EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020016179 (Gene tree)
Gene ID: -
Gene Symbol: RBPMS
Alias: -
Full Name: RNA binding protein%2C mRNA processing factor
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 36640 bases
Position: chr18:7050730-7087369
Accession: 19097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020015172	RRM_1	PF00076.22	3e-11	1	1
ENSORLP00020015168	RRM_1	PF00076.22	3.4e-11	1	1
ENSORLP00020015158	RRM_1	PF00076.22	3.7e-11	1	1
ENSORLP00020015145	RRM_1	PF00076.22	2.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020023124	RBPMS-203	592	-	ENSORLP00020015172	194 (aa)	-	-
ENSORLT00020023085	RBPMS-201	561	-	ENSORLP00020015145	186 (aa)	-	-
ENSORLT00020033337	RBPMS-204	1479	-	ENSORLP00020015158	207 (aa)	-	-
ENSORLT00020023109	RBPMS-202	618	-	ENSORLP00020015168	205 (aa)	-	-

Gene Model

Click here to download ENSORLG00020016179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020016179's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020016179	RBPMS	97	68.367	ENSORLG00020001166	rbpms2b	74	70.408

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020016179	RBPMS	100	84.184	ENSG00000157110	RBPMS	100	84.184	Homo_sapiens
ENSORLG00020016179	RBPMS	100	97.423	ENSAPOG00000022304	RBPMS	100	97.423	Acanthochromis_polyacanthus
ENSORLG00020016179	RBPMS	84	85.366	ENSAMEG00000001522	RBPMS	75	85.366	Ailuropoda_melanoleuca
ENSORLG00020016179	RBPMS	70	85.294	ENSACIG00000011395	RBPMS	77	82.639	Amphilophus_citrinellus
ENSORLG00020016179	RBPMS	100	97.423	ENSAOCG00000007731	RBPMS	100	97.423	Amphiprion_ocellaris
ENSORLG00020016179	RBPMS	100	97.423	ENSAPEG00000023543	RBPMS	100	97.423	Amphiprion_percula
ENSORLG00020016179	RBPMS	100	97.423	ENSATEG00000018184	RBPMS	100	97.423	Anabas_testudineus
ENSORLG00020016179	RBPMS	100	83.163	ENSACAG00000003012	RBPMS	100	81.633	Anolis_carolinensis
ENSORLG00020016179	RBPMS	100	84.184	ENSANAG00000028150	RBPMS	100	84.184	Aotus_nancymaae
ENSORLG00020016179	RBPMS	100	98.454	ENSACLG00000002926	RBPMS	100	98.454	Astatotilapia_calliptera
ENSORLG00020016179	RBPMS	99	91.667	ENSAMXG00000033491	rbpms	99	91.667	Astyanax_mexicanus
ENSORLG00020016179	RBPMS	100	83.673	ENSBTAG00000033727	RBPMS	81	84.181	Bos_taurus
ENSORLG00020016179	RBPMS	100	84.184	ENSCJAG00000012366	RBPMS	100	84.184	Callithrix_jacchus
ENSORLG00020016179	RBPMS	90	84.746	ENSCAFG00000006503	RBPMS	81	84.746	Canis_familiaris
ENSORLG00020016179	RBPMS	90	84.746	ENSCAFG00020001031	RBPMS	81	84.746	Canis_lupus_dingo
ENSORLG00020016179	RBPMS	100	77.665	ENSCHIG00000027156	RBPMS	100	77.665	Capra_hircus
ENSORLG00020016179	RBPMS	57	90.000	ENSTSYG00000013982	RBPMS	83	90.000	Carlito_syrichta
ENSORLG00020016179	RBPMS	100	84.184	ENSCPOG00000038597	RBPMS	100	84.184	Cavia_porcellus
ENSORLG00020016179	RBPMS	100	84.184	ENSCCAG00000033226	RBPMS	100	84.184	Cebus_capucinus
ENSORLG00020016179	RBPMS	100	84.184	ENSCATG00000036486	RBPMS	100	84.184	Cercocebus_atys
ENSORLG00020016179	RBPMS	89	87.356	ENSCLAG00000001518	RBPMS	100	87.356	Chinchilla_lanigera
ENSORLG00020016179	RBPMS	90	84.746	ENSCSAG00000015838	RBPMS	81	84.746	Chlorocebus_sabaeus
ENSORLG00020016179	RBPMS	79	88.387	ENSCHOG00000008745	RBPMS	79	88.387	Choloepus_hoffmanni
ENSORLG00020016179	RBPMS	100	81.538	ENSCPBG00000013437	RBPMS	100	81.538	Chrysemys_picta_bellii
ENSORLG00020016179	RBPMS	89	87.356	ENSCANG00000034997	RBPMS	100	87.356	Colobus_angolensis_palliatus
ENSORLG00020016179	RBPMS	99	78.974	ENSCGRG00001002814	Rbpms	99	83.077	Cricetulus_griseus_chok1gshd
ENSORLG00020016179	RBPMS	89	82.286	ENSCGRG00000006095	Rbpms	100	86.857	Cricetulus_griseus_crigri
ENSORLG00020016179	RBPMS	100	96.392	ENSCSEG00000002777	rbpms	100	96.392	Cynoglossus_semilaevis
ENSORLG00020016179	RBPMS	100	97.423	ENSCVAG00000013975	RBPMS	100	97.423	Cyprinodon_variegatus
ENSORLG00020016179	RBPMS	87	71.006	ENSDARG00000099396	rbpms	100	71.006	Danio_rerio
ENSORLG00020016179	RBPMS	90	83.616	ENSDNOG00000008126	RBPMS	81	83.616	Dasypus_novemcinctus
ENSORLG00020016179	RBPMS	90	85.311	ENSETEG00000017582	RBPMS	81	85.311	Echinops_telfairi
ENSORLG00020016179	RBPMS	79	88.387	ENSEASG00005016962	RBPMS	78	88.387	Equus_asinus_asinus
ENSORLG00020016179	RBPMS	90	84.746	ENSECAG00000020735	RBPMS	78	88.387	Equus_caballus
ENSORLG00020016179	RBPMS	100	92.784	ENSELUG00000009787	rbpms	100	92.784	Esox_lucius
ENSORLG00020016179	RBPMS	100	84.184	ENSFCAG00000025639	-	100	84.184	Felis_catus
ENSORLG00020016179	RBPMS	88	52.907	ENSFCAG00000022292	-	93	47.959	Felis_catus
ENSORLG00020016179	RBPMS	89	87.356	ENSFDAG00000012078	RBPMS	100	87.356	Fukomys_damarensis
ENSORLG00020016179	RBPMS	100	96.907	ENSFHEG00000000618	rbpms	100	96.907	Fundulus_heteroclitus
ENSORLG00020016179	RBPMS	77	60.667	ENSGMOG00000009646	-	100	60.667	Gadus_morhua
ENSORLG00020016179	RBPMS	100	97.938	ENSGAFG00000016566	RBPMS	100	97.938	Gambusia_affinis
ENSORLG00020016179	RBPMS	100	86.598	ENSGACG00000019471	rbpms	100	86.598	Gasterosteus_aculeatus
ENSORLG00020016179	RBPMS	59	86.087	ENSGAGG00000023634	RBPMS	55	81.890	Gopherus_agassizii
ENSORLG00020016179	RBPMS	100	98.454	ENSHBUG00000005888	RBPMS	100	98.454	Haplochromis_burtoni
ENSORLG00020016179	RBPMS	100	84.184	ENSHGLG00000002303	RBPMS	100	84.184	Heterocephalus_glaber_female
ENSORLG00020016179	RBPMS	89	87.356	ENSHGLG00100008787	RBPMS	100	87.356	Heterocephalus_glaber_male
ENSORLG00020016179	RBPMS	98	97.382	ENSHCOG00000005774	rbpms	99	97.382	Hippocampus_comes
ENSORLG00020016179	RBPMS	97	87.895	ENSIPUG00000012459	RBPMS	99	87.895	Ictalurus_punctatus
ENSORLG00020016179	RBPMS	100	84.184	ENSSTOG00000026546	RBPMS	100	84.184	Ictidomys_tridecemlineatus
ENSORLG00020016179	RBPMS	100	84.184	ENSJJAG00000014024	Rbpms	100	84.184	Jaculus_jaculus
ENSORLG00020016179	RBPMS	89	79.545	ENSKMAG00000006377	RBPMS	93	78.261	Kryptolebias_marmoratus
ENSORLG00020016179	RBPMS	100	97.423	ENSLBEG00000027989	RBPMS	100	97.423	Labrus_bergylta
ENSORLG00020016179	RBPMS	90	92.571	ENSLOCG00000013199	RBPMS	96	93.143	Lepisosteus_oculatus
ENSORLG00020016179	RBPMS	90	84.746	ENSLAFG00000000209	RBPMS	81	84.746	Loxodonta_africana
ENSORLG00020016179	RBPMS	100	84.184	ENSMFAG00000036911	RBPMS	100	84.184	Macaca_fascicularis
ENSORLG00020016179	RBPMS	100	84.184	ENSMMUG00000000458	RBPMS	100	84.184	Macaca_mulatta
ENSORLG00020016179	RBPMS	100	84.184	ENSMNEG00000043805	RBPMS	100	84.184	Macaca_nemestrina
ENSORLG00020016179	RBPMS	89	87.356	ENSMLEG00000015635	RBPMS	100	87.356	Mandrillus_leucophaeus
ENSORLG00020016179	RBPMS	95	76.216	ENSMAMG00000004604	RBPMS	94	76.216	Mastacembelus_armatus
ENSORLG00020016179	RBPMS	100	98.454	ENSMZEG00005000698	RBPMS	100	98.454	Maylandia_zebra
ENSORLG00020016179	RBPMS	90	85.714	ENSMGAG00000005088	RBPMS	90	85.714	Meleagris_gallopavo
ENSORLG00020016179	RBPMS	99	78.974	ENSMAUG00000018892	Rbpms	99	83.077	Mesocricetus_auratus
ENSORLG00020016179	RBPMS	100	79.592	ENSMICG00000001295	RBPMS	100	83.163	Microcebus_murinus
ENSORLG00020016179	RBPMS	99	78.974	ENSMOCG00000014009	Rbpms	99	83.077	Microtus_ochrogaster
ENSORLG00020016179	RBPMS	82	94.969	ENSMMOG00000012036	RBPMS	67	95.570	Mola_mola
ENSORLG00020016179	RBPMS	97	84.127	ENSMODG00000019006	RBPMS	92	81.959	Monodelphis_domestica
ENSORLG00020016179	RBPMS	100	95.876	ENSMALG00000003261	RBPMS	100	95.876	Monopterus_albus
ENSORLG00020016179	RBPMS	99	78.462	MGP_CAROLIEiJ_G0030970	Rbpms	99	82.564	Mus_caroli
ENSORLG00020016179	RBPMS	99	78.462	ENSMUSG00000031586	Rbpms	99	82.564	Mus_musculus
ENSORLG00020016179	RBPMS	100	78.680	MGP_PahariEiJ_G0021439	Rbpms	100	82.741	Mus_pahari
ENSORLG00020016179	RBPMS	99	78.462	MGP_SPRETEiJ_G0032087	Rbpms	99	82.564	Mus_spretus
ENSORLG00020016179	RBPMS	84	85.366	ENSMPUG00000011314	RBPMS	75	85.366	Mustela_putorius_furo
ENSORLG00020016179	RBPMS	100	83.673	ENSMLUG00000009391	RBPMS	100	84.810	Myotis_lucifugus
ENSORLG00020016179	RBPMS	90	84.746	ENSNGAG00000011141	Rbpms	81	84.746	Nannospalax_galili
ENSORLG00020016179	RBPMS	90	98.851	ENSNBRG00000003313	RBPMS	97	99.425	Neolamprologus_brichardi
ENSORLG00020016179	RBPMS	100	83.673	ENSNLEG00000036183	-	99	83.505	Nomascus_leucogenys
ENSORLG00020016179	RBPMS	68	84.848	ENSOPRG00000013151	RBPMS	60	84.848	Ochotona_princeps
ENSORLG00020016179	RBPMS	100	84.184	ENSODEG00000006700	RBPMS	100	84.184	Octodon_degus
ENSORLG00020016179	RBPMS	90	98.851	ENSONIG00000007546	RBPMS	100	98.851	Oreochromis_niloticus
ENSORLG00020016179	RBPMS	90	84.746	ENSOCUG00000008572	RBPMS	81	84.746	Oryctolagus_cuniculus
ENSORLG00020016179	RBPMS	100	99.512	ENSORLG00000004135	-	100	99.512	Oryzias_latipes
ENSORLG00020016179	RBPMS	100	100.000	ENSORLG00015013770	RBPMS	100	100.000	Oryzias_latipes_hsok
ENSORLG00020016179	RBPMS	100	97.938	ENSOMEG00000005044	RBPMS	100	97.938	Oryzias_melastigma
ENSORLG00020016179	RBPMS	92	83.425	ENSOGAG00000030298	RBPMS	81	83.425	Otolemur_garnettii
ENSORLG00020016179	RBPMS	65	83.333	ENSOARG00000010366	RBPMS	89	83.333	Ovis_aries
ENSORLG00020016179	RBPMS	89	87.356	ENSPPAG00000033108	RBPMS	100	87.356	Pan_paniscus
ENSORLG00020016179	RBPMS	100	84.184	ENSPPRG00000004836	RBPMS	100	84.184	Panthera_pardus
ENSORLG00020016179	RBPMS	89	87.356	ENSPTIG00000015964	RBPMS	89	87.356	Panthera_tigris_altaica
ENSORLG00020016179	RBPMS	100	84.184	ENSPTRG00000020135	RBPMS	100	84.184	Pan_troglodytes
ENSORLG00020016179	RBPMS	100	84.184	ENSPANG00000008143	RBPMS	100	84.184	Papio_anubis
ENSORLG00020016179	RBPMS	100	91.237	ENSPKIG00000000535	-	100	91.237	Paramormyrops_kingsleyae
ENSORLG00020016179	RBPMS	97	89.362	ENSPKIG00000004836	rbpms	99	89.362	Paramormyrops_kingsleyae
ENSORLG00020016179	RBPMS	89	85.632	ENSPSIG00000006136	RBPMS	99	85.632	Pelodiscus_sinensis
ENSORLG00020016179	RBPMS	81	96.835	ENSPMGG00000018012	RBPMS	74	96.835	Periophthalmus_magnuspinnatus
ENSORLG00020016179	RBPMS	99	79.082	ENSPEMG00000021130	Rbpms	99	82.653	Peromyscus_maniculatus_bairdii
ENSORLG00020016179	RBPMS	90	86.364	ENSPCIG00000019298	-	71	82.456	Phascolarctos_cinereus
ENSORLG00020016179	RBPMS	100	97.938	ENSPFOG00000017158	RBPMS	100	97.938	Poecilia_formosa
ENSORLG00020016179	RBPMS	100	97.938	ENSPLAG00000010767	RBPMS	100	97.938	Poecilia_latipinna
ENSORLG00020016179	RBPMS	100	97.938	ENSPMEG00000009788	RBPMS	100	97.938	Poecilia_mexicana
ENSORLG00020016179	RBPMS	100	97.938	ENSPREG00000016959	RBPMS	100	97.938	Poecilia_reticulata
ENSORLG00020016179	RBPMS	90	84.746	ENSPPYG00000018487	RBPMS	81	84.746	Pongo_abelii
ENSORLG00020016179	RBPMS	57	90.000	ENSPCAG00000013493	-	100	90.000	Procavia_capensis
ENSORLG00020016179	RBPMS	92	69.061	ENSPCOG00000015948	RBPMS	75	85.385	Propithecus_coquereli
ENSORLG00020016179	RBPMS	90	84.746	ENSPVAG00000001661	RBPMS	81	84.746	Pteropus_vampyrus
ENSORLG00020016179	RBPMS	100	98.454	ENSPNYG00000001172	RBPMS	100	98.454	Pundamilia_nyererei
ENSORLG00020016179	RBPMS	99	94.792	ENSPNAG00000029160	RBPMS	99	94.792	Pygocentrus_nattereri
ENSORLG00020016179	RBPMS	92	78.022	ENSRNOG00000013328	Rbpms	88	82.418	Rattus_norvegicus
ENSORLG00020016179	RBPMS	89	87.356	ENSRBIG00000038218	RBPMS	100	87.356	Rhinopithecus_bieti
ENSORLG00020016179	RBPMS	100	84.184	ENSRROG00000042518	RBPMS	100	84.184	Rhinopithecus_roxellana
ENSORLG00020016179	RBPMS	100	83.673	ENSSBOG00000026670	RBPMS	100	83.673	Saimiri_boliviensis_boliviensis
ENSORLG00020016179	RBPMS	91	85.955	ENSSHAG00000010114	RBPMS	92	85.955	Sarcophilus_harrisii
ENSORLG00020016179	RBPMS	90	90.230	ENSSFOG00015017481	-	99	86.702	Scleropages_formosus
ENSORLG00020016179	RBPMS	100	89.691	ENSSFOG00015000417	rbpms	100	89.691	Scleropages_formosus
ENSORLG00020016179	RBPMS	100	96.907	ENSSMAG00000010871	rbpms	100	96.907	Scophthalmus_maximus
ENSORLG00020016179	RBPMS	100	97.938	ENSSDUG00000010894	RBPMS	100	97.938	Seriola_dumerili
ENSORLG00020016179	RBPMS	100	97.938	ENSSLDG00000012916	RBPMS	100	97.938	Seriola_lalandi_dorsalis
ENSORLG00020016179	RBPMS	90	80.226	ENSSARG00000000274	RBPMS	81	80.226	Sorex_araneus
ENSORLG00020016179	RBPMS	94	82.609	ENSSPUG00000017525	RBPMS	71	83.243	Sphenodon_punctatus
ENSORLG00020016179	RBPMS	89	77.457	ENSSPAG00000004777	rbpms	82	94.074	Stegastes_partitus
ENSORLG00020016179	RBPMS	100	84.184	ENSSSCG00000015846	RBPMS	100	84.184	Sus_scrofa
ENSORLG00020016179	RBPMS	97	81.579	ENSTGUG00000001776	RBPMS	100	81.579	Taeniopygia_guttata
ENSORLG00020016179	RBPMS	100	95.361	ENSTRUG00000000041	RBPMS	100	95.361	Takifugu_rubripes
ENSORLG00020016179	RBPMS	90	84.659	ENSTTRG00000012451	RBPMS	81	84.659	Tursiops_truncatus
ENSORLG00020016179	RBPMS	60	86.207	ENSUAMG00000026353	RBPMS	76	86.207	Ursus_americanus
ENSORLG00020016179	RBPMS	85	86.061	ENSUMAG00000007347	RBPMS	76	88.462	Ursus_maritimus
ENSORLG00020016179	RBPMS	79	88.387	ENSVPAG00000010991	RBPMS	79	88.387	Vicugna_pacos
ENSORLG00020016179	RBPMS	100	84.184	ENSVVUG00000019770	RBPMS	100	84.184	Vulpes_vulpes
ENSORLG00020016179	RBPMS	89	88.506	ENSXETG00000011290	rbpms	100	88.506	Xenopus_tropicalis
ENSORLG00020016179	RBPMS	91	98.824	ENSXCOG00000002436	RBPMS	89	98.824	Xiphophorus_couchianus
ENSORLG00020016179	RBPMS	100	97.938	ENSXMAG00000027637	RBPMS	100	97.938	Xiphophorus_maculatus