EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020016139 (Gene tree)
Gene ID: -
Gene Symbol: rab34b
Alias: -
Full Name: RAB34%2C member RAS oncogene family b
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 7474 bases
Position: chr14:7538988-7546461
Accession: ZDB-GENE-091118-61
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020015110	MMR_HSR1	PF01926.23	6.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020033319	-	1921	-	ENSORLP00020015110	273 (aa)	-	-

Gene Model

Click here to download ENSORLG00020016139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020016139's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020016139	rab34b	59	37.267	ENSORLG00020000892	rab1ab	78	37.267
ENSORLG00020016139	rab34b	86	30.705	ENSORLG00020015717	-	94	30.705
ENSORLG00020016139	rab34b	59	38.509	ENSORLG00020000604	rab41	75	38.509
ENSORLG00020016139	rab34b	59	35.000	ENSORLG00020008388	rab5c	72	35.000
ENSORLG00020016139	rab34b	60	36.747	ENSORLG00020019269	RAB39B	77	36.747
ENSORLG00020016139	rab34b	67	37.234	ENSORLG00020012685	zgc:101559	80	37.234
ENSORLG00020016139	rab34b	63	33.333	ENSORLG00020020277	si:dkey-34d22.5	78	33.333
ENSORLG00020016139	rab34b	73	32.000	ENSORLG00020020922	rab5aa	89	32.000
ENSORLG00020016139	rab34b	59	37.888	ENSORLG00020013337	rab6bb	76	37.888
ENSORLG00020016139	rab34b	65	33.146	ENSORLG00020011590	rab18b	85	33.146
ENSORLG00020016139	rab34b	55	38.255	ENSORLG00020020220	rab23	70	42.177
ENSORLG00020016139	rab34b	66	36.170	ENSORLG00020010772	rab6ba	86	36.170
ENSORLG00020016139	rab34b	73	33.168	ENSORLG00020000867	si:dkey-16l2.16	94	33.168
ENSORLG00020016139	rab34b	63	34.483	ENSORLG00020013895	rab42a	79	34.483
ENSORLG00020016139	rab34b	61	37.725	ENSORLG00020018986	rab14	75	35.928
ENSORLG00020016139	rab34b	59	38.125	ENSORLG00020015288	rab30	77	38.125
ENSORLG00020016139	rab34b	59	39.130	ENSORLG00020001816	rab6a	80	39.130
ENSORLG00020016139	rab34b	56	30.323	ENSORLG00020000483	rab9a	76	30.323
ENSORLG00020016139	rab34b	61	35.329	ENSORLG00020018259	rab15	77	35.329
ENSORLG00020016139	rab34b	61	37.349	ENSORLG00020004905	RAB15	78	37.349
ENSORLG00020016139	rab34b	72	31.019	ENSORLG00020020811	rab25a	70	31.019
ENSORLG00020016139	rab34b	67	33.696	ENSORLG00020020816	rab11ba	78	33.696
ENSORLG00020016139	rab34b	60	35.152	ENSORLG00020020035	rab2a	76	35.152
ENSORLG00020016139	rab34b	59	40.244	ENSORLG00020021071	zgc:171927	74	40.244
ENSORLG00020016139	rab34b	59	38.125	ENSORLG00020009535	-	79	38.125
ENSORLG00020016139	rab34b	59	37.888	ENSORLG00020021697	-	78	37.888
ENSORLG00020016139	rab34b	70	31.053	ENSORLG00020008333	rab18a	89	31.053
ENSORLG00020016139	rab34b	62	34.320	ENSORLG00020005131	rab12	71	34.320
ENSORLG00020016139	rab34b	55	38.000	ENSORLG00020020266	rab33a	53	38.000
ENSORLG00020016139	rab34b	66	32.787	ENSORLG00020019465	si:dkey-13a21.4	88	32.787
ENSORLG00020016139	rab34b	57	30.128	ENSORLG00020021663	rab3db	70	30.128
ENSORLG00020016139	rab34b	92	67.315	ENSORLG00020010041	rab34a	97	67.315

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020016139	rab34b	79	87.907	ENSAPOG00000019147	rab34b	95	81.500	Acanthochromis_polyacanthus
ENSORLG00020016139	rab34b	92	75.794	ENSACIG00000004859	rab34b	99	75.794	Amphilophus_citrinellus
ENSORLG00020016139	rab34b	92	82.490	ENSAOCG00000007106	rab34b	94	82.490	Amphiprion_ocellaris
ENSORLG00020016139	rab34b	82	87.946	ENSAPEG00000018607	rab34b	86	84.167	Amphiprion_percula
ENSORLG00020016139	rab34b	86	82.278	ENSATEG00000006851	rab34b	94	82.278	Anabas_testudineus
ENSORLG00020016139	rab34b	96	84.906	ENSACLG00000005733	rab34b	99	84.906	Astatotilapia_calliptera
ENSORLG00020016139	rab34b	92	71.260	ENSAMXG00000006018	rab34b	99	71.260	Astyanax_mexicanus
ENSORLG00020016139	rab34b	86	81.780	ENSCSEG00000018133	rab34b	94	81.780	Cynoglossus_semilaevis
ENSORLG00020016139	rab34b	92	72.619	ENSDARG00000010977	rab34b	98	72.619	Danio_rerio
ENSORLG00020016139	rab34b	93	79.377	ENSELUG00000005597	rab34b	99	79.377	Esox_lucius
ENSORLG00020016139	rab34b	92	84.646	ENSFHEG00000004532	rab34b	100	84.646	Fundulus_heteroclitus
ENSORLG00020016139	rab34b	75	80.097	ENSGMOG00000007140	rab34b	100	80.097	Gadus_morhua
ENSORLG00020016139	rab34b	92	84.375	ENSGACG00000020514	rab34b	99	84.375	Gasterosteus_aculeatus
ENSORLG00020016139	rab34b	92	71.146	ENSIPUG00000024531	rab34	98	71.146	Ictalurus_punctatus
ENSORLG00020016139	rab34b	92	86.220	ENSKMAG00000019341	rab34b	100	86.220	Kryptolebias_marmoratus
ENSORLG00020016139	rab34b	92	83.333	ENSLBEG00000027819	rab34b	100	83.333	Labrus_bergylta
ENSORLG00020016139	rab34b	92	84.524	ENSMAMG00000020214	rab34b	100	84.524	Mastacembelus_armatus
ENSORLG00020016139	rab34b	99	79.412	ENSMMOG00000010936	rab34b	93	79.412	Mola_mola
ENSORLG00020016139	rab34b	86	82.700	ENSMALG00000018499	rab34b	89	82.700	Monopterus_albus
ENSORLG00020016139	rab34b	92	86.614	ENSONIG00000005519	rab34b	100	86.614	Oreochromis_niloticus
ENSORLG00020016139	rab34b	100	97.802	ENSORLG00000003119	rab34b	100	97.802	Oryzias_latipes
ENSORLG00020016139	rab34b	100	98.168	ENSORLG00015000584	rab34b	100	98.168	Oryzias_latipes_hsok
ENSORLG00020016139	rab34b	94	98.054	ENSOMEG00000010334	rab34b	98	97.500	Oryzias_melastigma
ENSORLG00020016139	rab34b	92	71.484	ENSPKIG00000013326	rab34b	99	71.484	Paramormyrops_kingsleyae
ENSORLG00020016139	rab34b	92	81.961	ENSPMGG00000021697	rab34b	99	81.961	Periophthalmus_magnuspinnatus
ENSORLG00020016139	rab34b	92	85.098	ENSPFOG00000011444	rab34b	100	85.098	Poecilia_formosa
ENSORLG00020016139	rab34b	92	85.039	ENSPLAG00000005074	rab34b	100	85.039	Poecilia_latipinna
ENSORLG00020016139	rab34b	92	85.039	ENSPMEG00000013297	rab34b	100	85.039	Poecilia_mexicana
ENSORLG00020016139	rab34b	92	85.039	ENSPREG00000009813	rab34b	100	85.039	Poecilia_reticulata
ENSORLG00020016139	rab34b	96	76.336	ENSPNYG00000017153	rab34b	99	91.525	Pundamilia_nyererei
ENSORLG00020016139	rab34b	84	73.077	ENSPNAG00000015040	rab34b	98	73.077	Pygocentrus_nattereri
ENSORLG00020016139	rab34b	92	71.595	ENSSFOG00015005188	rab34	99	71.595	Scleropages_formosus
ENSORLG00020016139	rab34b	90	81.781	ENSSMAG00000019926	rab34b	100	82.906	Scophthalmus_maximus
ENSORLG00020016139	rab34b	92	87.500	ENSSDUG00000016760	rab34b	80	87.500	Seriola_dumerili
ENSORLG00020016139	rab34b	67	91.304	ENSSLDG00000014812	rab34b	90	91.304	Seriola_lalandi_dorsalis
ENSORLG00020016139	rab34b	92	84.252	ENSSPAG00000002801	rab34b	100	84.252	Stegastes_partitus
ENSORLG00020016139	rab34b	88	82.988	ENSTRUG00000014481	rab34b	98	82.988	Takifugu_rubripes
ENSORLG00020016139	rab34b	92	80.469	ENSTNIG00000016158	rab34b	99	80.469	Tetraodon_nigroviridis