EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020016319 (Gene tree)
Gene ID: -
Gene Symbol: thrap3b
Alias: -
Full Name: thyroid hormone receptor associated protein 3
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 14444 bases
Position: chr11:9689271-9703714
Accession: 101165078
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020015262	THRAP3_BCLAF1	PF15440.6	5.7e-134	1	2
ENSORLP00020015262	THRAP3_BCLAF1	PF15440.6	5.7e-134	2	2
ENSORLP00020015290	THRAP3_BCLAF1	PF15440.6	5.7e-134	1	2
ENSORLP00020015290	THRAP3_BCLAF1	PF15440.6	5.7e-134	2	2
ENSORLP00020031294	THRAP3_BCLAF1	PF15440.6	3.6e-120	1	2
ENSORLP00020031294	THRAP3_BCLAF1	PF15440.6	3.6e-120	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020023267	-	3847	XM_011481117	ENSORLP00020015290	884 (aa)	XP_011479419	-
ENSORLT00020023194	-	2535	-	ENSORLP00020031294	844 (aa)	-	-
ENSORLT00020023225	-	3732	XM_011481119	ENSORLP00020015262	884 (aa)	XP_011479421	-

Gene Model

Click here to download ENSORLG00020016319's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020016319's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020016319	thrap3b	93	35.162	ENSORLG00020019116	thrap3a	69	36.753

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020016319	thrap3b	91	39.145	ENSAPOG00000024453	thrap3a	82	39.221	Acanthochromis_polyacanthus
ENSORLG00020016319	thrap3b	94	74.733	ENSAPOG00000001848	thrap3b	94	76.631	Acanthochromis_polyacanthus
ENSORLG00020016319	thrap3b	78	72.571	ENSACIG00000015331	thrap3b	94	73.159	Amphilophus_citrinellus
ENSORLG00020016319	thrap3b	94	74.823	ENSAOCG00000015572	thrap3b	93	76.010	Amphiprion_ocellaris
ENSORLG00020016319	thrap3b	91	39.820	ENSAOCG00000014738	thrap3a	95	38.901	Amphiprion_ocellaris
ENSORLG00020016319	thrap3b	94	75.177	ENSAPEG00000021862	thrap3b	93	75.772	Amphiprion_percula
ENSORLG00020016319	thrap3b	91	39.754	ENSAPEG00000005696	thrap3a	95	38.583	Amphiprion_percula
ENSORLG00020016319	thrap3b	94	70.895	ENSATEG00000006350	thrap3b	93	71.347	Anabas_testudineus
ENSORLG00020016319	thrap3b	97	37.041	ENSATEG00000009618	thrap3a	82	37.971	Anabas_testudineus
ENSORLG00020016319	thrap3b	94	72.143	ENSACLG00000004763	thrap3b	93	75.445	Astatotilapia_calliptera
ENSORLG00020016319	thrap3b	94	39.251	ENSACLG00000027851	thrap3a	93	38.717	Astatotilapia_calliptera
ENSORLG00020016319	thrap3b	82	45.000	ENSAMXG00000001863	thrap3a	76	37.913	Astyanax_mexicanus
ENSORLG00020016319	thrap3b	94	46.448	ENSAMXG00000020877	thrap3b	99	48.018	Astyanax_mexicanus
ENSORLG00020016319	thrap3b	94	67.497	ENSCSEG00000010392	thrap3b	94	68.415	Cynoglossus_semilaevis
ENSORLG00020016319	thrap3b	94	73.412	ENSCVAG00000001547	thrap3b	93	74.113	Cyprinodon_variegatus
ENSORLG00020016319	thrap3b	76	48.889	ENSDARG00000101989	thrap3a	60	61.350	Danio_rerio
ENSORLG00020016319	thrap3b	91	51.566	ENSDARG00000098228	thrap3b	99	45.963	Danio_rerio
ENSORLG00020016319	thrap3b	91	56.556	ENSELUG00000007499	thrap3b	92	55.806	Esox_lucius
ENSORLG00020016319	thrap3b	94	43.034	ENSELUG00000017733	thrap3a	97	42.194	Esox_lucius
ENSORLG00020016319	thrap3b	77	64.286	ENSFALG00000000840	THRAP3	50	63.265	Ficedula_albicollis
ENSORLG00020016319	thrap3b	90	37.683	ENSFHEG00000000989	thrap3a	54	43.421	Fundulus_heteroclitus
ENSORLG00020016319	thrap3b	94	72.353	ENSFHEG00000001051	thrap3b	93	71.698	Fundulus_heteroclitus
ENSORLG00020016319	thrap3b	90	35.040	ENSGAFG00000008649	thrap3a	65	37.274	Gambusia_affinis
ENSORLG00020016319	thrap3b	53	70.231	ENSGAFG00000007090	thrap3b	87	70.265	Gambusia_affinis
ENSORLG00020016319	thrap3b	94	61.179	ENSGACG00000002319	thrap3b	93	60.845	Gasterosteus_aculeatus
ENSORLG00020016319	thrap3b	94	72.262	ENSHBUG00000001708	thrap3b	93	73.540	Haplochromis_burtoni
ENSORLG00020016319	thrap3b	98	39.045	ENSHBUG00000009602	thrap3a	96	39.056	Haplochromis_burtoni
ENSORLG00020016319	thrap3b	94	68.250	ENSHCOG00000004098	thrap3b	94	67.991	Hippocampus_comes
ENSORLG00020016319	thrap3b	93	46.903	ENSIPUG00000005707	thrap3b	93	46.421	Ictalurus_punctatus
ENSORLG00020016319	thrap3b	92	35.217	ENSIPUG00000015339	thrap3a	73	45.507	Ictalurus_punctatus
ENSORLG00020016319	thrap3b	94	74.389	ENSKMAG00000012105	thrap3b	93	73.857	Kryptolebias_marmoratus
ENSORLG00020016319	thrap3b	73	39.474	ENSLBEG00000008813	thrap3a	78	43.000	Labrus_bergylta
ENSORLG00020016319	thrap3b	94	69.668	ENSLBEG00000017803	thrap3b	93	70.178	Labrus_bergylta
ENSORLG00020016319	thrap3b	96	36.938	ENSMAMG00000007707	thrap3a	94	35.770	Mastacembelus_armatus
ENSORLG00020016319	thrap3b	94	66.392	ENSMAMG00000004348	thrap3b	93	66.509	Mastacembelus_armatus
ENSORLG00020016319	thrap3b	98	38.941	ENSMZEG00005007212	thrap3a	98	38.662	Maylandia_zebra
ENSORLG00020016319	thrap3b	94	71.344	ENSMZEG00005026309	thrap3b	93	75.416	Maylandia_zebra
ENSORLG00020016319	thrap3b	94	60.697	ENSMMOG00000013594	thrap3b	83	69.385	Mola_mola
ENSORLG00020016319	thrap3b	91	35.811	ENSMMOG00000018587	thrap3a	66	40.605	Mola_mola
ENSORLG00020016319	thrap3b	94	71.698	ENSMALG00000012582	thrap3b	93	70.401	Monopterus_albus
ENSORLG00020016319	thrap3b	84	56.667	ENSMALG00000011980	thrap3a	91	57.143	Monopterus_albus
ENSORLG00020016319	thrap3b	53	64.211	MGP_SPRETEiJ_G0027450	Thrap3	57	59.740	Mus_spretus
ENSORLG00020016319	thrap3b	93	71.712	ENSNBRG00000014237	thrap3b	97	73.095	Neolamprologus_brichardi
ENSORLG00020016319	thrap3b	98	39.271	ENSNBRG00000009991	thrap3a	98	39.327	Neolamprologus_brichardi
ENSORLG00020016319	thrap3b	92	39.069	ENSONIG00000016278	thrap3a	84	48.454	Oreochromis_niloticus
ENSORLG00020016319	thrap3b	78	71.121	ENSONIG00000013673	thrap3b	93	73.897	Oreochromis_niloticus
ENSORLG00020016319	thrap3b	100	98.984	ENSORLG00000009543	thrap3b	100	98.984	Oryzias_latipes
ENSORLG00020016319	thrap3b	93	35.834	ENSORLG00000014550	thrap3a	69	36.141	Oryzias_latipes
ENSORLG00020016319	thrap3b	93	35.347	ENSORLG00015004215	thrap3a	69	36.600	Oryzias_latipes_hsok
ENSORLG00020016319	thrap3b	100	99.097	ENSORLG00015007831	thrap3b	100	99.097	Oryzias_latipes_hsok
ENSORLG00020016319	thrap3b	71	35.897	ENSOMEG00000019164	thrap3a	70	37.191	Oryzias_melastigma
ENSORLG00020016319	thrap3b	94	93.165	ENSOMEG00000005716	thrap3b	94	92.446	Oryzias_melastigma
ENSORLG00020016319	thrap3b	73	48.352	ENSPKIG00000005150	thrap3a	96	45.806	Paramormyrops_kingsleyae
ENSORLG00020016319	thrap3b	82	85.000	ENSPMGG00000023429	thrap3b	81	84.211	Periophthalmus_magnuspinnatus
ENSORLG00020016319	thrap3b	94	72.393	ENSPFOG00000000525	thrap3b	94	72.242	Poecilia_formosa
ENSORLG00020016319	thrap3b	90	36.686	ENSPFOG00000013297	thrap3a	90	36.124	Poecilia_formosa
ENSORLG00020016319	thrap3b	90	36.560	ENSPLAG00000000635	thrap3a	90	35.465	Poecilia_latipinna
ENSORLG00020016319	thrap3b	94	72.512	ENSPLAG00000016521	thrap3b	94	72.361	Poecilia_latipinna
ENSORLG00020016319	thrap3b	90	36.333	ENSPMEG00000019022	thrap3a	76	36.501	Poecilia_mexicana
ENSORLG00020016319	thrap3b	94	72.533	ENSPMEG00000009021	thrap3b	94	72.857	Poecilia_mexicana
ENSORLG00020016319	thrap3b	94	74.052	ENSPREG00000009927	thrap3b	94	74.703	Poecilia_reticulata
ENSORLG00020016319	thrap3b	90	37.257	ENSPREG00000005816	thrap3a	72	37.807	Poecilia_reticulata
ENSORLG00020016319	thrap3b	93	71.072	ENSPNYG00000003062	thrap3b	93	70.324	Pundamilia_nyererei
ENSORLG00020016319	thrap3b	94	39.358	ENSPNYG00000013314	thrap3a	93	38.824	Pundamilia_nyererei
ENSORLG00020016319	thrap3b	93	48.358	ENSPNAG00000028762	thrap3b	96	48.502	Pygocentrus_nattereri
ENSORLG00020016319	thrap3b	78	45.328	ENSSFOG00015020057	thrap3	94	45.503	Scleropages_formosus
ENSORLG00020016319	thrap3b	78	38.462	ENSSMAG00000003703	thrap3a	78	38.579	Scophthalmus_maximus
ENSORLG00020016319	thrap3b	94	70.478	ENSSMAG00000001259	thrap3b	93	72.229	Scophthalmus_maximus
ENSORLG00020016319	thrap3b	96	39.121	ENSSDUG00000010132	thrap3a	97	39.286	Seriola_dumerili
ENSORLG00020016319	thrap3b	94	73.790	ENSSDUG00000007054	thrap3b	94	75.797	Seriola_dumerili
ENSORLG00020016319	thrap3b	94	74.380	ENSSLDG00000009210	thrap3b	94	76.387	Seriola_lalandi_dorsalis
ENSORLG00020016319	thrap3b	93	39.698	ENSSLDG00000003306	thrap3a	88	46.667	Seriola_lalandi_dorsalis
ENSORLG00020016319	thrap3b	66	76.316	ENSSPAG00000009248	thrap3b	99	78.863	Stegastes_partitus
ENSORLG00020016319	thrap3b	93	39.845	ENSSPAG00000017651	thrap3a	96	39.978	Stegastes_partitus
ENSORLG00020016319	thrap3b	97	36.157	ENSTRUG00000010702	thrap3a	52	53.425	Takifugu_rubripes
ENSORLG00020016319	thrap3b	94	63.593	ENSTRUG00000010336	thrap3b	93	65.796	Takifugu_rubripes
ENSORLG00020016319	thrap3b	94	57.629	ENSTNIG00000004582	thrap3b	93	57.395	Tetraodon_nigroviridis
ENSORLG00020016319	thrap3b	85	69.199	ENSXCOG00000018772	thrap3b	91	70.068	Xiphophorus_couchianus
ENSORLG00020016319	thrap3b	89	38.007	ENSXCOG00000001569	thrap3a	91	36.407	Xiphophorus_couchianus
ENSORLG00020016319	thrap3b	94	73.018	ENSXMAG00000017962	thrap3b	94	72.749	Xiphophorus_maculatus
ENSORLG00020016319	thrap3b	90	36.770	ENSXMAG00000014797	thrap3a	63	38.715	Xiphophorus_maculatus