EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020017005 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 18032 bases
Position: chr2:19281651-19299682
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020015964	RNase_Zc3h12a	PF11977.8	1.6e-64	1	1
ENSORLP00020015978	RNase_Zc3h12a	PF11977.8	1.6e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020024131	-	6101	-	ENSORLP00020015964	910 (aa)	-	-
ENSORLT00020024159	-	6312	-	ENSORLP00020015978	910 (aa)	-	-

Gene Model

Click here to download ENSORLG00020017005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020017005's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020017005	-	99	43.396	ENSORLG00020019033	-	86	73.279

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020017005	-	80	77.045	ENSAPOG00000015355	-	82	75.830	Acanthochromis_polyacanthus
ENSORLG00020017005	-	85	48.360	ENSAPOG00000001632	-	93	67.539	Acanthochromis_polyacanthus
ENSORLG00020017005	-	100	65.488	ENSACIG00000001362	-	97	67.666	Amphilophus_citrinellus
ENSORLG00020017005	-	99	77.107	ENSAOCG00000003866	-	96	87.938	Amphiprion_ocellaris
ENSORLG00020017005	-	73	75.842	ENSAPEG00000018582	-	99	75.695	Amphiprion_percula
ENSORLG00020017005	-	100	72.833	ENSAPEG00000005727	-	93	88.000	Amphiprion_percula
ENSORLG00020017005	-	100	75.542	ENSATEG00000004134	-	100	75.413	Anabas_testudineus
ENSORLG00020017005	-	99	44.241	ENSATEG00000002260	-	83	79.399	Anabas_testudineus
ENSORLG00020017005	-	100	76.349	ENSACLG00000027924	-	100	75.415	Astatotilapia_calliptera
ENSORLG00020017005	-	64	53.160	ENSACLG00000018493	-	99	45.389	Astatotilapia_calliptera
ENSORLG00020017005	-	86	71.760	ENSCSEG00000010073	-	99	72.494	Cynoglossus_semilaevis
ENSORLG00020017005	-	99	43.182	ENSCSEG00000008542	-	99	42.594	Cynoglossus_semilaevis
ENSORLG00020017005	-	100	72.381	ENSCVAG00000002328	-	100	72.979	Cyprinodon_variegatus
ENSORLG00020017005	-	85	58.186	ENSELUG00000009319	-	95	57.035	Esox_lucius
ENSORLG00020017005	-	65	56.981	ENSELUG00000005470	-	86	52.798	Esox_lucius
ENSORLG00020017005	-	92	81.250	ENSFHEG00000021225	-	100	72.133	Fundulus_heteroclitus
ENSORLG00020017005	-	73	45.997	ENSGMOG00000017975	-	100	46.579	Gadus_morhua
ENSORLG00020017005	-	100	71.855	ENSGAFG00000005290	-	100	71.291	Gambusia_affinis
ENSORLG00020017005	-	73	68.787	ENSGACG00000014201	-	100	69.379	Gasterosteus_aculeatus
ENSORLG00020017005	-	73	45.468	ENSGACG00000001339	-	99	44.097	Gasterosteus_aculeatus
ENSORLG00020017005	-	100	75.386	ENSHBUG00000006831	-	100	75.311	Haplochromis_burtoni
ENSORLG00020017005	-	100	59.474	ENSHCOG00000008878	-	100	59.744	Hippocampus_comes
ENSORLG00020017005	-	100	75.080	ENSKMAG00000011694	-	100	74.495	Kryptolebias_marmoratus
ENSORLG00020017005	-	87	45.949	ENSLBEG00000012710	-	99	45.915	Labrus_bergylta
ENSORLG00020017005	-	97	74.538	ENSLBEG00000012554	-	99	79.119	Labrus_bergylta
ENSORLG00020017005	-	100	74.428	ENSLBEG00000003547	-	100	73.389	Labrus_bergylta
ENSORLG00020017005	-	99	45.445	ENSMAMG00000020372	-	99	45.652	Mastacembelus_armatus
ENSORLG00020017005	-	99	69.085	ENSMAMG00000021794	-	94	86.928	Mastacembelus_armatus
ENSORLG00020017005	-	100	76.349	ENSMZEG00005007718	-	100	75.415	Maylandia_zebra
ENSORLG00020017005	-	64	53.160	ENSMZEG00005019137	-	90	67.742	Maylandia_zebra
ENSORLG00020017005	-	92	74.134	ENSMMOG00000005728	-	99	77.559	Mola_mola
ENSORLG00020017005	-	99	43.443	ENSMMOG00000019526	-	93	43.107	Mola_mola
ENSORLG00020017005	-	100	73.340	ENSMALG00000010501	-	100	72.095	Monopterus_albus
ENSORLG00020017005	-	64	51.608	ENSNBRG00000012175	-	90	67.742	Neolamprologus_brichardi
ENSORLG00020017005	-	100	76.141	ENSNBRG00000006978	-	100	75.415	Neolamprologus_brichardi
ENSORLG00020017005	-	100	75.648	ENSONIG00000012268	-	100	76.366	Oreochromis_niloticus
ENSORLG00020017005	-	88	99.000	ENSORLG00000029243	-	99	99.000	Oryzias_latipes
ENSORLG00020017005	-	100	96.171	ENSORLG00015015211	-	100	95.952	Oryzias_latipes_hsok
ENSORLG00020017005	-	100	88.350	ENSOMEG00000006666	-	100	88.242	Oryzias_melastigma
ENSORLG00020017005	-	58	59.062	ENSPMGG00000020126	-	50	59.041	Periophthalmus_magnuspinnatus
ENSORLG00020017005	-	64	79.667	ENSPMGG00000009790	-	94	79.605	Periophthalmus_magnuspinnatus
ENSORLG00020017005	-	100	73.163	ENSPLAG00000009867	-	100	72.843	Poecilia_latipinna
ENSORLG00020017005	-	100	73.163	ENSPMEG00000006624	-	100	72.843	Poecilia_mexicana
ENSORLG00020017005	-	89	58.537	ENSPMEG00000011676	-	87	58.537	Poecilia_mexicana
ENSORLG00020017005	-	100	73.134	ENSPREG00000010838	-	100	72.601	Poecilia_reticulata
ENSORLG00020017005	-	84	48.346	ENSPREG00000001607	-	73	76.419	Poecilia_reticulata
ENSORLG00020017005	-	100	74.378	ENSSMAG00000007545	-	100	74.089	Scophthalmus_maximus
ENSORLG00020017005	-	88	63.889	ENSSMAG00000007258	-	87	63.889	Scophthalmus_maximus
ENSORLG00020017005	-	100	75.256	ENSSDUG00000021864	-	100	74.847	Seriola_dumerili
ENSORLG00020017005	-	85	50.060	ENSSDUG00000013237	-	89	64.000	Seriola_dumerili
ENSORLG00020017005	-	85	49.696	ENSSLDG00000004886	-	83	50.792	Seriola_lalandi_dorsalis
ENSORLG00020017005	-	100	75.256	ENSSLDG00000012268	-	100	74.949	Seriola_lalandi_dorsalis
ENSORLG00020017005	-	99	46.020	ENSSPAG00000001850	-	99	46.012	Stegastes_partitus
ENSORLG00020017005	-	100	75.951	ENSSPAG00000009485	-	100	75.540	Stegastes_partitus
ENSORLG00020017005	-	99	70.222	ENSTRUG00000022519	-	99	70.063	Takifugu_rubripes
ENSORLG00020017005	-	74	67.583	ENSTNIG00000014519	-	100	79.505	Tetraodon_nigroviridis
ENSORLG00020017005	-	99	43.936	ENSXMAG00000014715	-	83	77.922	Xiphophorus_maculatus
ENSORLG00020017005	-	100	72.708	ENSXMAG00000027171	-	100	72.495	Xiphophorus_maculatus