EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020016116 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 3934 bases
Position: chr23:13646595-13650528
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020015114	zf-C2H2	PF00096.26	2e-16	1	2
ENSORLP00020015114	zf-C2H2	PF00096.26	2e-16	2	2
ENSORLP00020015114	zf-met	PF12874.7	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020033316	-	2574	-	ENSORLP00020015114	622 (aa)	-	-

Gene Model

Click here to download ENSORLG00020016116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020016116's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020016116	-	55	41.921	ENSORLG00020009419	-	85	47.253
ENSORLG00020016116	-	95	38.057	ENSORLG00020008744	-	94	38.057
ENSORLG00020016116	-	53	38.914	ENSORLG00020010950	-	97	45.122
ENSORLG00020016116	-	53	43.195	ENSORLG00020009089	-	53	43.195
ENSORLG00020016116	-	69	45.000	ENSORLG00020009943	-	97	45.000
ENSORLG00020016116	-	53	39.207	ENSORLG00020009139	-	98	40.104
ENSORLG00020016116	-	53	37.168	ENSORLG00020018051	prdm5	68	37.168
ENSORLG00020016116	-	50	40.800	ENSORLG00020010171	-	87	46.939
ENSORLG00020016116	-	51	37.647	ENSORLG00020017076	si:ch211-216l23.1	75	37.647
ENSORLG00020016116	-	53	39.655	ENSORLG00020010804	-	95	45.695

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020016116	-	59	40.351	ENSATEG00000024549	-	75	40.351	Anabas_testudineus
ENSORLG00020016116	-	99	62.520	ENSGAFG00000016139	-	99	62.520	Gambusia_affinis
ENSORLG00020016116	-	50	40.741	ENSIPUG00000009577	-	60	40.741	Ictalurus_punctatus
ENSORLG00020016116	-	54	63.824	ENSMALG00000014761	-	98	63.824	Monopterus_albus
ENSORLG00020016116	-	100	97.749	ENSORLG00000014311	-	100	97.749	Oryzias_latipes
ENSORLG00020016116	-	100	97.428	ENSORLG00015014797	-	100	97.428	Oryzias_latipes_hsok
ENSORLG00020016116	-	53	33.659	ENSOMEG00000015640	-	71	35.885	Oryzias_melastigma
ENSORLG00020016116	-	96	64.407	ENSPFOG00000004204	-	99	61.006	Poecilia_formosa
ENSORLG00020016116	-	99	62.360	ENSPLAG00000022088	-	93	62.360	Poecilia_latipinna
ENSORLG00020016116	-	99	62.679	ENSPMEG00000001411	-	93	62.679	Poecilia_mexicana
ENSORLG00020016116	-	99	62.998	ENSPREG00000004161	-	99	62.998	Poecilia_reticulata
ENSORLG00020016116	-	96	62.211	ENSPNYG00000020534	-	99	62.211	Pundamilia_nyererei
ENSORLG00020016116	-	62	38.785	ENSPNYG00000019187	-	74	41.317	Pundamilia_nyererei
ENSORLG00020016116	-	99	62.360	ENSXMAG00000011035	-	99	62.360	Xiphophorus_maculatus