EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSORLG00020016506 (Gene tree)
Gene ID
-
Gene Symbol
patl2
Alias
-
Full Name
protein PAT1 homolog 2
Gene Type
protein_coding
Species
Oryzias_latipes_hni
Status
putative
Strand
Plus strand
Length
8558 bases
Position
chr19:6432944-6441501
Accession
101174467
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00020031476PAT1PF09770.96.1e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00020023533-2813XM_011488027ENSORLP00020031476729 (aa)XP_011486329-
Gene Model
Click here to download ENSORLG00020016506's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020016506's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00020016506patl26133.004ENSG00000166889PATL16433.663Homo_sapiens
ENSORLG00020016506patl26143.074ENSG00000229474PATL29946.260Homo_sapiens
ENSORLG00020016506patl25236.111ENSAPOG00000021290patl15735.831Acanthochromis_polyacanthus
ENSORLG00020016506patl29275.184ENSAPOG00000022988patl210073.730Acanthochromis_polyacanthus
ENSORLG00020016506patl26133.202ENSAMEG00000014215PATL16433.597Ailuropoda_melanoleuca
ENSORLG00020016506patl25246.231ENSAMEG00000014997PATL29241.851Ailuropoda_melanoleuca
ENSORLG00020016506patl25436.829ENSACIG00000005182patl15536.534Amphilophus_citrinellus
ENSORLG00020016506patl25236.111ENSAOCG00000021993patl15336.066Amphiprion_ocellaris
ENSORLG00020016506patl29973.684ENSAOCG00000023738patl29974.089Amphiprion_ocellaris
ENSORLG00020016506patl28382.803ENSAPEG00000011299patl29783.190Amphiprion_percula
ENSORLG00020016506patl25336.000ENSAPEG00000021391patl15236.047Amphiprion_percula
ENSORLG00020016506patl29168.235ENSATEG00000019567patl29969.072Anabas_testudineus
ENSORLG00020016506patl27744.281ENSAPLG00000003980PATL29743.883Anas_platyrhynchos
ENSORLG00020016506patl26133.466ENSACAG00000006607PATL16433.466Anolis_carolinensis
ENSORLG00020016506patl26640.909ENSANAG00000022701PATL28142.670Aotus_nancymaae
ENSORLG00020016506patl26133.004ENSANAG00000023078PATL16433.861Aotus_nancymaae
ENSORLG00020016506patl29771.313ENSACLG00000010326patl210073.003Astatotilapia_calliptera
ENSORLG00020016506patl29753.772ENSAMXG00000020293patl210051.172Astyanax_mexicanus
ENSORLG00020016506patl25235.840ENSAMXG00000010731patl15635.981Astyanax_mexicanus
ENSORLG00020016506patl26133.728ENSBTAG00000005913PATL16433.992Bos_taurus
ENSORLG00020016506patl26132.871ENSCJAG00000016192PATL16433.465Callithrix_jacchus
ENSORLG00020016506patl26341.909ENSCJAG00000002379PATL28441.895Callithrix_jacchus
ENSORLG00020016506patl26133.202ENSCAFG00000007581PATL16433.267Canis_familiaris
ENSORLG00020016506patl25346.000ENSCAFG00000013629PATL27246.000Canis_familiaris
ENSORLG00020016506patl29130.064ENSCAFG00020001648PATL18731.407Canis_lupus_dingo
ENSORLG00020016506patl25346.000ENSCAFG00020022169PATL27246.000Canis_lupus_dingo
ENSORLG00020016506patl26042.117ENSCHIG00000026665PATL28542.241Capra_hircus
ENSORLG00020016506patl26132.745ENSCHIG00000025913PATL16533.794Capra_hircus
ENSORLG00020016506patl25046.649ENSTSYG00000032456PATL28243.506Carlito_syrichta
ENSORLG00020016506patl26132.665ENSTSYG00000012748PATL18231.045Carlito_syrichta
ENSORLG00020016506patl26133.202ENSCAPG00000013668PATL16433.794Cavia_aperea
ENSORLG00020016506patl25635.747ENSCPOG00000006827PATL15935.232Cavia_porcellus
ENSORLG00020016506patl26133.069ENSCCAG00000023759PATL16433.861Cebus_capucinus
ENSORLG00020016506patl26132.738ENSCATG00000009629PATL16433.861Cercocebus_atys
ENSORLG00020016506patl26132.871ENSCLAG00000003427PATL16433.267Chinchilla_lanigera
ENSORLG00020016506patl25242.611ENSCLAG00000014407PATL28041.951Chinchilla_lanigera
ENSORLG00020016506patl26132.738ENSCSAG00000006095PATL17133.861Chlorocebus_sabaeus
ENSORLG00020016506patl25335.084ENSCHOG00000001611PATL16635.198Choloepus_hoffmanni
ENSORLG00020016506patl26349.275ENSCPBG00000006150PATL26949.788Chrysemys_picta_bellii
ENSORLG00020016506patl26142.609ENSCANG00000013856PATL28342.609Colobus_angolensis_palliatus
ENSORLG00020016506patl26132.871ENSCANG00000039197PATL16433.465Colobus_angolensis_palliatus
ENSORLG00020016506patl26133.465ENSCGRG00001024927Patl16433.730Cricetulus_griseus_chok1gshd
ENSORLG00020016506patl25643.794ENSCGRG00001010801Patl28143.437Cricetulus_griseus_chok1gshd
ENSORLG00020016506patl26133.465ENSCGRG00000000461Patl16433.730Cricetulus_griseus_crigri
ENSORLG00020016506patl25643.794ENSCGRG00000013007Patl28143.437Cricetulus_griseus_crigri
ENSORLG00020016506patl25336.386ENSCSEG00000008261patl15836.300Cynoglossus_semilaevis
ENSORLG00020016506patl27973.368ENSCSEG00000009438patl28573.183Cynoglossus_semilaevis
ENSORLG00020016506patl25235.678ENSCVAG00000006664patl15535.646Cyprinodon_variegatus
ENSORLG00020016506patl29458.551ENSCVAG00000016203patl29270.901Cyprinodon_variegatus
ENSORLG00020016506patl25635.446ENSDARG00000017423patl15435.446Danio_rerio
ENSORLG00020016506patl29554.709ENSDARG00000089567patl28160.068Danio_rerio
ENSORLG00020016506patl26442.710ENSDNOG00000036837PATL27144.988Dasypus_novemcinctus
ENSORLG00020016506patl26531.471ENSDNOG00000038865PATL18932.609Dasypus_novemcinctus
ENSORLG00020016506patl25643.224ENSDORG00000026649Patl28042.619Dipodomys_ordii
ENSORLG00020016506patl26132.871ENSDORG00000000237Patl16433.135Dipodomys_ordii
ENSORLG00020016506patl29130.167ENSEASG00005007963PATL18731.928Equus_asinus_asinus
ENSORLG00020016506patl26133.932ENSECAG00000011411PATL16433.992Equus_caballus
ENSORLG00020016506patl25236.272ENSELUG00000024249patl15436.300Esox_lucius
ENSORLG00020016506patl29461.844ENSELUG00000023244patl28166.379Esox_lucius
ENSORLG00020016506patl26642.376ENSFCAG00000027170PATL27746.118Felis_catus
ENSORLG00020016506patl26133.267ENSFCAG00000015573PATL16433.267Felis_catus
ENSORLG00020016506patl25435.915ENSFALG00000012150PATL16433.665Ficedula_albicollis
ENSORLG00020016506patl27742.379ENSFALG00000009768PATL28341.941Ficedula_albicollis
ENSORLG00020016506patl26133.932ENSFDAG00000016128PATL16433.667Fukomys_damarensis
ENSORLG00020016506patl25740.654ENSFDAG00000012242PATL27839.904Fukomys_damarensis
ENSORLG00020016506patl25436.341ENSFHEG00000017790patl15136.516Fundulus_heteroclitus
ENSORLG00020016506patl25783.489ENSFHEG00000009727patl29983.489Fundulus_heteroclitus
ENSORLG00020016506patl25868.298ENSGMOG00000005666patl29968.471Gadus_morhua
ENSORLG00020016506patl25236.145ENSGALG00000042641PATL16433.468Gallus_gallus
ENSORLG00020016506patl27741.629ENSGALG00000002167PATL25849.163Gallus_gallus
ENSORLG00020016506patl29774.441ENSGAFG00000019344patl210074.167Gambusia_affinis
ENSORLG00020016506patl25236.842ENSGAFG00000006508patl15136.300Gambusia_affinis
ENSORLG00020016506patl25435.422ENSGACG00000016448patl15436.038Gasterosteus_aculeatus
ENSORLG00020016506patl29130.618ENSGAGG00000004461PATL17133.004Gopherus_agassizii
ENSORLG00020016506patl26143.290ENSGGOG00000025923PATL28343.290Gorilla_gorilla
ENSORLG00020016506patl26133.000ENSGGOG00000004335PATL16533.667Gorilla_gorilla
ENSORLG00020016506patl29375.573ENSHBUG00000005929patl29875.382Haplochromis_burtoni
ENSORLG00020016506patl26533.209ENSHGLG00000018173PATL16434.455Heterocephalus_glaber_female
ENSORLG00020016506patl26533.209ENSHGLG00100003453PATL16534.455Heterocephalus_glaber_male
ENSORLG00020016506patl29570.513ENSHCOG00000016754patl29869.801Hippocampus_comes
ENSORLG00020016506patl29753.417ENSIPUG00000020692patl210052.454Ictalurus_punctatus
ENSORLG00020016506patl25944.866ENSSTOG00000033848PATL27944.866Ictidomys_tridecemlineatus
ENSORLG00020016506patl26532.463ENSSTOG00000013764PATL16533.333Ictidomys_tridecemlineatus
ENSORLG00020016506patl26432.397ENSJJAG00000010135Patl16532.874Jaculus_jaculus
ENSORLG00020016506patl29777.577ENSKMAG00000021275patl210077.577Kryptolebias_marmoratus
ENSORLG00020016506patl27880.446ENSLBEG00000022344patl28080.308Labrus_bergylta
ENSORLG00020016506patl26231.111ENSLACG00000004640PATL16631.174Latimeria_chalumnae
ENSORLG00020016506patl29041.240ENSLACG00000005291-5950.330Latimeria_chalumnae
ENSORLG00020016506patl25235.627ENSLOCG00000000717patl15635.253Lepisosteus_oculatus
ENSORLG00020016506patl26532.156ENSLAFG00000015161PATL16433.004Loxodonta_africana
ENSORLG00020016506patl25344.175ENSLAFG00000031124PATL27643.704Loxodonta_africana
ENSORLG00020016506patl26142.981ENSMFAG00000003565PATL28342.981Macaca_fascicularis
ENSORLG00020016506patl26132.738ENSMFAG00000040851PATL16433.861Macaca_fascicularis
ENSORLG00020016506patl26132.738ENSMMUG00000017287PATL16433.861Macaca_mulatta
ENSORLG00020016506patl26132.738ENSMNEG00000038692PATL16433.861Macaca_nemestrina
ENSORLG00020016506patl26132.738ENSMLEG00000030044PATL16433.861Mandrillus_leucophaeus
ENSORLG00020016506patl25336.658ENSMAMG00000003950patl15436.321Mastacembelus_armatus
ENSORLG00020016506patl29368.029ENSMAMG00000013327patl29967.057Mastacembelus_armatus
ENSORLG00020016506patl29771.313ENSMZEG00005014292patl210073.003Maylandia_zebra
ENSORLG00020016506patl27744.262ENSMGAG00000001309PATL29744.040Meleagris_gallopavo
ENSORLG00020016506patl26043.013ENSMAUG00000001008Patl28443.764Mesocricetus_auratus
ENSORLG00020016506patl26130.417ENSMICG00000004172PATL16231.076Microcebus_murinus
ENSORLG00020016506patl26133.728ENSMOCG00000010087Patl16433.992Microtus_ochrogaster
ENSORLG00020016506patl25544.787ENSMOCG00000015367Patl27844.787Microtus_ochrogaster
ENSORLG00020016506patl25536.538ENSMMOG00000013711patl15836.538Mola_mola
ENSORLG00020016506patl28373.661ENSMMOG00000001299patl29773.661Mola_mola
ENSORLG00020016506patl26341.494ENSMODG00000017690PATL28341.632Monodelphis_domestica
ENSORLG00020016506patl26632.037ENSMODG00000020201PATL16433.532Monodelphis_domestica
ENSORLG00020016506patl29769.083ENSMALG00000008131patl29669.306Monopterus_albus
ENSORLG00020016506patl26532.463MGP_CAROLIEiJ_G0022739Patl16433.333Mus_caroli
ENSORLG00020016506patl25841.575MGP_CAROLIEiJ_G0024205Patl28141.758Mus_caroli
ENSORLG00020016506patl26532.463ENSMUSG00000046139Patl16433.333Mus_musculus
ENSORLG00020016506patl25741.798ENSMUSG00000027233Patl28640.289Mus_musculus
ENSORLG00020016506patl25841.333MGP_PahariEiJ_G0025648Patl28141.556Mus_pahari
ENSORLG00020016506patl26133.531MGP_PahariEiJ_G0014233Patl16433.794Mus_pahari
ENSORLG00020016506patl26532.463MGP_SPRETEiJ_G0023652Patl16433.333Mus_spretus
ENSORLG00020016506patl25841.667MGP_SPRETEiJ_G0025122Patl28141.850Mus_spretus
ENSORLG00020016506patl26133.202ENSMPUG00000014607PATL16433.267Mustela_putorius_furo
ENSORLG00020016506patl25834.096ENSMLUG00000011169PATL18730.803Myotis_lucifugus
ENSORLG00020016506patl25340.488ENSNGAG00000020368Patl27740.806Nannospalax_galili
ENSORLG00020016506patl26532.276ENSNGAG00000003682Patl16433.333Nannospalax_galili
ENSORLG00020016506patl29567.710ENSNBRG00000011745patl29868.254Neolamprologus_brichardi
ENSORLG00020016506patl26132.800ENSNLEG00000013081PATL16533.600Nomascus_leucogenys
ENSORLG00020016506patl26641.449ENSNLEG00000005673PATL28442.424Nomascus_leucogenys
ENSORLG00020016506patl25236.432ENSONIG00000004170patl15634.977Oreochromis_niloticus
ENSORLG00020016506patl29771.757ENSONIG00000011519patl210072.902Oreochromis_niloticus
ENSORLG00020016506patl25939.655ENSOANG00000001538-9740.435Ornithorhynchus_anatinus
ENSORLG00020016506patl26533.028ENSOCUG00000002156PATL16433.918Oryctolagus_cuniculus
ENSORLG00020016506patl29798.868ENSORLG00000005780patl210098.868Oryzias_latipes
ENSORLG00020016506patl29798.868ENSORLG00015014500patl210098.868Oryzias_latipes_hsok
ENSORLG00020016506patl25236.616ENSORLG00015022240patl15136.946Oryzias_latipes_hsok
ENSORLG00020016506patl29789.986ENSOMEG00000021628patl210089.986Oryzias_melastigma
ENSORLG00020016506patl26133.267ENSOGAG00000004351PATL16433.929Otolemur_garnettii
ENSORLG00020016506patl26641.153ENSOGAG00000004709PATL28941.153Otolemur_garnettii
ENSORLG00020016506patl25542.558ENSOARG00000003762PATL27742.217Ovis_aries
ENSORLG00020016506patl26133.531ENSOARG00000012005PATL16233.597Ovis_aries
ENSORLG00020016506patl26132.871ENSPPAG00000034275PATL16633.532Pan_paniscus
ENSORLG00020016506patl26143.074ENSPPAG00000007221PATL28243.074Pan_paniscus
ENSORLG00020016506patl26133.465ENSPPRG00000020639PATL16433.400Panthera_pardus
ENSORLG00020016506patl26642.178ENSPPRG00000004279PATL27645.882Panthera_pardus
ENSORLG00020016506patl26133.465ENSPTIG00000019298PATL16433.400Panthera_tigris_altaica
ENSORLG00020016506patl26642.178ENSPTIG00000018964PATL27745.882Panthera_tigris_altaica
ENSORLG00020016506patl26131.352ENSPTRG00000003697PATL16330.629Pan_troglodytes
ENSORLG00020016506patl26143.074ENSPTRG00000041536PATL28243.074Pan_troglodytes
ENSORLG00020016506patl26132.738ENSPANG00000035620PATL16433.861Papio_anubis
ENSORLG00020016506patl25534.679ENSPKIG00000016224patl15634.742Paramormyrops_kingsleyae
ENSORLG00020016506patl29752.510ENSPKIG00000016887patl28356.975Paramormyrops_kingsleyae
ENSORLG00020016506patl26133.399ENSPSIG00000016206PATL16233.399Pelodiscus_sinensis
ENSORLG00020016506patl25347.317ENSPSIG00000017690PATL29345.812Pelodiscus_sinensis
ENSORLG00020016506patl29365.116ENSPMGG00000014550patl28569.808Periophthalmus_magnuspinnatus
ENSORLG00020016506patl25237.688ENSPMGG00000002644patl15337.560Periophthalmus_magnuspinnatus
ENSORLG00020016506patl26133.465ENSPEMG00000014215Patl16433.730Peromyscus_maniculatus_bairdii
ENSORLG00020016506patl26340.956ENSPEMG00000016509Patl28141.855Peromyscus_maniculatus_bairdii
ENSORLG00020016506patl26632.117ENSPCIG00000010852PATL16532.874Phascolarctos_cinereus
ENSORLG00020016506patl25942.152ENSPCIG00000018256PATL28942.152Phascolarctos_cinereus
ENSORLG00020016506patl25436.098ENSPFOG00000007768patl15335.664Poecilia_formosa
ENSORLG00020016506patl29774.441ENSPFOG00000007305patl210073.677Poecilia_formosa
ENSORLG00020016506patl29774.581ENSPLAG00000020713patl210074.028Poecilia_latipinna
ENSORLG00020016506patl25236.341ENSPLAG00000018465patl15135.897Poecilia_latipinna
ENSORLG00020016506patl29773.955ENSPMEG00000018942patl210073.750Poecilia_mexicana
ENSORLG00020016506patl25436.341ENSPMEG00000006555patl15135.897Poecilia_mexicana
ENSORLG00020016506patl28266.829ENSPREG00000023066patl29966.181Poecilia_reticulata
ENSORLG00020016506patl26133.399ENSPPYG00000003230PATL16434.190Pongo_abelii
ENSORLG00020016506patl25345.000ENSPCOG00000000295PATL29945.429Propithecus_coquereli
ENSORLG00020016506patl26132.673ENSPCOG00000020770PATL18731.213Propithecus_coquereli
ENSORLG00020016506patl26131.827ENSPVAG00000015239PATL17532.549Pteropus_vampyrus
ENSORLG00020016506patl29565.607ENSPNYG00000017381patl29875.573Pundamilia_nyererei
ENSORLG00020016506patl25335.961ENSPNAG00000017907patl15735.088Pygocentrus_nattereri
ENSORLG00020016506patl29754.571ENSPNAG00000002315patl29155.556Pygocentrus_nattereri
ENSORLG00020016506patl25343.478ENSRNOG00000017061Patl27543.951Rattus_norvegicus
ENSORLG00020016506patl26133.465ENSRNOG00000021052Patl16433.730Rattus_norvegicus
ENSORLG00020016506patl26532.276ENSRROG00000032861PATL16433.663Rhinopithecus_roxellana
ENSORLG00020016506patl26132.673ENSSBOG00000025195PATL16633.465Saimiri_boliviensis_boliviensis
ENSORLG00020016506patl25335.238ENSSHAG00000004309PATL16433.465Sarcophilus_harrisii
ENSORLG00020016506patl25236.842ENSSFOG00015009614patl15435.915Scleropages_formosus
ENSORLG00020016506patl29053.835ENSSFOG00015000720patl28455.966Scleropages_formosus
ENSORLG00020016506patl28382.339ENSSMAG00000017262patl28082.339Scophthalmus_maximus
ENSORLG00020016506patl29777.083ENSSDUG00000022927patl210076.944Seriola_dumerili
ENSORLG00020016506patl25435.539ENSSLDG00000019146patl15035.597Seriola_lalandi_dorsalis
ENSORLG00020016506patl29373.661ENSSLDG00000017922patl210073.517Seriola_lalandi_dorsalis
ENSORLG00020016506patl25044.819ENSSARG00000009047PATL27344.715Sorex_araneus
ENSORLG00020016506patl26532.276ENSSARG00000009600PATL16433.597Sorex_araneus
ENSORLG00020016506patl25335.238ENSSPUG00000009453PATL15535.476Sphenodon_punctatus
ENSORLG00020016506patl29371.948ENSSPAG00000004784patl210072.093Stegastes_partitus
ENSORLG00020016506patl25236.020ENSSPAG00000003187patl15435.831Stegastes_partitus
ENSORLG00020016506patl27831.424ENSSSCG00000013124PATL19630.917Sus_scrofa
ENSORLG00020016506patl25046.429ENSTGUG00000004619-9545.953Taeniopygia_guttata
ENSORLG00020016506patl25436.000ENSTGUG00000006222PATL16433.733Taeniopygia_guttata
ENSORLG00020016506patl29771.130ENSTRUG00000005647patl29872.000Takifugu_rubripes
ENSORLG00020016506patl25235.264ENSTRUG00000000709patl15135.516Takifugu_rubripes
ENSORLG00020016506patl25431.633ENSTBEG00000000796PATL15433.939Tupaia_belangeri
ENSORLG00020016506patl25235.338ENSTTRG00000009389PATL16034.422Tursiops_truncatus
ENSORLG00020016506patl26641.980ENSUAMG00000018533PATL28842.285Ursus_americanus
ENSORLG00020016506patl26641.865ENSUMAG00000007738PATL28842.116Ursus_maritimus
ENSORLG00020016506patl29030.091ENSUMAG00000018634PATL18931.259Ursus_maritimus
ENSORLG00020016506patl25346.250ENSVVUG00000011576PATL27346.250Vulpes_vulpes
ENSORLG00020016506patl26133.202ENSVVUG00000016668PATL18731.407Vulpes_vulpes
ENSORLG00020016506patl27643.322ENSXETG00000014167patl210043.069Xenopus_tropicalis
ENSORLG00020016506patl25337.500ENSXCOG00000010808patl17336.916Xiphophorus_couchianus
ENSORLG00020016506patl29574.893ENSXMAG00000018464patl210073.501Xiphophorus_maculatus
ENSORLG00020016506patl25237.093ENSXMAG00000013834patl15136.534Xiphophorus_maculatus

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