EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020016476 (Gene tree)
Gene ID: -
Gene Symbol: tsn
Alias: -
Full Name: translin
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 4153 bases
Position: chr21:4689065-4693217
Accession: ZDB-GENE-030131-6039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020031435	Translin	PF01997.16	1.7e-55	1	1
ENSORLP00020031449	Translin	PF01997.16	4e-53	1	1
ENSORLP00020015430	Translin	PF01997.16	3.3e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020023482	-	2194	-	ENSORLP00020031449	229 (aa)	-	-
ENSORLT00020023430	-	639	-	ENSORLP00020015430	212 (aa)	-	-
ENSORLT00020023464	-	1902	-	ENSORLP00020031435	227 (aa)	-	-

Gene Model

Click here to download ENSORLG00020016476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020016476's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020016476	tsn	63	98.611	ENSORLG00020017000	-	84	98.611

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020016476	tsn	99	78.571	ENSG00000211460	TSN	98	78.571	Homo_sapiens
ENSORLG00020016476	tsn	100	93.392	ENSAPOG00000002063	tsn	100	93.392	Acanthochromis_polyacanthus
ENSORLG00020016476	tsn	99	79.018	ENSAMEG00000005055	TSN	98	79.018	Ailuropoda_melanoleuca
ENSORLG00020016476	tsn	100	92.511	ENSACIG00000021694	tsn	100	92.511	Amphilophus_citrinellus
ENSORLG00020016476	tsn	100	93.392	ENSAOCG00000015574	tsn	100	93.659	Amphiprion_ocellaris
ENSORLG00020016476	tsn	100	93.392	ENSAPEG00000001677	tsn	100	93.392	Amphiprion_percula
ENSORLG00020016476	tsn	100	93.833	ENSATEG00000004115	tsn	100	93.833	Anabas_testudineus
ENSORLG00020016476	tsn	94	79.452	ENSACAG00000004757	TSN	99	79.452	Anolis_carolinensis
ENSORLG00020016476	tsn	99	78.571	ENSANAG00000026842	TSN	98	78.571	Aotus_nancymaae
ENSORLG00020016476	tsn	100	92.511	ENSACLG00000020831	tsn	100	92.511	Astatotilapia_calliptera
ENSORLG00020016476	tsn	100	88.106	ENSAMXG00000035417	tsn	100	88.106	Astyanax_mexicanus
ENSORLG00020016476	tsn	99	79.018	ENSBTAG00000006059	TSN	98	79.018	Bos_taurus
ENSORLG00020016476	tsn	99	78.125	ENSCJAG00000044533	-	98	78.125	Callithrix_jacchus
ENSORLG00020016476	tsn	50	66.372	ENSCJAG00000008511	-	88	66.372	Callithrix_jacchus
ENSORLG00020016476	tsn	99	78.571	ENSCJAG00000047222	-	98	78.571	Callithrix_jacchus
ENSORLG00020016476	tsn	99	79.018	ENSCAFG00000004700	TSN	93	79.018	Canis_familiaris
ENSORLG00020016476	tsn	99	79.018	ENSCAFG00020011747	TSN	98	79.018	Canis_lupus_dingo
ENSORLG00020016476	tsn	99	79.018	ENSCHIG00000010715	TSN	98	79.018	Capra_hircus
ENSORLG00020016476	tsn	99	78.571	ENSTSYG00000004395	TSN	98	78.571	Carlito_syrichta
ENSORLG00020016476	tsn	99	63.158	ENSCAPG00000015595	TSN	88	61.991	Cavia_aperea
ENSORLG00020016476	tsn	99	78.571	ENSCPOG00000035645	TSN	98	78.571	Cavia_porcellus
ENSORLG00020016476	tsn	67	65.132	ENSCCAG00000034886	-	84	65.132	Cebus_capucinus
ENSORLG00020016476	tsn	99	78.125	ENSCCAG00000026371	TSN	98	78.125	Cebus_capucinus
ENSORLG00020016476	tsn	99	78.571	ENSCATG00000032155	TSN	98	78.571	Cercocebus_atys
ENSORLG00020016476	tsn	99	78.571	ENSCLAG00000006171	TSN	98	78.571	Chinchilla_lanigera
ENSORLG00020016476	tsn	99	78.571	ENSCSAG00000016712	TSN	98	78.571	Chlorocebus_sabaeus
ENSORLG00020016476	tsn	67	75.497	ENSCPBG00000013741	-	80	75.497	Chrysemys_picta_bellii
ENSORLG00020016476	tsn	99	66.667	ENSCPBG00000018116	-	98	66.667	Chrysemys_picta_bellii
ENSORLG00020016476	tsn	96	48.165	ENSCING00000012612	-	100	48.165	Ciona_intestinalis
ENSORLG00020016476	tsn	98	45.455	ENSCSAVG00000009485	-	99	45.291	Ciona_savignyi
ENSORLG00020016476	tsn	99	78.571	ENSCANG00000041881	TSN	98	78.571	Colobus_angolensis_palliatus
ENSORLG00020016476	tsn	99	78.571	ENSCGRG00001018233	Tsn	98	78.571	Cricetulus_griseus_chok1gshd
ENSORLG00020016476	tsn	99	78.571	ENSCGRG00000008331	Tsn	98	78.571	Cricetulus_griseus_crigri
ENSORLG00020016476	tsn	100	88.106	ENSCSEG00000005825	tsn	100	88.106	Cynoglossus_semilaevis
ENSORLG00020016476	tsn	99	82.589	ENSCVAG00000022024	tsn	99	83.929	Cyprinodon_variegatus
ENSORLG00020016476	tsn	100	88.987	ENSDARG00000041830	tsn	100	88.987	Danio_rerio
ENSORLG00020016476	tsn	99	79.018	ENSDNOG00000025740	TSN	98	79.018	Dasypus_novemcinctus
ENSORLG00020016476	tsn	99	78.571	ENSDORG00000026251	-	98	78.571	Dipodomys_ordii
ENSORLG00020016476	tsn	99	53.521	FBgn0033528	trsn	94	53.333	Drosophila_melanogaster
ENSORLG00020016476	tsn	99	79.018	ENSEASG00005004774	TSN	98	79.018	Equus_asinus_asinus
ENSORLG00020016476	tsn	99	79.018	ENSECAG00000015930	TSN	98	79.018	Equus_caballus
ENSORLG00020016476	tsn	83	77.401	ENSEEUG00000013935	TSN	98	80.588	Erinaceus_europaeus
ENSORLG00020016476	tsn	100	89.868	ENSELUG00000007669	tsn	100	89.868	Esox_lucius
ENSORLG00020016476	tsn	79	59.880	ENSFCAG00000022306	-	89	63.694	Felis_catus
ENSORLG00020016476	tsn	99	79.018	ENSFCAG00000027149	TSN	98	79.018	Felis_catus
ENSORLG00020016476	tsn	97	79.612	ENSFALG00000013247	TSN	93	78.404	Ficedula_albicollis
ENSORLG00020016476	tsn	99	78.571	ENSFDAG00000012302	TSN	98	78.571	Fukomys_damarensis
ENSORLG00020016476	tsn	100	91.189	ENSFHEG00000015531	tsn	100	91.189	Fundulus_heteroclitus
ENSORLG00020016476	tsn	99	84.956	ENSGMOG00000009247	tsn	100	84.956	Gadus_morhua
ENSORLG00020016476	tsn	97	80.090	ENSGALG00000011652	TSN	97	80.090	Gallus_gallus
ENSORLG00020016476	tsn	100	90.308	ENSGAFG00000003816	tsn	100	90.308	Gambusia_affinis
ENSORLG00020016476	tsn	97	91.403	ENSGACG00000000235	tsn	97	91.403	Gasterosteus_aculeatus
ENSORLG00020016476	tsn	99	78.571	ENSGGOG00000002216	TSN	98	79.512	Gorilla_gorilla
ENSORLG00020016476	tsn	100	92.511	ENSHBUG00000002340	tsn	85	92.511	Haplochromis_burtoni
ENSORLG00020016476	tsn	99	78.571	ENSHGLG00000007038	TSN	98	78.571	Heterocephalus_glaber_female
ENSORLG00020016476	tsn	99	78.571	ENSHGLG00100000069	TSN	98	78.571	Heterocephalus_glaber_male
ENSORLG00020016476	tsn	99	89.333	ENSHCOG00000001756	tsn	100	89.333	Hippocampus_comes
ENSORLG00020016476	tsn	100	90.308	ENSIPUG00000021370	tsn	100	90.308	Ictalurus_punctatus
ENSORLG00020016476	tsn	99	78.571	ENSSTOG00000000972	TSN	98	78.571	Ictidomys_tridecemlineatus
ENSORLG00020016476	tsn	99	79.018	ENSJJAG00000006730	Tsn	98	79.018	Jaculus_jaculus
ENSORLG00020016476	tsn	100	92.952	ENSKMAG00000004996	tsn	100	92.952	Kryptolebias_marmoratus
ENSORLG00020016476	tsn	100	92.511	ENSLBEG00000012620	tsn	100	92.511	Labrus_bergylta
ENSORLG00020016476	tsn	100	61.739	ENSLACG00000005246	TSN	100	61.739	Latimeria_chalumnae
ENSORLG00020016476	tsn	99	87.500	ENSLOCG00000002191	tsn	97	87.500	Lepisosteus_oculatus
ENSORLG00020016476	tsn	99	73.128	ENSLAFG00000032428	TSN	98	73.128	Loxodonta_africana
ENSORLG00020016476	tsn	99	78.571	ENSMFAG00000044217	TSN	98	78.571	Macaca_fascicularis
ENSORLG00020016476	tsn	99	78.571	ENSMMUG00000021119	TSN	98	78.571	Macaca_mulatta
ENSORLG00020016476	tsn	99	78.571	ENSMNEG00000040632	TSN	98	78.571	Macaca_nemestrina
ENSORLG00020016476	tsn	55	75.000	ENSMLEG00000038656	TSN	96	75.000	Mandrillus_leucophaeus
ENSORLG00020016476	tsn	100	92.511	ENSMAMG00000019536	tsn	100	92.511	Mastacembelus_armatus
ENSORLG00020016476	tsn	100	92.511	ENSMZEG00005018715	tsn	85	92.511	Maylandia_zebra
ENSORLG00020016476	tsn	83	78.409	ENSMGAG00000011956	TSN	86	81.657	Meleagris_gallopavo
ENSORLG00020016476	tsn	99	77.033	ENSMAUG00000018800	Tsn	98	79.703	Mesocricetus_auratus
ENSORLG00020016476	tsn	99	78.571	ENSMICG00000015793	TSN	98	78.571	Microcebus_murinus
ENSORLG00020016476	tsn	99	78.571	ENSMOCG00000013248	Tsn	98	78.571	Microtus_ochrogaster
ENSORLG00020016476	tsn	100	87.264	ENSMMOG00000019661	tsn	100	90.244	Mola_mola
ENSORLG00020016476	tsn	97	78.733	ENSMODG00000000147	TSN	98	77.333	Monodelphis_domestica
ENSORLG00020016476	tsn	100	92.952	ENSMALG00000001827	tsn	100	92.952	Monopterus_albus
ENSORLG00020016476	tsn	99	78.571	ENSMUSG00000026374	Tsn	98	78.571	Mus_musculus
ENSORLG00020016476	tsn	99	78.571	MGP_PahariEiJ_G0027742	Tsn	98	78.571	Mus_pahari
ENSORLG00020016476	tsn	99	78.571	MGP_SPRETEiJ_G0015313	Tsn	98	78.571	Mus_spretus
ENSORLG00020016476	tsn	99	79.018	ENSMPUG00000001056	TSN	98	79.018	Mustela_putorius_furo
ENSORLG00020016476	tsn	99	77.512	ENSMLUG00000012656	TSN	98	80.198	Myotis_lucifugus
ENSORLG00020016476	tsn	99	78.571	ENSNGAG00000010353	Tsn	98	78.571	Nannospalax_galili
ENSORLG00020016476	tsn	100	92.511	ENSNBRG00000001193	tsn	100	92.511	Neolamprologus_brichardi
ENSORLG00020016476	tsn	99	78.571	ENSNLEG00000032773	TSN	98	78.571	Nomascus_leucogenys
ENSORLG00020016476	tsn	99	58.482	ENSMEUG00000006228	TSN	98	58.482	Notamacropus_eugenii
ENSORLG00020016476	tsn	70	62.838	ENSOPRG00000004858	-	100	65.957	Ochotona_princeps
ENSORLG00020016476	tsn	99	78.571	ENSODEG00000008386	-	98	78.571	Octodon_degus
ENSORLG00020016476	tsn	99	61.607	ENSODEG00000005998	-	98	61.607	Octodon_degus
ENSORLG00020016476	tsn	100	92.952	ENSONIG00000017060	tsn	100	92.952	Oreochromis_niloticus
ENSORLG00020016476	tsn	97	80.000	ENSOANG00000003457	TSN	98	80.788	Ornithorhynchus_anatinus
ENSORLG00020016476	tsn	99	78.571	ENSOCUG00000023529	TSN	98	78.571	Oryctolagus_cuniculus
ENSORLG00020016476	tsn	100	99.119	ENSORLG00000010049	tsn	100	99.119	Oryzias_latipes
ENSORLG00020016476	tsn	100	99.559	ENSORLG00015019192	tsn	100	99.559	Oryzias_latipes_hsok
ENSORLG00020016476	tsn	100	96.916	ENSOMEG00000016335	tsn	100	96.916	Oryzias_melastigma
ENSORLG00020016476	tsn	99	78.571	ENSOGAG00000030436	TSN	98	78.571	Otolemur_garnettii
ENSORLG00020016476	tsn	99	79.018	ENSOARG00000013339	TSN	98	79.018	Ovis_aries
ENSORLG00020016476	tsn	99	78.571	ENSPPAG00000032878	TSN	98	78.571	Pan_paniscus
ENSORLG00020016476	tsn	90	58.421	ENSPPRG00000004174	-	77	60.656	Panthera_pardus
ENSORLG00020016476	tsn	99	79.018	ENSPPRG00000006531	TSN	98	79.018	Panthera_pardus
ENSORLG00020016476	tsn	56	72.656	ENSPTIG00000012953	TSN	88	71.756	Panthera_tigris_altaica
ENSORLG00020016476	tsn	99	78.571	ENSPTRG00000012420	TSN	98	78.571	Pan_troglodytes
ENSORLG00020016476	tsn	99	78.571	ENSPANG00000000733	TSN	98	78.571	Papio_anubis
ENSORLG00020016476	tsn	100	89.868	ENSPKIG00000002005	tsn	100	89.868	Paramormyrops_kingsleyae
ENSORLG00020016476	tsn	84	78.090	ENSPSIG00000006064	TSN	93	81.287	Pelodiscus_sinensis
ENSORLG00020016476	tsn	100	90.749	ENSPMGG00000015287	tsn	100	90.749	Periophthalmus_magnuspinnatus
ENSORLG00020016476	tsn	99	66.825	ENSPMAG00000009161	tsn	97	66.814	Petromyzon_marinus
ENSORLG00020016476	tsn	99	78.469	ENSPCIG00000023491	TSN	98	81.188	Phascolarctos_cinereus
ENSORLG00020016476	tsn	100	91.189	ENSPFOG00000016063	tsn	100	91.189	Poecilia_formosa
ENSORLG00020016476	tsn	100	91.189	ENSPLAG00000010654	tsn	100	91.189	Poecilia_latipinna
ENSORLG00020016476	tsn	100	91.189	ENSPMEG00000023570	tsn	100	91.189	Poecilia_mexicana
ENSORLG00020016476	tsn	100	91.630	ENSPREG00000003481	tsn	100	91.630	Poecilia_reticulata
ENSORLG00020016476	tsn	99	78.571	ENSPPYG00000012774	TSN	98	78.571	Pongo_abelii
ENSORLG00020016476	tsn	83	76.836	ENSPCAG00000003549	TSN	98	80.000	Procavia_capensis
ENSORLG00020016476	tsn	99	78.571	ENSPCOG00000011045	TSN	98	78.571	Propithecus_coquereli
ENSORLG00020016476	tsn	99	79.018	ENSPVAG00000016702	TSN	98	79.018	Pteropus_vampyrus
ENSORLG00020016476	tsn	100	92.511	ENSPNYG00000012396	tsn	85	92.511	Pundamilia_nyererei
ENSORLG00020016476	tsn	100	90.308	ENSPNAG00000018140	tsn	100	90.308	Pygocentrus_nattereri
ENSORLG00020016476	tsn	99	78.571	ENSRNOG00000002319	Tsn	98	78.571	Rattus_norvegicus
ENSORLG00020016476	tsn	99	78.571	ENSRBIG00000041316	TSN	98	78.571	Rhinopithecus_bieti
ENSORLG00020016476	tsn	99	78.571	ENSRROG00000029954	TSN	98	78.571	Rhinopithecus_roxellana
ENSORLG00020016476	tsn	84	62.105	ENSSBOG00000015719	-	94	62.105	Saimiri_boliviensis_boliviensis
ENSORLG00020016476	tsn	99	78.571	ENSSBOG00000028579	TSN	98	78.571	Saimiri_boliviensis_boliviensis
ENSORLG00020016476	tsn	99	79.464	ENSSHAG00000011707	TSN	98	79.464	Sarcophilus_harrisii
ENSORLG00020016476	tsn	100	90.308	ENSSFOG00015020668	tsn	100	90.308	Scleropages_formosus
ENSORLG00020016476	tsn	100	90.308	ENSSMAG00000005822	tsn	100	90.308	Scophthalmus_maximus
ENSORLG00020016476	tsn	100	94.273	ENSSDUG00000011388	tsn	100	94.273	Seriola_dumerili
ENSORLG00020016476	tsn	100	94.273	ENSSLDG00000008206	tsn	100	94.273	Seriola_lalandi_dorsalis
ENSORLG00020016476	tsn	97	52.489	ENSSARG00000007193	-	97	52.489	Sorex_araneus
ENSORLG00020016476	tsn	97	81.818	ENSSPUG00000017518	TSN	96	81.818	Sphenodon_punctatus
ENSORLG00020016476	tsn	100	93.392	ENSSPAG00000009283	tsn	100	93.392	Stegastes_partitus
ENSORLG00020016476	tsn	97	80.090	ENSSSCG00000015729	TSN	97	81.407	Sus_scrofa
ENSORLG00020016476	tsn	97	80.543	ENSTGUG00000004445	TSN	97	80.543	Taeniopygia_guttata
ENSORLG00020016476	tsn	98	90.135	ENSTRUG00000013691	tsn	99	90.135	Takifugu_rubripes
ENSORLG00020016476	tsn	100	89.868	ENSTNIG00000015707	tsn	100	89.868	Tetraodon_nigroviridis
ENSORLG00020016476	tsn	99	78.571	ENSTBEG00000015319	TSN	98	78.571	Tupaia_belangeri
ENSORLG00020016476	tsn	99	79.018	ENSTTRG00000005854	TSN	98	79.018	Tursiops_truncatus
ENSORLG00020016476	tsn	99	79.018	ENSUAMG00000021618	TSN	98	79.018	Ursus_americanus
ENSORLG00020016476	tsn	99	77.679	ENSUMAG00000008516	TSN	98	77.679	Ursus_maritimus
ENSORLG00020016476	tsn	61	61.240	ENSVPAG00000009874	-	100	61.240	Vicugna_pacos
ENSORLG00020016476	tsn	99	77.512	ENSVVUG00000027555	TSN	98	79.412	Vulpes_vulpes
ENSORLG00020016476	tsn	97	75.455	ENSXETG00000000838	tsn	96	75.455	Xenopus_tropicalis
ENSORLG00020016476	tsn	55	87.097	ENSXCOG00000018514	tsn	95	87.097	Xiphophorus_couchianus
ENSORLG00020016476	tsn	100	90.749	ENSXMAG00000022538	tsn	100	90.749	Xiphophorus_maculatus