EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020016480 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 4900 bases
Position: chr12:13225599-13230498
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020015470	RVT_1	PF00078.27	1.9e-11	1	1
ENSORLP00020031448	RVT_1	PF00078.27	1.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020023495	-	3584	-	ENSORLP00020015470	789 (aa)	-	-
ENSORLT00020033471	-	3263	-	ENSORLP00020031448	789 (aa)	-	-

Gene Model

Click here to download ENSORLG00020016480's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020016480's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020016480	-	97	33.548	ENSORLG00020004022	-	72	33.548
ENSORLG00020016480	-	54	40.515	ENSORLG00020020421	-	56	40.515
ENSORLG00020016480	-	87	37.660	ENSORLG00020000502	-	57	36.086
ENSORLG00020016480	-	57	40.889	ENSORLG00020001172	-	74	40.889
ENSORLG00020016480	-	89	35.105	ENSORLG00020004971	-	80	35.335
ENSORLG00020016480	-	97	98.309	ENSORLG00020014275	-	75	98.309
ENSORLG00020016480	-	67	36.842	ENSORLG00020019030	-	64	36.842
ENSORLG00020016480	-	60	34.647	ENSORLG00020002002	-	74	34.647
ENSORLG00020016480	-	91	32.809	ENSORLG00020021465	-	57	32.809
ENSORLG00020016480	-	99	35.500	ENSORLG00020008265	-	59	35.169
ENSORLG00020016480	-	89	35.615	ENSORLG00020010381	-	58	35.615
ENSORLG00020016480	-	79	31.201	ENSORLG00020012971	-	51	31.083
ENSORLG00020016480	-	98	98.581	ENSORLG00020004233	-	61	98.581
ENSORLG00020016480	-	57	31.148	ENSORLG00020001657	-	54	31.148
ENSORLG00020016480	-	71	30.897	ENSORLG00020013042	-	51	30.897
ENSORLG00020016480	-	84	30.949	ENSORLG00020009084	-	91	30.949
ENSORLG00020016480	-	89	36.084	ENSORLG00020005861	-	59	35.169

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020016480	-	59	32.128	ENSAPOG00000006495	-	93	32.340	Acanthochromis_polyacanthus
ENSORLG00020016480	-	78	36.084	ENSAPOG00000012090	-	76	36.084	Acanthochromis_polyacanthus
ENSORLG00020016480	-	98	37.245	ENSACLG00000018225	-	59	39.100	Astatotilapia_calliptera
ENSORLG00020016480	-	97	35.944	ENSACLG00000017062	-	73	35.687	Astatotilapia_calliptera
ENSORLG00020016480	-	69	38.517	ENSACLG00000005337	-	53	38.517	Astatotilapia_calliptera
ENSORLG00020016480	-	98	37.292	ENSACLG00000015817	-	57	37.803	Astatotilapia_calliptera
ENSORLG00020016480	-	97	37.242	ENSACLG00000016676	-	58	37.242	Astatotilapia_calliptera
ENSORLG00020016480	-	67	39.015	ENSACLG00000018563	-	95	39.015	Astatotilapia_calliptera
ENSORLG00020016480	-	98	37.755	ENSACLG00000022170	-	74	39.381	Astatotilapia_calliptera
ENSORLG00020016480	-	90	35.989	ENSACLG00000027702	-	84	35.989	Astatotilapia_calliptera
ENSORLG00020016480	-	98	35.959	ENSACLG00000017755	-	58	35.705	Astatotilapia_calliptera
ENSORLG00020016480	-	97	37.242	ENSACLG00000008642	-	71	37.242	Astatotilapia_calliptera
ENSORLG00020016480	-	89	37.115	ENSAMXG00000040613	-	51	37.115	Astyanax_mexicanus
ENSORLG00020016480	-	89	35.502	ENSAMXG00000041082	-	54	35.502	Astyanax_mexicanus
ENSORLG00020016480	-	69	39.083	ENSCVAG00000020225	-	53	39.083	Cyprinodon_variegatus
ENSORLG00020016480	-	51	39.152	ENSHBUG00000016250	-	72	39.152	Haplochromis_burtoni
ENSORLG00020016480	-	60	35.833	ENSHCOG00000007453	-	51	35.833	Hippocampus_comes
ENSORLG00020016480	-	98	38.599	ENSORLG00000022041	-	58	38.697	Oryzias_latipes
ENSORLG00020016480	-	98	98.452	ENSORLG00000027118	-	56	98.452	Oryzias_latipes
ENSORLG00020016480	-	98	97.935	ENSORLG00000029490	-	56	97.935	Oryzias_latipes
ENSORLG00020016480	-	92	38.618	ENSORLG00000023484	-	55	38.618	Oryzias_latipes
ENSORLG00020016480	-	97	35.939	ENSORLG00000025291	-	74	37.447	Oryzias_latipes
ENSORLG00020016480	-	89	35.754	ENSORLG00000027297	-	51	35.754	Oryzias_latipes
ENSORLG00020016480	-	91	97.908	ENSORLG00000028630	-	58	97.908	Oryzias_latipes
ENSORLG00020016480	-	73	36.442	ENSORLG00000025169	-	61	36.442	Oryzias_latipes
ENSORLG00020016480	-	89	35.335	ENSORLG00000023329	-	51	35.335	Oryzias_latipes
ENSORLG00020016480	-	50	37.905	ENSORLG00000028640	-	75	37.905	Oryzias_latipes
ENSORLG00020016480	-	100	98.099	ENSORLG00015017638	-	100	98.099	Oryzias_latipes_hsok
ENSORLG00020016480	-	98	35.924	ENSORLG00015008822	-	88	35.888	Oryzias_latipes_hsok
ENSORLG00020016480	-	97	35.732	ENSORLG00015009567	-	52	37.307	Oryzias_latipes_hsok
ENSORLG00020016480	-	89	98.580	ENSORLG00015004212	-	100	98.580	Oryzias_latipes_hsok
ENSORLG00020016480	-	55	35.845	ENSORLG00015010653	-	61	35.845	Oryzias_latipes_hsok
ENSORLG00020016480	-	89	36.107	ENSORLG00015011725	-	52	36.107	Oryzias_latipes_hsok
ENSORLG00020016480	-	89	36.056	ENSOMEG00000015349	-	52	36.056	Oryzias_melastigma