EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020017079 (Gene tree)
Gene ID: -
Gene Symbol: setd1ba
Alias: -
Full Name: SET domain containing 1B%2C a
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 11353 bases
Position: chr12:13058289-13069641
Accession: ZDB-GENE-050309-289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020016037	RRM_1	PF00076.22	2.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020024230	-	5280	-	ENSORLP00020016037	1759 (aa)	-	-

Gene Model

Click here to download ENSORLG00020017079's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020017079's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020017079	setd1ba	58	60.623	ENSORLG00020011897	setd1a	52	60.563

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020017079	setd1ba	51	80.878	ENSG00000139718	SETD1B	87	55.099	Homo_sapiens
ENSORLG00020017079	setd1ba	100	72.179	ENSACIG00000016453	setd1ba	100	71.989	Amphilophus_citrinellus
ENSORLG00020017079	setd1ba	97	77.390	ENSAOCG00000012148	setd1ba	99	77.222	Amphiprion_ocellaris
ENSORLG00020017079	setd1ba	100	77.949	ENSAPEG00000010762	setd1ba	99	77.343	Amphiprion_percula
ENSORLG00020017079	setd1ba	93	77.761	ENSATEG00000021563	setd1ba	100	80.282	Anabas_testudineus
ENSORLG00020017079	setd1ba	85	58.015	ENSAPLG00000005217	SETD1B	84	58.079	Anas_platyrhynchos
ENSORLG00020017079	setd1ba	55	81.157	ENSACLG00000016584	setd1ba	100	77.171	Astatotilapia_calliptera
ENSORLG00020017079	setd1ba	51	70.030	ENSCHIG00000013406	SETD1B	87	51.863	Capra_hircus
ENSORLG00020017079	setd1ba	61	68.078	ENSCPOG00000025456	SETD1A	62	65.663	Cavia_porcellus
ENSORLG00020017079	setd1ba	59	68.421	ENSCATG00000035417	SETD1A	66	58.481	Cercocebus_atys
ENSORLG00020017079	setd1ba	75	54.678	ENSCPBG00000026067	SETD1B	85	56.469	Chrysemys_picta_bellii
ENSORLG00020017079	setd1ba	55	76.581	ENSFHEG00000013126	setd1ba	55	75.692	Fundulus_heteroclitus
ENSORLG00020017079	setd1ba	52	88.050	ENSGMOG00000009831	setd1ba	59	88.050	Gadus_morhua
ENSORLG00020017079	setd1ba	68	83.601	ENSGALG00000004324	SETD1B	82	58.232	Gallus_gallus
ENSORLG00020017079	setd1ba	88	79.832	ENSGAFG00000008712	setd1ba	94	79.796	Gambusia_affinis
ENSORLG00020017079	setd1ba	89	72.117	ENSGACG00000017002	setd1ba	91	72.368	Gasterosteus_aculeatus
ENSORLG00020017079	setd1ba	68	54.386	ENSGAGG00000025013	SETD1B	85	57.100	Gopherus_agassizii
ENSORLG00020017079	setd1ba	55	81.057	ENSHBUG00000019992	setd1ba	100	77.163	Haplochromis_burtoni
ENSORLG00020017079	setd1ba	100	73.330	ENSHCOG00000001951	setd1ba	99	72.589	Hippocampus_comes
ENSORLG00020017079	setd1ba	100	72.792	ENSKMAG00000007804	setd1ba	99	72.897	Kryptolebias_marmoratus
ENSORLG00020017079	setd1ba	100	71.186	ENSLBEG00000020113	setd1ba	99	70.865	Labrus_bergylta
ENSORLG00020017079	setd1ba	91	54.188	ENSLACG00000018379	SETD1B	90	54.665	Latimeria_chalumnae
ENSORLG00020017079	setd1ba	75	63.363	ENSLOCG00000005190	setd1ba	92	61.257	Lepisosteus_oculatus
ENSORLG00020017079	setd1ba	59	61.716	ENSLAFG00000023335	SETD1A	61	60.443	Loxodonta_africana
ENSORLG00020017079	setd1ba	69	78.750	ENSLAFG00000026518	SETD1B	72	78.750	Loxodonta_africana
ENSORLG00020017079	setd1ba	59	68.421	ENSMLEG00000030176	SETD1A	65	59.091	Mandrillus_leucophaeus
ENSORLG00020017079	setd1ba	100	75.800	ENSMAMG00000011027	setd1ba	100	75.258	Mastacembelus_armatus
ENSORLG00020017079	setd1ba	55	81.157	ENSMZEG00005026617	setd1ba	100	77.171	Maylandia_zebra
ENSORLG00020017079	setd1ba	64	83.601	ENSMGAG00000004421	SETD1B	65	80.982	Meleagris_gallopavo
ENSORLG00020017079	setd1ba	100	76.062	ENSMMOG00000008190	setd1ba	99	75.910	Mola_mola
ENSORLG00020017079	setd1ba	100	76.451	ENSNBRG00000002915	setd1ba	99	76.780	Neolamprologus_brichardi
ENSORLG00020017079	setd1ba	65	81.191	ENSNLEG00000001254	SETD1B	72	79.755	Nomascus_leucogenys
ENSORLG00020017079	setd1ba	51	80.251	ENSODEG00000010155	SETD1B	86	51.417	Octodon_degus
ENSORLG00020017079	setd1ba	100	97.953	ENSORLG00000008435	setd1ba	100	97.953	Oryzias_latipes
ENSORLG00020017079	setd1ba	66	93.060	ENSORLG00015004156	setd1ba	99	93.161	Oryzias_latipes_hsok
ENSORLG00020017079	setd1ba	55	91.818	ENSOMEG00000002270	setd1ba	100	87.174	Oryzias_melastigma
ENSORLG00020017079	setd1ba	66	81.191	ENSOGAG00000034809	SETD1B	86	52.466	Otolemur_garnettii
ENSORLG00020017079	setd1ba	69	81.191	ENSPPAG00000043308	SETD1B	84	55.251	Pan_paniscus
ENSORLG00020017079	setd1ba	59	68.421	ENSPANG00000025141	SETD1A	66	58.481	Papio_anubis
ENSORLG00020017079	setd1ba	88	57.986	ENSPKIG00000023115	setd1ba	88	60.144	Paramormyrops_kingsleyae
ENSORLG00020017079	setd1ba	91	77.076	ENSPMGG00000011527	setd1ba	95	77.419	Periophthalmus_magnuspinnatus
ENSORLG00020017079	setd1ba	50	78.931	ENSPCIG00000028605	SETD1B	87	56.569	Phascolarctos_cinereus
ENSORLG00020017079	setd1ba	55	74.286	ENSPFOG00000019768	setd1ba	100	72.026	Poecilia_formosa
ENSORLG00020017079	setd1ba	55	76.855	ENSPMEG00000020446	setd1ba	100	72.406	Poecilia_mexicana
ENSORLG00020017079	setd1ba	100	72.180	ENSPREG00000011589	setd1ba	100	72.579	Poecilia_reticulata
ENSORLG00020017079	setd1ba	100	76.519	ENSPNYG00000009484	setd1ba	99	76.793	Pundamilia_nyererei
ENSORLG00020017079	setd1ba	53	73.668	ENSRNOG00000001337	Setd1b	74	56.711	Rattus_norvegicus
ENSORLG00020017079	setd1ba	51	49.555	ENSRBIG00000034516	SETD1B	51	51.354	Rhinopithecus_bieti
ENSORLG00020017079	setd1ba	100	73.396	ENSSMAG00000001244	setd1ba	99	73.757	Scophthalmus_maximus
ENSORLG00020017079	setd1ba	55	80.948	ENSSDUG00000018313	setd1ba	100	76.641	Seriola_dumerili
ENSORLG00020017079	setd1ba	55	80.948	ENSSLDG00000015543	setd1ba	99	75.785	Seriola_lalandi_dorsalis
ENSORLG00020017079	setd1ba	100	77.851	ENSSPAG00000015470	setd1ba	100	77.644	Stegastes_partitus
ENSORLG00020017079	setd1ba	69	81.447	ENSSSCG00000009806	SETD1B	88	59.247	Sus_scrofa
ENSORLG00020017079	setd1ba	99	71.493	ENSTRUG00000009533	setd1ba	100	71.156	Takifugu_rubripes
ENSORLG00020017079	setd1ba	100	73.180	ENSTNIG00000009090	setd1ba	99	73.071	Tetraodon_nigroviridis
ENSORLG00020017079	setd1ba	66	79.448	ENSUAMG00000008729	SETD1B	80	55.796	Ursus_americanus
ENSORLG00020017079	setd1ba	96	53.172	ENSXETG00000003760	setd1b	88	58.533	Xenopus_tropicalis