000013154	-	99	38.308	Poecilia_formosa
ENSORLG00020016067	-	84	47.522	ENSXMAG00000022515	-	81	47.522	Xiphophorus_maculatus
ENSORLG00020016067	-	87	45.612	ENSXMAG00000024671	-	71	45.612	Xiphophorus_maculatus
ENSORLG00020016067	-	84	47.261	ENSXMAG00000026019	-	71	47.261	Xiphophorus_maculatus
ENSORLG00020016067	-	97	30.303	ENSXMAG00000028372	-	70	30.303	Xiphophorus_maculatus