EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSORLG00020016676 (Gene tree)
Gene ID
-
Gene Symbol
clp1
Alias
-
Full Name
cleavage and polyadenylation factor I subunit 1
Gene Type
protein_coding
Species
Oryzias_latipes_hni
Status
putative
Strand
Minus strand
Length
2914 bases
Position
chr10:12759929-12762842
Accession
ZDB-GENE-030131-5306
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00020015649Clp1PF06807.146.6e-2811
ENSORLP00020031567Clp1PF06807.146.6e-2811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00020023723-1963-ENSORLP00020015649441 (aa)--
ENSORLT00020023713-1764-ENSORLP00020031567441 (aa)--
Gene Model
Click here to download ENSORLG00020016676's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020016676's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00020016676clp19974.023ENSG00000172409CLP19974.478Homo_sapiens
ENSORLG00020016676clp110093.197ENSAPOG00000008242clp110093.197Acanthochromis_polyacanthus
ENSORLG00020016676clp19974.023ENSAMEG00000014551CLP19974.023Ailuropoda_melanoleuca
ENSORLG00020016676clp110093.651ENSACIG00000006310clp19993.651Amphilophus_citrinellus
ENSORLG00020016676clp110093.651ENSAOCG00000010681clp110093.651Amphiprion_ocellaris
ENSORLG00020016676clp110093.651ENSAPEG00000012165clp110093.651Amphiprion_percula
ENSORLG00020016676clp110093.651ENSATEG00000012374clp110093.651Anabas_testudineus
ENSORLG00020016676clp19974.253ENSACAG00000007139CLP19974.253Anolis_carolinensis
ENSORLG00020016676clp110073.016ENSANAG00000034935CLP19974.478Aotus_nancymaae
ENSORLG00020016676clp110094.331ENSACLG00000013573clp110094.331Astatotilapia_calliptera
ENSORLG00020016676clp19586.321ENSAMXG00000014194clp19886.321Astyanax_mexicanus
ENSORLG00020016676clp19874.246ENSBTAG00000006493CLP19974.246Bos_taurus
ENSORLG00020016676clp19646.963WBGene00010304clpf-19846.963Caenorhabditis_elegans
ENSORLG00020016676clp110073.016ENSCJAG00000008748CLP19974.478Callithrix_jacchus
ENSORLG00020016676clp19874.246ENSCAFG00000007815CLP19974.246Canis_familiaris
ENSORLG00020016676clp19874.246ENSCAFG00020000903CLP19974.246Canis_lupus_dingo
ENSORLG00020016676clp19974.713ENSCHIG00000023497CLP19974.713Capra_hircus
ENSORLG00020016676clp19974.253ENSTSYG00000006824CLP19974.253Carlito_syrichta
ENSORLG00020016676clp19974.253ENSCAPG00000009703CLP19974.253Cavia_aperea
ENSORLG00020016676clp19675.472ENSCPOG00000012554CLP19975.472Cavia_porcellus
ENSORLG00020016676clp19974.253ENSCCAG00000031957CLP19974.253Cebus_capucinus
ENSORLG00020016676clp110073.016ENSCATG00000044628CLP19974.478Cercocebus_atys
ENSORLG00020016676clp19874.478ENSCLAG00000004094CLP19974.478Chinchilla_lanigera
ENSORLG00020016676clp19874.478ENSCSAG00000005994CLP19974.478Chlorocebus_sabaeus
ENSORLG00020016676clp19873.843ENSCPBG00000016843CLP19973.843Chrysemys_picta_bellii
ENSORLG00020016676clp19561.575ENSCING00000003779-9661.575Ciona_intestinalis
ENSORLG00020016676clp19561.962ENSCSAVG00000003437-9661.962Ciona_savignyi
ENSORLG00020016676clp19974.023ENSCANG00000034335CLP19974.478Colobus_angolensis_palliatus
ENSORLG00020016676clp19873.843ENSCGRG00001002227CLP19973.843Cricetulus_griseus_chok1gshd
ENSORLG00020016676clp19873.843ENSCGRG00000004328CLP19973.843Cricetulus_griseus_crigri
ENSORLG00020016676clp110092.290ENSCSEG00000008614clp110092.290Cynoglossus_semilaevis
ENSORLG00020016676clp110093.651ENSCVAG00000020101clp110093.651Cyprinodon_variegatus
ENSORLG00020016676clp19985.261ENSDARG00000063663clp19985.261Danio_rerio
ENSORLG00020016676clp19873.672ENSDNOG00000042415CLP19073.672Dasypus_novemcinctus
ENSORLG00020016676clp19974.023ENSDORG00000014685Clp19974.023Dipodomys_ordii
ENSORLG00020016676clp19653.412FBgn0033842cbc9853.412Drosophila_melanogaster
ENSORLG00020016676clp19874.478ENSETEG00000003009CLP19974.478Echinops_telfairi
ENSORLG00020016676clp19863.805ENSEBUG00000011648clp19963.805Eptatretus_burgeri
ENSORLG00020016676clp19974.483ENSEASG00005002093CLP19974.483Equus_asinus_asinus
ENSORLG00020016676clp19974.483ENSECAG00000011597CLP19974.483Equus_caballus
ENSORLG00020016676clp19973.793ENSEEUG00000012771CLP19973.793Erinaceus_europaeus
ENSORLG00020016676clp110083.632ENSELUG00000024048clp110083.632Esox_lucius
ENSORLG00020016676clp19974.253ENSFCAG00000006633CLP19974.253Felis_catus
ENSORLG00020016676clp19874.537ENSFALG00000011145CLP19974.537Ficedula_albicollis
ENSORLG00020016676clp19874.478ENSFDAG00000000234CLP19974.478Fukomys_damarensis
ENSORLG00020016676clp110094.558ENSFHEG00000014760CLP110094.558Fundulus_heteroclitus
ENSORLG00020016676clp110087.075ENSGMOG00000019340clp110087.075Gadus_morhua
ENSORLG00020016676clp19874.306ENSGALG00000007370CLP19974.306Gallus_gallus
ENSORLG00020016676clp110093.878ENSGAFG00000003020clp110093.878Gambusia_affinis
ENSORLG00020016676clp110092.971ENSGACG00000017832clp110092.971Gasterosteus_aculeatus
ENSORLG00020016676clp19874.074ENSGAGG00000013279CLP19974.074Gopherus_agassizii
ENSORLG00020016676clp19974.023ENSGGOG00000023006CLP19974.478Gorilla_gorilla
ENSORLG00020016676clp110094.558ENSHBUG00000010436clp110094.558Haplochromis_burtoni
ENSORLG00020016676clp19874.478ENSHGLG00000009914CLP19974.478Heterocephalus_glaber_female
ENSORLG00020016676clp19874.478ENSHGLG00100006105CLP19974.478Heterocephalus_glaber_male
ENSORLG00020016676clp110092.063ENSHCOG00000010072clp110092.063Hippocampus_comes
ENSORLG00020016676clp110084.410ENSIPUG00000016238clp19984.410Ictalurus_punctatus
ENSORLG00020016676clp19874.246ENSSTOG00000029257CLP19974.246Ictidomys_tridecemlineatus
ENSORLG00020016676clp19874.246ENSJJAG00000023691Clp19974.246Jaculus_jaculus
ENSORLG00020016676clp110093.878ENSKMAG00000011990clp110093.878Kryptolebias_marmoratus
ENSORLG00020016676clp110093.424ENSLBEG00000010201clp110093.424Labrus_bergylta
ENSORLG00020016676clp19675.000ENSLACG00000003160CLP19875.000Latimeria_chalumnae
ENSORLG00020016676clp17184.161ENSLOCG00000008074clp110084.161Lepisosteus_oculatus
ENSORLG00020016676clp19874.246ENSLAFG00000014907CLP19974.246Loxodonta_africana
ENSORLG00020016676clp19974.023ENSMFAG00000046074CLP19974.478Macaca_fascicularis
ENSORLG00020016676clp19974.023ENSMMUG00000038007CLP19974.023Macaca_mulatta
ENSORLG00020016676clp19874.478ENSMNEG00000000259CLP19974.478Macaca_nemestrina
ENSORLG00020016676clp19974.023ENSMLEG00000043556CLP19974.478Mandrillus_leucophaeus
ENSORLG00020016676clp110093.651ENSMAMG00000002149clp110093.651Mastacembelus_armatus
ENSORLG00020016676clp110094.331ENSMZEG00005002850clp110094.331Maylandia_zebra
ENSORLG00020016676clp19874.306ENSMGAG00000009643CLP19974.306Meleagris_gallopavo
ENSORLG00020016676clp19873.380ENSMAUG00000016261Clp19973.380Mesocricetus_auratus
ENSORLG00020016676clp19973.576ENSMICG00000004895CLP19974.246Microcebus_murinus
ENSORLG00020016676clp19874.074ENSMOCG00000005498Clp19974.074Microtus_ochrogaster
ENSORLG00020016676clp110091.156ENSMMOG00000003229clp110091.156Mola_mola
ENSORLG00020016676clp19675.472ENSMODG00000020107-9974.074Monodelphis_domestica
ENSORLG00020016676clp19675.472ENSMODG00000024148-9974.074Monodelphis_domestica
ENSORLG00020016676clp110094.104ENSMALG00000014239clp110094.104Monopterus_albus
ENSORLG00020016676clp19873.843MGP_CAROLIEiJ_G0023726Clp19973.843Mus_caroli
ENSORLG00020016676clp19873.843ENSMUSG00000027079Clp19973.843Mus_musculus
ENSORLG00020016676clp19873.611MGP_PahariEiJ_G0025177Clp19973.611Mus_pahari
ENSORLG00020016676clp19873.843MGP_SPRETEiJ_G0024646Clp19973.843Mus_spretus
ENSORLG00020016676clp19874.246ENSMPUG00000000268CLP19974.246Mustela_putorius_furo
ENSORLG00020016676clp19974.713ENSMLUG00000007904CLP19974.713Myotis_lucifugus
ENSORLG00020016676clp19874.014ENSNGAG00000006165Clp19974.014Nannospalax_galili
ENSORLG00020016676clp110093.878ENSNBRG00000005225clp110093.878Neolamprologus_brichardi
ENSORLG00020016676clp18068.235ENSNLEG00000012809-9968.235Nomascus_leucogenys
ENSORLG00020016676clp19873.963ENSMEUG00000010949CLP110073.963Notamacropus_eugenii
ENSORLG00020016676clp16976.238ENSOPRG00000007329CLP110076.238Ochotona_princeps
ENSORLG00020016676clp19874.478ENSODEG00000011410CLP19974.478Octodon_degus
ENSORLG00020016676clp110094.331ENSONIG00000005089clp110094.331Oreochromis_niloticus
ENSORLG00020016676clp19974.253ENSOCUG00000007045CLP19974.253Oryctolagus_cuniculus
ENSORLG00020016676clp110099.773ENSORLG00000003647clp110099.773Oryzias_latipes
ENSORLG00020016676clp110099.773ENSORLG00015019484clp110099.773Oryzias_latipes_hsok
ENSORLG00020016676clp110097.959ENSOMEG00000021303clp110097.959Oryzias_melastigma
ENSORLG00020016676clp19974.253ENSOGAG00000004508CLP19974.253Otolemur_garnettii
ENSORLG00020016676clp19873.272ENSOARG00000010145CLP19973.272Ovis_aries
ENSORLG00020016676clp19974.023ENSPPAG00000041519CLP19974.478Pan_paniscus
ENSORLG00020016676clp19974.253ENSPPRG00000006135CLP19974.253Panthera_pardus
ENSORLG00020016676clp19974.253ENSPTIG00000015866CLP19974.253Panthera_tigris_altaica
ENSORLG00020016676clp19874.478ENSPTRG00000047318CLP19974.478Pan_troglodytes
ENSORLG00020016676clp19974.023ENSPANG00000017078CLP19874.023Papio_anubis
ENSORLG00020016676clp110083.820ENSPKIG00000007697clp110084.045Paramormyrops_kingsleyae
ENSORLG00020016676clp19370.905ENSPSIG00000005468CLP19970.905Pelodiscus_sinensis
ENSORLG00020016676clp110091.383ENSPMGG00000012171clp110091.383Periophthalmus_magnuspinnatus
ENSORLG00020016676clp19874.074ENSPEMG00000011213-9974.074Peromyscus_maniculatus_bairdii
ENSORLG00020016676clp19866.204ENSPMAG00000006707clp19966.204Petromyzon_marinus
ENSORLG00020016676clp19974.483ENSPCIG00000011899CLP19974.483Phascolarctos_cinereus
ENSORLG00020016676clp110093.878ENSPFOG00000008169clp110093.878Poecilia_formosa
ENSORLG00020016676clp110093.878ENSPLAG00000022388clp110093.878Poecilia_latipinna
ENSORLG00020016676clp110093.878ENSPMEG00000021088clp110093.878Poecilia_mexicana
ENSORLG00020016676clp110093.878ENSPREG00000017802clp110093.878Poecilia_reticulata
ENSORLG00020016676clp15272.489ENSPPYG00000003266-10072.489Pongo_abelii
ENSORLG00020016676clp19974.023ENSPCOG00000000360CLP19974.023Propithecus_coquereli
ENSORLG00020016676clp19874.246ENSPVAG00000016270CLP19974.246Pteropus_vampyrus
ENSORLG00020016676clp110094.558ENSPNYG00000017274clp19994.558Pundamilia_nyererei
ENSORLG00020016676clp110083.929ENSPNAG00000026460clp110084.375Pygocentrus_nattereri
ENSORLG00020016676clp19873.843ENSRNOG00000007416Clp19973.843Rattus_norvegicus
ENSORLG00020016676clp19874.478ENSRBIG00000018191CLP19974.478Rhinopithecus_bieti
ENSORLG00020016676clp19974.023ENSRROG00000039265CLP19974.478Rhinopithecus_roxellana
ENSORLG00020016676clp19461.836ENSSBOG00000010558-9361.836Saimiri_boliviensis_boliviensis
ENSORLG00020016676clp19874.478ENSSBOG00000032517-9974.478Saimiri_boliviensis_boliviensis
ENSORLG00020016676clp19675.708ENSSHAG00000015695CLP19974.306Sarcophilus_harrisii
ENSORLG00020016676clp110082.561ENSSFOG00015000628clp19983.747Scleropages_formosus
ENSORLG00020016676clp110094.558ENSSMAG00000019423clp19994.558Scophthalmus_maximus
ENSORLG00020016676clp110094.104ENSSDUG00000014495clp110094.104Seriola_dumerili
ENSORLG00020016676clp110093.878ENSSLDG00000000937clp110093.878Seriola_lalandi_dorsalis
ENSORLG00020016676clp15272.368ENSSARG00000002459CLP110072.368Sorex_araneus
ENSORLG00020016676clp19873.611ENSSPUG00000016811CLP19973.611Sphenodon_punctatus
ENSORLG00020016676clp110093.651ENSSPAG00000016052clp110093.651Stegastes_partitus
ENSORLG00020016676clp19874.246ENSSSCG00000031442CLP19974.246Sus_scrofa
ENSORLG00020016676clp19874.306ENSTGUG00000007002CLP19974.306Taeniopygia_guttata
ENSORLG00020016676clp110088.889ENSTRUG00000012602clp110088.889Takifugu_rubripes
ENSORLG00020016676clp110087.982ENSTNIG00000013125clp110087.982Tetraodon_nigroviridis
ENSORLG00020016676clp19873.782ENSTBEG00000009975CLP19973.782Tupaia_belangeri
ENSORLG00020016676clp19874.246ENSTTRG00000002096CLP19974.246Tursiops_truncatus
ENSORLG00020016676clp19874.246ENSUAMG00000011388CLP19974.246Ursus_americanus
ENSORLG00020016676clp19874.246ENSUMAG00000018317CLP19974.246Ursus_maritimus
ENSORLG00020016676clp110073.243ENSVVUG00000017138CLP19973.243Vulpes_vulpes
ENSORLG00020016676clp110069.977ENSXETG00000007088clp110070.880Xenopus_tropicalis
ENSORLG00020016676clp110094.104ENSXCOG00000002287clp110094.104Xiphophorus_couchianus
ENSORLG00020016676clp110094.104ENSXMAG00000009783clp110094.104Xiphophorus_maculatus

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