EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020016592 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 55528 bases
Position: chr14:19638577-19694104
Accession: 101172013
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020031521	cwf21	PF08312.12	3.3e-16	1	1
ENSORLP00020031521	SRRM_C	PF15230.6	3.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020024056	-	3371	XM_011483759	ENSORLP00020031521	627 (aa)	XP_011482061	-

Gene Model

Click here to download ENSORLG00020016592's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020016592's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020016592	-	89	80.035	ENSAPOG00000000288	SRRM3	88	80.175	Acanthochromis_polyacanthus
ENSORLG00020016592	-	89	75.265	ENSACLG00000005269	SRRM3	88	75.439	Astatotilapia_calliptera
ENSORLG00020016592	-	89	51.300	ENSAMXG00000016051	-	100	52.424	Astyanax_mexicanus
ENSORLG00020016592	-	53	50.276	ENSCPBG00000027784	SRRM3	53	44.505	Chrysemys_picta_bellii
ENSORLG00020016592	-	89	69.930	ENSCSEG00000010978	-	80	69.965	Cynoglossus_semilaevis
ENSORLG00020016592	-	89	77.289	ENSGAFG00000014777	SRRM3	100	75.039	Gambusia_affinis
ENSORLG00020016592	-	89	75.838	ENSHBUG00000005061	SRRM3	100	73.148	Haplochromis_burtoni
ENSORLG00020016592	-	89	52.069	ENSIPUG00000012467	srrm3	87	52.316	Ictalurus_punctatus
ENSORLG00020016592	-	55	47.660	ENSSTOG00000014181	SRRM3	78	55.738	Ictidomys_tridecemlineatus
ENSORLG00020016592	-	90	76.132	ENSKMAG00000013495	SRRM3	100	72.699	Kryptolebias_marmoratus
ENSORLG00020016592	-	53	57.184	ENSLOCG00000002879	SRRM3	98	56.322	Lepisosteus_oculatus
ENSORLG00020016592	-	91	74.355	ENSMALG00000000844	-	90	74.081	Monopterus_albus
ENSORLG00020016592	-	54	64.426	ENSONIG00000012732	-	78	75.833	Oreochromis_niloticus
ENSORLG00020016592	-	100	98.724	ENSORLG00000026242	-	100	98.724	Oryzias_latipes
ENSORLG00020016592	-	100	98.565	ENSORLG00015022712	SRRM3	100	98.565	Oryzias_latipes_hsok
ENSORLG00020016592	-	100	90.665	ENSOMEG00000010768	-	100	92.247	Oryzias_melastigma
ENSORLG00020016592	-	89	50.424	ENSPKIG00000017233	SRRM3	92	50.671	Paramormyrops_kingsleyae
ENSORLG00020016592	-	89	57.525	ENSPFOG00000009007	SRRM3	65	59.765	Poecilia_formosa
ENSORLG00020016592	-	89	75.795	ENSPMEG00000011981	-	100	73.107	Poecilia_mexicana
ENSORLG00020016592	-	89	77.915	ENSPREG00000008138	-	88	78.070	Poecilia_reticulata
ENSORLG00020016592	-	89	53.741	ENSPNAG00000009621	SRRM3	87	54.992	Pygocentrus_nattereri
ENSORLG00020016592	-	60	52.381	ENSSFOG00015001696	SRRM3	89	56.168	Scleropages_formosus
ENSORLG00020016592	-	89	76.585	ENSSMAG00000000476	SRRM3	100	75.701	Scophthalmus_maximus
ENSORLG00020016592	-	89	76.857	ENSSLDG00000020070	SRRM3	88	76.501	Seriola_lalandi_dorsalis
ENSORLG00020016592	-	89	76.408	ENSXMAG00000005663	-	88	76.573	Xiphophorus_maculatus