EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020016246 (Gene tree)
Gene ID: -
Gene Symbol: bms1
Alias: -
Full Name: BMS1 ribosome biogenesis factor
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 12330 bases
Position: chr19:20803732-20816061
Accession: ZDB-GENE-060720-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020015236	AARP2CN	PF08142.12	4.2e-32	1	1
ENSORLP00020031255	AARP2CN	PF08142.12	7.9e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020023312	-	2017	-	ENSORLP00020015236	629 (aa)	-	-
ENSORLT00020023122	-	3585	-	ENSORLP00020031255	1194 (aa)	-	-

Gene Model

Click here to download ENSORLG00020016246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020016246's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020016246	bms1	92	68.506	ENSG00000165733	BMS1	82	74.306	Homo_sapiens
ENSORLG00020016246	bms1	58	91.758	ENSAPOG00000020157	-	99	91.781	Acanthochromis_polyacanthus
ENSORLG00020016246	bms1	87	76.774	ENSAPOG00000002296	bms1	99	76.406	Acanthochromis_polyacanthus
ENSORLG00020016246	bms1	81	67.641	ENSAMEG00000016834	BMS1	88	68.182	Ailuropoda_melanoleuca
ENSORLG00020016246	bms1	99	75.929	ENSACIG00000002588	bms1	99	75.873	Amphilophus_citrinellus
ENSORLG00020016246	bms1	79	83.068	ENSAOCG00000018088	bms1	99	79.453	Amphiprion_ocellaris
ENSORLG00020016246	bms1	79	83.068	ENSAPEG00000014673	bms1	100	77.850	Amphiprion_percula
ENSORLG00020016246	bms1	99	76.244	ENSATEG00000023465	bms1	99	77.868	Anabas_testudineus
ENSORLG00020016246	bms1	95	61.712	ENSAPLG00000003759	BMS1	87	70.018	Anas_platyrhynchos
ENSORLG00020016246	bms1	82	64.232	ENSACAG00000004537	-	82	72.851	Anolis_carolinensis
ENSORLG00020016246	bms1	92	68.455	ENSANAG00000023432	BMS1	87	68.455	Aotus_nancymaae
ENSORLG00020016246	bms1	99	75.812	ENSACLG00000001294	bms1	99	75.410	Astatotilapia_calliptera
ENSORLG00020016246	bms1	92	75.321	ENSAMXG00000011236	bms1	91	75.801	Astyanax_mexicanus
ENSORLG00020016246	bms1	92	68.567	ENSBTAG00000012878	BMS1	87	69.381	Bos_taurus
ENSORLG00020016246	bms1	84	52.696	WBGene00022021	Y61A9LA.10	94	52.696	Caenorhabditis_elegans
ENSORLG00020016246	bms1	92	68.943	ENSCJAG00000021705	BMS1	87	69.168	Callithrix_jacchus
ENSORLG00020016246	bms1	92	68.994	ENSCAFG00000007114	BMS1	87	67.909	Canis_familiaris
ENSORLG00020016246	bms1	92	68.994	ENSCAFG00020025282	BMS1	87	67.909	Canis_lupus_dingo
ENSORLG00020016246	bms1	92	68.567	ENSCHIG00000023251	BMS1	82	73.502	Capra_hircus
ENSORLG00020016246	bms1	92	65.631	ENSCAPG00000008652	BMS1	82	71.889	Cavia_aperea
ENSORLG00020016246	bms1	92	66.990	ENSCPOG00000000502	BMS1	82	73.502	Cavia_porcellus
ENSORLG00020016246	bms1	92	58.795	ENSCCAG00000024969	-	78	58.987	Cebus_capucinus
ENSORLG00020016246	bms1	92	68.506	ENSCATG00000030625	-	85	71.111	Cercocebus_atys
ENSORLG00020016246	bms1	89	46.481	ENSCATG00000008695	-	69	59.243	Cercocebus_atys
ENSORLG00020016246	bms1	99	61.654	ENSCLAG00000002446	BMS1	87	67.915	Chinchilla_lanigera
ENSORLG00020016246	bms1	92	68.506	ENSCSAG00000011118	BMS1	87	68.893	Chlorocebus_sabaeus
ENSORLG00020016246	bms1	99	60.866	ENSCHOG00000011055	BMS1	87	68.567	Choloepus_hoffmanni
ENSORLG00020016246	bms1	98	65.607	ENSCPBG00000025581	BMS1	86	68.226	Chrysemys_picta_bellii
ENSORLG00020016246	bms1	82	62.406	ENSCING00000003181	-	97	60.095	Ciona_intestinalis
ENSORLG00020016246	bms1	73	54.118	ENSCSAVG00000004113	-	89	54.023	Ciona_savignyi
ENSORLG00020016246	bms1	92	68.994	ENSCANG00000011609	BMS1	87	69.218	Colobus_angolensis_palliatus
ENSORLG00020016246	bms1	98	61.837	ENSCGRG00001019461	Bms1	89	67.520	Cricetulus_griseus_chok1gshd
ENSORLG00020016246	bms1	98	61.837	ENSCGRG00000009016	Bms1	89	67.520	Cricetulus_griseus_crigri
ENSORLG00020016246	bms1	99	76.708	ENSCSEG00000002469	bms1	99	76.729	Cynoglossus_semilaevis
ENSORLG00020016246	bms1	99	77.640	ENSCVAG00000008371	bms1	52	84.058	Cyprinodon_variegatus
ENSORLG00020016246	bms1	100	71.099	ENSDARG00000054154	bms1	97	75.246	Danio_rerio
ENSORLG00020016246	bms1	92	67.585	ENSDNOG00000015761	BMS1	81	73.733	Dasypus_novemcinctus
ENSORLG00020016246	bms1	99	61.864	ENSDORG00000002982	Bms1	88	68.608	Dipodomys_ordii
ENSORLG00020016246	bms1	92	56.338	FBgn0036686	CG7728	58	42.817	Drosophila_melanogaster
ENSORLG00020016246	bms1	84	66.964	ENSETEG00000009554	BMS1	78	66.964	Echinops_telfairi
ENSORLG00020016246	bms1	81	67.188	ENSEASG00005006894	BMS1	88	68.659	Equus_asinus_asinus
ENSORLG00020016246	bms1	81	68.031	ENSECAG00000001358	BMS1	88	68.498	Equus_caballus
ENSORLG00020016246	bms1	99	71.906	ENSELUG00000001756	bms1	74	87.744	Esox_lucius
ENSORLG00020016246	bms1	99	61.717	ENSFCAG00000011220	BMS1	87	68.679	Felis_catus
ENSORLG00020016246	bms1	99	62.256	ENSFALG00000006882	BMS1	86	69.181	Ficedula_albicollis
ENSORLG00020016246	bms1	99	61.351	ENSFDAG00000001422	BMS1	82	73.041	Fukomys_damarensis
ENSORLG00020016246	bms1	99	78.460	ENSFHEG00000003367	bms1	99	77.905	Fundulus_heteroclitus
ENSORLG00020016246	bms1	99	70.515	ENSGMOG00000000718	bms1	97	77.456	Gadus_morhua
ENSORLG00020016246	bms1	99	61.128	ENSGALG00000002624	BMS1	81	73.733	Gallus_gallus
ENSORLG00020016246	bms1	67	86.698	ENSGAFG00000009067	bms1	84	85.550	Gambusia_affinis
ENSORLG00020016246	bms1	99	71.839	ENSGACG00000015334	bms1	90	81.410	Gasterosteus_aculeatus
ENSORLG00020016246	bms1	98	65.672	ENSGAGG00000003467	BMS1	89	67.949	Gopherus_agassizii
ENSORLG00020016246	bms1	99	76.036	ENSHBUG00000022628	bms1	52	80.868	Haplochromis_burtoni
ENSORLG00020016246	bms1	99	75.725	ENSHCOG00000017604	bms1	52	82.190	Hippocampus_comes
ENSORLG00020016246	bms1	99	68.818	ENSIPUG00000017855	bms1	50	77.033	Ictalurus_punctatus
ENSORLG00020016246	bms1	82	68.401	ENSSTOG00000015063	BMS1	88	68.689	Ictidomys_tridecemlineatus
ENSORLG00020016246	bms1	92	68.893	ENSJJAG00000017328	Bms1	88	68.241	Jaculus_jaculus
ENSORLG00020016246	bms1	82	77.500	ENSKMAG00000021982	bms1	65	77.220	Kryptolebias_marmoratus
ENSORLG00020016246	bms1	81	77.282	ENSLBEG00000028208	bms1	99	74.940	Labrus_bergylta
ENSORLG00020016246	bms1	99	66.414	ENSLACG00000001600	BMS1	81	76.601	Latimeria_chalumnae
ENSORLG00020016246	bms1	65	79.902	ENSLOCG00000012914	bms1	51	76.115	Lepisosteus_oculatus
ENSORLG00020016246	bms1	93	67.752	ENSLAFG00000006250	BMS1	87	67.915	Loxodonta_africana
ENSORLG00020016246	bms1	85	68.173	ENSMFAG00000037771	BMS1	96	67.653	Macaca_fascicularis
ENSORLG00020016246	bms1	82	63.434	ENSMMUG00000007426	-	78	64.000	Macaca_mulatta
ENSORLG00020016246	bms1	80	54.224	ENSMLEG00000029084	-	77	58.549	Mandrillus_leucophaeus
ENSORLG00020016246	bms1	99	75.687	ENSMAMG00000020855	bms1	52	81.541	Mastacembelus_armatus
ENSORLG00020016246	bms1	99	75.760	ENSMZEG00005005663	bms1	99	74.918	Maylandia_zebra
ENSORLG00020016246	bms1	93	67.961	ENSMGAG00000001170	BMS1	80	74.211	Meleagris_gallopavo
ENSORLG00020016246	bms1	98	61.878	ENSMAUG00000002195	Bms1	89	67.840	Mesocricetus_auratus
ENSORLG00020016246	bms1	92	68.395	ENSMICG00000009977	BMS1	87	68.173	Microcebus_murinus
ENSORLG00020016246	bms1	92	67.794	ENSMOCG00000002038	Bms1	88	67.633	Microtus_ochrogaster
ENSORLG00020016246	bms1	99	78.340	ENSMMOG00000000977	bms1	99	77.759	Mola_mola
ENSORLG00020016246	bms1	99	63.964	ENSMODG00000001177	BMS1	81	73.923	Monodelphis_domestica
ENSORLG00020016246	bms1	99	76.433	ENSMALG00000009680	bms1	99	75.687	Monopterus_albus
ENSORLG00020016246	bms1	83	58.806	MGP_CAROLIEiJ_G0028785	-	75	76.441	Mus_caroli
ENSORLG00020016246	bms1	98	61.111	ENSMUSG00000030138	Bms1	88	66.774	Mus_musculus
ENSORLG00020016246	bms1	98	61.472	MGP_PahariEiJ_G0022539	Bms1	88	67.311	Mus_pahari
ENSORLG00020016246	bms1	98	60.849	MGP_SPRETEiJ_G0029816	Bms1	88	66.774	Mus_spretus
ENSORLG00020016246	bms1	81	68.279	ENSMPUG00000017276	BMS1	88	68.447	Mustela_putorius_furo
ENSORLG00020016246	bms1	99	60.928	ENSMLUG00000003260	BMS1	88	68.352	Myotis_lucifugus
ENSORLG00020016246	bms1	99	58.086	ENSNGAG00000015258	Bms1	85	68.618	Nannospalax_galili
ENSORLG00020016246	bms1	70	86.301	ENSNBRG00000023627	bms1	98	86.301	Neolamprologus_brichardi
ENSORLG00020016246	bms1	92	67.532	ENSNLEG00000015791	BMS1	85	69.184	Nomascus_leucogenys
ENSORLG00020016246	bms1	83	77.193	ENSOPRG00000005195	BMS1	79	77.250	Ochotona_princeps
ENSORLG00020016246	bms1	92	67.915	ENSODEG00000005554	BMS1	82	74.194	Octodon_degus
ENSORLG00020016246	bms1	99	77.048	ENSONIG00000007227	bms1	52	81.965	Oreochromis_niloticus
ENSORLG00020016246	bms1	99	61.496	ENSOANG00000000662	-	82	73.624	Ornithorhynchus_anatinus
ENSORLG00020016246	bms1	92	69.494	ENSOCUG00000005354	BMS1	87	69.109	Oryctolagus_cuniculus
ENSORLG00020016246	bms1	100	91.735	ENSORLG00000014655	bms1	100	91.735	Oryzias_latipes
ENSORLG00020016246	bms1	100	95.764	ENSORLG00015014183	bms1	100	95.764	Oryzias_latipes_hsok
ENSORLG00020016246	bms1	81	88.627	ENSOMEG00000015042	bms1	100	85.270	Oryzias_melastigma
ENSORLG00020016246	bms1	99	61.000	ENSOGAG00000006511	BMS1	87	68.558	Otolemur_garnettii
ENSORLG00020016246	bms1	95	68.730	ENSOARG00000003900	BMS1	89	69.707	Ovis_aries
ENSORLG00020016246	bms1	92	68.307	ENSPPAG00000027837	BMS1	81	74.074	Pan_paniscus
ENSORLG00020016246	bms1	99	61.967	ENSPPRG00000001311	BMS1	87	68.679	Panthera_pardus
ENSORLG00020016246	bms1	99	60.712	ENSPTIG00000009652	BMS1	87	67.976	Panthera_tigris_altaica
ENSORLG00020016246	bms1	92	69.044	ENSPTRG00000002441	BMS1	82	74.074	Pan_troglodytes
ENSORLG00020016246	bms1	95	73.885	ENSPKIG00000008165	bms1	88	75.835	Paramormyrops_kingsleyae
ENSORLG00020016246	bms1	92	68.566	ENSPSIG00000006481	BMS1	86	68.577	Pelodiscus_sinensis
ENSORLG00020016246	bms1	63	89.950	ENSPMGG00000012075	bms1	98	89.447	Periophthalmus_magnuspinnatus
ENSORLG00020016246	bms1	79	67.327	ENSPEMG00000022467	Bms1	87	66.864	Peromyscus_maniculatus_bairdii
ENSORLG00020016246	bms1	86	73.516	ENSPCIG00000001339	BMS1	81	73.243	Phascolarctos_cinereus
ENSORLG00020016246	bms1	99	75.848	ENSPFOG00000015180	bms1	99	75.818	Poecilia_formosa
ENSORLG00020016246	bms1	79	78.643	ENSPLAG00000007150	bms1	90	77.323	Poecilia_latipinna
ENSORLG00020016246	bms1	99	77.566	ENSPMEG00000023176	bms1	94	77.351	Poecilia_mexicana
ENSORLG00020016246	bms1	79	77.154	ENSPREG00000002695	bms1	99	76.860	Poecilia_reticulata
ENSORLG00020016246	bms1	81	66.731	ENSPPYG00000002836	-	71	73.016	Pongo_abelii
ENSORLG00020016246	bms1	75	76.871	ENSPCAG00000014528	BMS1	70	73.832	Procavia_capensis
ENSORLG00020016246	bms1	88	67.834	ENSPCOG00000023834	-	86	67.929	Propithecus_coquereli
ENSORLG00020016246	bms1	99	61.010	ENSPVAG00000000725	BMS1	82	73.148	Pteropus_vampyrus
ENSORLG00020016246	bms1	99	76.591	ENSPNYG00000018866	bms1	99	76.284	Pundamilia_nyererei
ENSORLG00020016246	bms1	81	66.990	ENSRNOG00000006576	Bms1	85	68.974	Rattus_norvegicus
ENSORLG00020016246	bms1	92	68.831	ENSRROG00000040101	BMS1	85	71.429	Rhinopithecus_roxellana
ENSORLG00020016246	bms1	79	48.513	YPL217C	-	83	48.387	Saccharomyces_cerevisiae
ENSORLG00020016246	bms1	92	69.268	ENSSBOG00000035778	BMS1	87	69.494	Saimiri_boliviensis_boliviensis
ENSORLG00020016246	bms1	93	67.370	ENSSHAG00000005062	BMS1	80	73.973	Sarcophilus_harrisii
ENSORLG00020016246	bms1	82	78.889	ENSSMAG00000019966	bms1	99	76.635	Scophthalmus_maximus
ENSORLG00020016246	bms1	82	79.699	ENSSDUG00000016875	bms1	90	78.662	Seriola_dumerili
ENSORLG00020016246	bms1	82	78.598	ENSSLDG00000015199	bms1	100	77.893	Seriola_lalandi_dorsalis
ENSORLG00020016246	bms1	95	67.690	ENSSPUG00000014454	BMS1	87	68.498	Sphenodon_punctatus
ENSORLG00020016246	bms1	92	68.555	ENSSSCG00000010198	BMS1	87	69.544	Sus_scrofa
ENSORLG00020016246	bms1	99	60.638	ENSTGUG00000006302	-	81	72.727	Taeniopygia_guttata
ENSORLG00020016246	bms1	99	70.981	ENSTRUG00000008028	bms1	52	76.059	Takifugu_rubripes
ENSORLG00020016246	bms1	95	75.367	ENSTNIG00000006216	bms1	83	79.587	Tetraodon_nigroviridis
ENSORLG00020016246	bms1	63	70.068	ENSTBEG00000001673	-	63	70.408	Tupaia_belangeri
ENSORLG00020016246	bms1	92	68.893	ENSTTRG00000007983	BMS1	79	77.834	Tursiops_truncatus
ENSORLG00020016246	bms1	81	68.493	ENSUAMG00000023996	BMS1	88	68.000	Ursus_americanus
ENSORLG00020016246	bms1	81	68.493	ENSUMAG00000016523	BMS1	88	68.123	Ursus_maritimus
ENSORLG00020016246	bms1	74	74.944	ENSVPAG00000007477	BMS1	79	74.725	Vicugna_pacos
ENSORLG00020016246	bms1	92	68.821	ENSVVUG00000021305	BMS1	87	67.909	Vulpes_vulpes
ENSORLG00020016246	bms1	98	61.483	ENSXETG00000008158	bms1	90	64.943	Xenopus_tropicalis
ENSORLG00020016246	bms1	99	78.469	ENSXCOG00000000506	bms1	99	86.364	Xiphophorus_couchianus
ENSORLG00020016246	bms1	99	76.987	ENSXMAG00000014236	bms1	99	77.351	Xiphophorus_maculatus