EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020016286 (Gene tree)
Gene ID: -
Gene Symbol: lsg1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 4670 bases
Position: chr4:12923916-12928585
Accession: ZDB-GENE-030131-2184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020015254	MMR_HSR1	PF01926.23	1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020023235	-	1851	-	ENSORLP00020015254	616 (aa)	-	-

Gene Model

Click here to download ENSORLG00020016286's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020016286's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020016286	lsg1	56	30.734	ENSORLG00020019295	gnl3l	56	34.270

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020016286	lsg1	99	63.166	ENSG00000041802	LSG1	90	76.398	Homo_sapiens
ENSORLG00020016286	lsg1	100	78.357	ENSAPOG00000009694	lsg1	99	78.720	Acanthochromis_polyacanthus
ENSORLG00020016286	lsg1	100	61.712	ENSAMEG00000009343	LSG1	98	61.868	Ailuropoda_melanoleuca
ENSORLG00020016286	lsg1	98	79.837	ENSACIG00000012406	lsg1	98	79.512	Amphilophus_citrinellus
ENSORLG00020016286	lsg1	100	78.233	ENSAOCG00000016066	lsg1	99	79.066	Amphiprion_ocellaris
ENSORLG00020016286	lsg1	100	79.022	ENSAPEG00000003252	lsg1	99	79.612	Amphiprion_percula
ENSORLG00020016286	lsg1	98	80.452	ENSATEG00000011794	lsg1	98	80.452	Anabas_testudineus
ENSORLG00020016286	lsg1	95	61.440	ENSACAG00000004222	LSG1	100	61.404	Anolis_carolinensis
ENSORLG00020016286	lsg1	99	63.293	ENSANAG00000021153	LSG1	98	63.721	Aotus_nancymaae
ENSORLG00020016286	lsg1	100	78.737	ENSACLG00000000520	lsg1	98	78.774	Astatotilapia_calliptera
ENSORLG00020016286	lsg1	100	69.432	ENSAMXG00000008271	lsg1	98	69.592	Astyanax_mexicanus
ENSORLG00020016286	lsg1	99	63.939	ENSBTAG00000008461	LSG1	98	65.047	Bos_taurus
ENSORLG00020016286	lsg1	83	33.769	WBGene00016907	C53H9.2	81	50.769	Caenorhabditis_elegans
ENSORLG00020016286	lsg1	99	63.444	ENSCJAG00000013962	LSG1	98	63.876	Callithrix_jacchus
ENSORLG00020016286	lsg1	95	63.009	ENSCAFG00000013445	LSG1	100	63.477	Canis_familiaris
ENSORLG00020016286	lsg1	100	61.573	ENSCAFG00020002216	LSG1	99	63.057	Canis_lupus_dingo
ENSORLG00020016286	lsg1	100	63.817	ENSCHIG00000015769	LSG1	98	64.455	Capra_hircus
ENSORLG00020016286	lsg1	99	61.991	ENSTSYG00000001447	LSG1	98	62.636	Carlito_syrichta
ENSORLG00020016286	lsg1	94	62.729	ENSCAPG00000009856	LSG1	99	62.336	Cavia_aperea
ENSORLG00020016286	lsg1	99	63.872	ENSCCAG00000035744	LSG1	98	64.319	Cebus_capucinus
ENSORLG00020016286	lsg1	99	63.636	ENSCATG00000042060	LSG1	98	62.539	Cercocebus_atys
ENSORLG00020016286	lsg1	99	63.166	ENSCSAG00000008796	LSG1	90	63.509	Chlorocebus_sabaeus
ENSORLG00020016286	lsg1	100	63.801	ENSCPBG00000015941	LSG1	82	64.154	Chrysemys_picta_bellii
ENSORLG00020016286	lsg1	84	49.140	ENSCING00000007079	-	97	49.412	Ciona_intestinalis
ENSORLG00020016286	lsg1	81	55.422	ENSCSAVG00000002514	-	95	55.794	Ciona_savignyi
ENSORLG00020016286	lsg1	99	62.100	ENSCANG00000030709	LSG1	98	63.043	Colobus_angolensis_palliatus
ENSORLG00020016286	lsg1	99	64.297	ENSCGRG00001019846	Lsg1	98	65.342	Cricetulus_griseus_chok1gshd
ENSORLG00020016286	lsg1	99	63.174	ENSCGRG00000014617	Lsg1	98	64.031	Cricetulus_griseus_crigri
ENSORLG00020016286	lsg1	98	76.442	ENSCSEG00000008522	lsg1	98	76.122	Cynoglossus_semilaevis
ENSORLG00020016286	lsg1	97	80.229	ENSCVAG00000002484	lsg1	98	80.650	Cyprinodon_variegatus
ENSORLG00020016286	lsg1	100	71.719	ENSDARG00000015352	lsg1	98	72.524	Danio_rerio
ENSORLG00020016286	lsg1	99	62.462	ENSDNOG00000006224	LSG1	98	63.256	Dasypus_novemcinctus
ENSORLG00020016286	lsg1	99	50.794	FBgn0266284	Ns3	98	50.567	Drosophila_melanogaster
ENSORLG00020016286	lsg1	87	74.667	ENSETEG00000003888	LSG1	87	80.645	Echinops_telfairi
ENSORLG00020016286	lsg1	88	57.491	ENSEBUG00000003119	lsg1	85	57.491	Eptatretus_burgeri
ENSORLG00020016286	lsg1	99	63.374	ENSEASG00005000678	LSG1	98	64.031	Equus_asinus_asinus
ENSORLG00020016286	lsg1	99	63.222	ENSECAG00000017659	LSG1	98	63.876	Equus_caballus
ENSORLG00020016286	lsg1	87	54.701	ENSEEUG00000015217	LSG1	85	54.701	Erinaceus_europaeus
ENSORLG00020016286	lsg1	100	72.540	ENSELUG00000023973	lsg1	98	71.656	Esox_lucius
ENSORLG00020016286	lsg1	100	61.619	ENSFCAG00000024957	LSG1	98	62.229	Felis_catus
ENSORLG00020016286	lsg1	92	62.136	ENSFALG00000007210	LSG1	94	62.136	Ficedula_albicollis
ENSORLG00020016286	lsg1	99	62.715	ENSFDAG00000017373	LSG1	98	62.739	Fukomys_damarensis
ENSORLG00020016286	lsg1	97	81.006	ENSFHEG00000003680	lsg1	98	81.099	Fundulus_heteroclitus
ENSORLG00020016286	lsg1	98	68.218	ENSGMOG00000015834	lsg1	98	68.539	Gadus_morhua
ENSORLG00020016286	lsg1	99	59.455	ENSGALG00000007058	LSG1	86	60.031	Gallus_gallus
ENSORLG00020016286	lsg1	97	82.781	ENSGAFG00000015831	lsg1	98	80.515	Gambusia_affinis
ENSORLG00020016286	lsg1	98	76.763	ENSGACG00000009323	lsg1	98	76.763	Gasterosteus_aculeatus
ENSORLG00020016286	lsg1	99	63.470	ENSGGOG00000000520	LSG1	98	63.820	Gorilla_gorilla
ENSORLG00020016286	lsg1	100	79.719	ENSHBUG00000005659	lsg1	98	79.777	Haplochromis_burtoni
ENSORLG00020016286	lsg1	99	63.208	ENSHGLG00000017390	LSG1	98	63.563	Heterocephalus_glaber_female
ENSORLG00020016286	lsg1	99	63.208	ENSHGLG00100018587	LSG1	98	63.563	Heterocephalus_glaber_male
ENSORLG00020016286	lsg1	97	78.191	ENSHCOG00000016848	lsg1	98	77.492	Hippocampus_comes
ENSORLG00020016286	lsg1	100	71.746	ENSIPUG00000008631	lsg1	98	71.753	Ictalurus_punctatus
ENSORLG00020016286	lsg1	72	59.623	ENSSTOG00000010234	LSG1	90	60.124	Ictidomys_tridecemlineatus
ENSORLG00020016286	lsg1	99	63.893	ENSJJAG00000015513	Lsg1	98	64.423	Jaculus_jaculus
ENSORLG00020016286	lsg1	98	78.084	ENSKMAG00000009681	lsg1	98	77.236	Kryptolebias_marmoratus
ENSORLG00020016286	lsg1	98	77.414	ENSLBEG00000024261	lsg1	98	78.069	Labrus_bergylta
ENSORLG00020016286	lsg1	100	65.060	ENSLACG00000013399	LSG1	98	65.131	Latimeria_chalumnae
ENSORLG00020016286	lsg1	98	70.912	ENSLOCG00000004918	lsg1	98	70.359	Lepisosteus_oculatus
ENSORLG00020016286	lsg1	99	63.553	ENSLAFG00000012919	-	98	64.929	Loxodonta_africana
ENSORLG00020016286	lsg1	99	63.182	ENSMFAG00000039903	LSG1	98	62.074	Macaca_fascicularis
ENSORLG00020016286	lsg1	99	63.182	ENSMMUG00000010708	LSG1	98	63.158	Macaca_mulatta
ENSORLG00020016286	lsg1	99	63.182	ENSMNEG00000031538	LSG1	98	62.229	Macaca_nemestrina
ENSORLG00020016286	lsg1	99	63.030	ENSMLEG00000041184	LSG1	98	63.313	Mandrillus_leucophaeus
ENSORLG00020016286	lsg1	100	78.309	ENSMAMG00000000470	lsg1	98	78.664	Mastacembelus_armatus
ENSORLG00020016286	lsg1	100	79.875	ENSMZEG00005017865	lsg1	98	79.936	Maylandia_zebra
ENSORLG00020016286	lsg1	88	61.329	ENSMGAG00000007050	LSG1	99	61.329	Meleagris_gallopavo
ENSORLG00020016286	lsg1	90	63.605	ENSMAUG00000016976	Lsg1	90	65.271	Mesocricetus_auratus
ENSORLG00020016286	lsg1	99	62.199	ENSMICG00000049087	LSG1	98	63.084	Microcebus_murinus
ENSORLG00020016286	lsg1	99	63.820	ENSMOCG00000022136	Lsg1	98	63.339	Microtus_ochrogaster
ENSORLG00020016286	lsg1	98	73.443	ENSMMOG00000008884	lsg1	98	75.738	Mola_mola
ENSORLG00020016286	lsg1	99	55.640	ENSMODG00000019828	LSG1	98	55.352	Monodelphis_domestica
ENSORLG00020016286	lsg1	100	63.820	MGP_CAROLIEiJ_G0020648	Lsg1	98	64.557	Mus_caroli
ENSORLG00020016286	lsg1	100	64.130	ENSMUSG00000022538	Lsg1	98	65.190	Mus_musculus
ENSORLG00020016286	lsg1	98	63.183	MGP_PahariEiJ_G0016352	Lsg1	98	63.994	Mus_pahari
ENSORLG00020016286	lsg1	100	64.496	MGP_SPRETEiJ_G0021544	Lsg1	98	64.873	Mus_spretus
ENSORLG00020016286	lsg1	100	62.671	ENSMPUG00000003734	LSG1	98	63.158	Mustela_putorius_furo
ENSORLG00020016286	lsg1	100	63.678	ENSMLUG00000012548	LSG1	98	64.062	Myotis_lucifugus
ENSORLG00020016286	lsg1	99	64.937	ENSNGAG00000021872	Lsg1	98	65.971	Nannospalax_galili
ENSORLG00020016286	lsg1	99	63.775	ENSNLEG00000008293	LSG1	98	63.876	Nomascus_leucogenys
ENSORLG00020016286	lsg1	69	69.072	ENSMEUG00000009041	-	83	69.072	Notamacropus_eugenii
ENSORLG00020016286	lsg1	100	78.173	ENSONIG00000002635	lsg1	98	78.673	Oreochromis_niloticus
ENSORLG00020016286	lsg1	95	66.343	ENSOANG00000012742	LSG1	99	65.961	Ornithorhynchus_anatinus
ENSORLG00020016286	lsg1	99	63.389	ENSOCUG00000004817	LSG1	98	63.256	Oryctolagus_cuniculus
ENSORLG00020016286	lsg1	100	97.240	ENSORLG00000007695	lsg1	100	97.240	Oryzias_latipes
ENSORLG00020016286	lsg1	100	95.779	ENSORLG00015012025	lsg1	100	95.779	Oryzias_latipes_hsok
ENSORLG00020016286	lsg1	98	90.344	ENSOMEG00000022379	lsg1	98	90.180	Oryzias_melastigma
ENSORLG00020016286	lsg1	99	61.631	ENSOGAG00000003475	LSG1	98	62.654	Otolemur_garnettii
ENSORLG00020016286	lsg1	100	62.991	ENSOARG00000020403	LSG1	98	63.750	Ovis_aries
ENSORLG00020016286	lsg1	99	63.318	ENSPPAG00000029271	LSG1	98	63.820	Pan_paniscus
ENSORLG00020016286	lsg1	100	60.831	ENSPPRG00000010281	LSG1	98	61.409	Panthera_pardus
ENSORLG00020016286	lsg1	100	61.619	ENSPTIG00000010789	LSG1	98	62.229	Panthera_tigris_altaica
ENSORLG00020016286	lsg1	99	63.166	ENSPTRG00000015760	LSG1	98	63.665	Pan_troglodytes
ENSORLG00020016286	lsg1	99	63.030	ENSPANG00000018249	LSG1	98	61.920	Papio_anubis
ENSORLG00020016286	lsg1	99	72.082	ENSPKIG00000002895	lsg1	98	72.742	Paramormyrops_kingsleyae
ENSORLG00020016286	lsg1	96	61.406	ENSPSIG00000009821	LSG1	99	61.514	Pelodiscus_sinensis
ENSORLG00020016286	lsg1	95	78.224	ENSPMGG00000000931	lsg1	100	78.057	Periophthalmus_magnuspinnatus
ENSORLG00020016286	lsg1	99	63.070	ENSPEMG00000012082	-	98	63.101	Peromyscus_maniculatus_bairdii
ENSORLG00020016286	lsg1	99	60.538	ENSPMAG00000007451	lsg1	98	60.518	Petromyzon_marinus
ENSORLG00020016286	lsg1	100	65.405	ENSPCIG00000013890	LSG1	78	65.405	Phascolarctos_cinereus
ENSORLG00020016286	lsg1	97	79.107	ENSPFOG00000021882	lsg1	98	79.266	Poecilia_formosa
ENSORLG00020016286	lsg1	97	80.421	ENSPLAG00000019536	lsg1	98	80.032	Poecilia_latipinna
ENSORLG00020016286	lsg1	97	78.855	ENSPMEG00000017281	lsg1	98	78.537	Poecilia_mexicana
ENSORLG00020016286	lsg1	97	69.586	ENSPREG00000006048	lsg1	98	69.889	Poecilia_reticulata
ENSORLG00020016286	lsg1	92	62.376	ENSPPYG00000014425	LSG1	98	62.901	Pongo_abelii
ENSORLG00020016286	lsg1	89	73.333	ENSPCAG00000005511	LSG1	88	79.032	Procavia_capensis
ENSORLG00020016286	lsg1	99	62.577	ENSPCOG00000012360	LSG1	98	63.067	Propithecus_coquereli
ENSORLG00020016286	lsg1	100	78.737	ENSPNYG00000021994	lsg1	98	78.774	Pundamilia_nyererei
ENSORLG00020016286	lsg1	100	72.075	ENSPNAG00000015533	lsg1	98	72.496	Pygocentrus_nattereri
ENSORLG00020016286	lsg1	100	62.367	ENSRNOG00000001727	Lsg1	98	63.764	Rattus_norvegicus
ENSORLG00020016286	lsg1	99	62.822	ENSRBIG00000029053	LSG1	98	62.675	Rhinopithecus_bieti
ENSORLG00020016286	lsg1	99	62.822	ENSRROG00000037702	LSG1	98	62.675	Rhinopithecus_roxellana
ENSORLG00020016286	lsg1	82	40.075	YGL099W	LSG1	70	41.851	Saccharomyces_cerevisiae
ENSORLG00020016286	lsg1	99	63.595	ENSSBOG00000034938	LSG1	98	63.876	Saimiri_boliviensis_boliviensis
ENSORLG00020016286	lsg1	77	60.496	ENSSHAG00000003487	LSG1	100	60.687	Sarcophilus_harrisii
ENSORLG00020016286	lsg1	98	71.451	ENSSFOG00015008955	lsg1	98	71.065	Scleropages_formosus
ENSORLG00020016286	lsg1	98	80.317	ENSSDUG00000004622	lsg1	98	80.317	Seriola_dumerili
ENSORLG00020016286	lsg1	98	82.276	ENSSLDG00000010869	lsg1	98	82.276	Seriola_lalandi_dorsalis
ENSORLG00020016286	lsg1	85	64.897	ENSSARG00000012981	LSG1	78	65.766	Sorex_araneus
ENSORLG00020016286	lsg1	100	64.438	ENSSPUG00000016347	LSG1	98	64.031	Sphenodon_punctatus
ENSORLG00020016286	lsg1	100	77.636	ENSSPAG00000005508	lsg1	99	78.339	Stegastes_partitus
ENSORLG00020016286	lsg1	100	62.538	ENSSSCG00000011827	LSG1	98	63.449	Sus_scrofa
ENSORLG00020016286	lsg1	88	59.631	ENSTGUG00000009068	LSG1	100	59.966	Taeniopygia_guttata
ENSORLG00020016286	lsg1	97	74.675	ENSTRUG00000017380	lsg1	98	74.475	Takifugu_rubripes
ENSORLG00020016286	lsg1	97	76.800	ENSTNIG00000015570	lsg1	98	76.911	Tetraodon_nigroviridis
ENSORLG00020016286	lsg1	100	60.184	ENSTTRG00000000559	LSG1	98	60.469	Tursiops_truncatus
ENSORLG00020016286	lsg1	100	62.085	ENSUAMG00000012454	LSG1	98	62.539	Ursus_americanus
ENSORLG00020016286	lsg1	100	62.085	ENSUMAG00000000855	LSG1	98	62.539	Ursus_maritimus
ENSORLG00020016286	lsg1	95	60.254	ENSVPAG00000012400	LSG1	100	60.480	Vicugna_pacos
ENSORLG00020016286	lsg1	95	62.975	ENSVVUG00000008956	LSG1	97	64.078	Vulpes_vulpes
ENSORLG00020016286	lsg1	100	65.948	ENSXETG00000003451	lsg1	98	66.559	Xenopus_tropicalis
ENSORLG00020016286	lsg1	97	80.844	ENSXCOG00000003239	lsg1	98	80.937	Xiphophorus_couchianus
ENSORLG00020016286	lsg1	97	81.054	ENSXMAG00000005536	lsg1	98	81.311	Xiphophorus_maculatus