EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020017188 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-275j6.5
Alias: -
Full Name: si:ch211-275j6.5
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 1381 bases
Position: chr9:11578166-11579546
Accession: ZDB-GENE-130109-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020031905	RF-1	PF00472.20	8.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020024396	-	757	-	ENSORLP00020031905	168 (aa)	-	-

Gene Model

Click here to download ENSORLG00020017188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020017188's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020017188	si:ch211-275j6.5	74	59.843	ENSG00000130921	C12orf65	86	61.667	Homo_sapiens
ENSORLG00020017188	si:ch211-275j6.5	93	77.070	ENSAPOG00000000995	si:ch211-275j6.5	95	77.070	Acanthochromis_polyacanthus
ENSORLG00020017188	si:ch211-275j6.5	64	61.111	ENSAMEG00000015144	C12orf65	81	56.522	Ailuropoda_melanoleuca
ENSORLG00020017188	si:ch211-275j6.5	92	81.290	ENSACIG00000001644	si:ch211-275j6.5	97	81.290	Amphilophus_citrinellus
ENSORLG00020017188	si:ch211-275j6.5	95	77.987	ENSAOCG00000005589	si:ch211-275j6.5	99	77.987	Amphiprion_ocellaris
ENSORLG00020017188	si:ch211-275j6.5	93	77.707	ENSAPEG00000024618	si:ch211-275j6.5	95	77.707	Amphiprion_percula
ENSORLG00020017188	si:ch211-275j6.5	95	75.625	ENSATEG00000011661	si:ch211-275j6.5	85	75.625	Anabas_testudineus
ENSORLG00020017188	si:ch211-275j6.5	70	65.812	ENSAPLG00000016073	C12orf65	98	65.812	Anas_platyrhynchos
ENSORLG00020017188	si:ch211-275j6.5	82	63.768	ENSACAG00000015561	C12orf65	68	63.768	Anolis_carolinensis
ENSORLG00020017188	si:ch211-275j6.5	64	63.303	ENSANAG00000022881	C12orf65	83	58.993	Aotus_nancymaae
ENSORLG00020017188	si:ch211-275j6.5	98	77.576	ENSACLG00000023906	si:ch211-275j6.5	98	77.576	Astatotilapia_calliptera
ENSORLG00020017188	si:ch211-275j6.5	76	70.079	ENSAMXG00000031765	si:ch211-275j6.5	88	67.832	Astyanax_mexicanus
ENSORLG00020017188	si:ch211-275j6.5	87	57.718	ENSBTAG00000020503	C17H12orf65	85	57.718	Bos_taurus
ENSORLG00020017188	si:ch211-275j6.5	64	65.138	ENSCJAG00000016579	C12orf65	88	58.219	Callithrix_jacchus
ENSORLG00020017188	si:ch211-275j6.5	74	57.480	ENSCAFG00000007512	C26H12orf65	66	53.503	Canis_familiaris
ENSORLG00020017188	si:ch211-275j6.5	74	57.480	ENSCAFG00020016169	C12orf65	95	53.503	Canis_lupus_dingo
ENSORLG00020017188	si:ch211-275j6.5	82	60.432	ENSCHIG00000022229	C12orf65	77	60.432	Capra_hircus
ENSORLG00020017188	si:ch211-275j6.5	53	69.663	ENSCAPG00000014691	C12orf65	74	56.000	Cavia_aperea
ENSORLG00020017188	si:ch211-275j6.5	62	64.423	ENSCPOG00000007583	C12orf65	74	58.394	Cavia_porcellus
ENSORLG00020017188	si:ch211-275j6.5	65	63.393	ENSCATG00000040685	C12orf65	89	56.376	Cercocebus_atys
ENSORLG00020017188	si:ch211-275j6.5	67	57.143	ENSCLAG00000014329	C12orf65	74	54.745	Chinchilla_lanigera
ENSORLG00020017188	si:ch211-275j6.5	65	63.393	ENSCSAG00000002068	C12orf65	87	56.376	Chlorocebus_sabaeus
ENSORLG00020017188	si:ch211-275j6.5	95	50.303	ENSCPBG00000025970	C12orf65	95	50.303	Chrysemys_picta_bellii
ENSORLG00020017188	si:ch211-275j6.5	58	64.286	ENSCGRG00001013424	2810006K23Rik	73	57.895	Cricetulus_griseus_chok1gshd
ENSORLG00020017188	si:ch211-275j6.5	58	64.286	ENSCGRG00000003037	2810006K23Rik	73	57.895	Cricetulus_griseus_crigri
ENSORLG00020017188	si:ch211-275j6.5	98	61.905	ENSCSEG00000014536	si:ch211-275j6.5	99	61.905	Cynoglossus_semilaevis
ENSORLG00020017188	si:ch211-275j6.5	88	72.611	ENSCVAG00000023000	si:ch211-275j6.5	92	72.611	Cyprinodon_variegatus
ENSORLG00020017188	si:ch211-275j6.5	93	63.057	ENSDARG00000097803	si:ch211-275j6.5	87	73.109	Danio_rerio
ENSORLG00020017188	si:ch211-275j6.5	67	58.621	ENSDNOG00000034728	C12orf65	83	55.714	Dasypus_novemcinctus
ENSORLG00020017188	si:ch211-275j6.5	73	53.285	ENSDORG00000026069	2810006K23Rik	90	51.875	Dipodomys_ordii
ENSORLG00020017188	si:ch211-275j6.5	64	51.852	FBgn0050100	CG30100	73	51.852	Drosophila_melanogaster
ENSORLG00020017188	si:ch211-275j6.5	65	59.633	ENSETEG00000005627	C12orf65	83	55.319	Echinops_telfairi
ENSORLG00020017188	si:ch211-275j6.5	67	62.832	ENSEASG00005012587	C12orf65	77	62.500	Equus_asinus_asinus
ENSORLG00020017188	si:ch211-275j6.5	67	62.832	ENSECAG00000001057	C8H12orf65	77	62.500	Equus_caballus
ENSORLG00020017188	si:ch211-275j6.5	64	64.545	ENSEEUG00000007231	C12orf65	80	59.286	Erinaceus_europaeus
ENSORLG00020017188	si:ch211-275j6.5	96	61.491	ENSELUG00000015178	lg13h12orf65	96	61.491	Esox_lucius
ENSORLG00020017188	si:ch211-275j6.5	74	53.906	ENSFCAG00000015328	C12orf65	95	51.899	Felis_catus
ENSORLG00020017188	si:ch211-275j6.5	57	70.526	ENSFALG00000009261	C12orf65	80	61.364	Ficedula_albicollis
ENSORLG00020017188	si:ch211-275j6.5	89	77.333	ENSFHEG00000017567	si:ch211-275j6.5	89	77.333	Fundulus_heteroclitus
ENSORLG00020017188	si:ch211-275j6.5	78	74.046	ENSGMOG00000012139	si:ch211-275j6.5	89	74.046	Gadus_morhua
ENSORLG00020017188	si:ch211-275j6.5	73	62.295	ENSGALG00000029390	C15H12ORF65	74	62.295	Gallus_gallus
ENSORLG00020017188	si:ch211-275j6.5	92	77.419	ENSGACG00000008255	si:ch211-275j6.5	97	77.419	Gasterosteus_aculeatus
ENSORLG00020017188	si:ch211-275j6.5	74	55.814	ENSGAGG00000000823	C12orf65	93	53.793	Gopherus_agassizii
ENSORLG00020017188	si:ch211-275j6.5	74	59.843	ENSGGOG00000012850	C12orf65	87	57.534	Gorilla_gorilla
ENSORLG00020017188	si:ch211-275j6.5	98	77.576	ENSHBUG00000007273	si:ch211-275j6.5	98	77.576	Haplochromis_burtoni
ENSORLG00020017188	si:ch211-275j6.5	50	72.619	ENSHGLG00000010966	C12orf65	68	62.791	Heterocephalus_glaber_female
ENSORLG00020017188	si:ch211-275j6.5	50	72.619	ENSHGLG00100018631	C12orf65	68	62.791	Heterocephalus_glaber_male
ENSORLG00020017188	si:ch211-275j6.5	88	68.919	ENSHCOG00000019848	si:ch211-275j6.5	87	68.919	Hippocampus_comes
ENSORLG00020017188	si:ch211-275j6.5	82	68.841	ENSIPUG00000020793	si:ch211-275j6.5	85	68.841	Ictalurus_punctatus
ENSORLG00020017188	si:ch211-275j6.5	70	60.684	ENSSTOG00000016463	C12orf65	74	59.690	Ictidomys_tridecemlineatus
ENSORLG00020017188	si:ch211-275j6.5	82	54.745	ENSJJAG00000023360	2810006K23Rik	73	54.745	Jaculus_jaculus
ENSORLG00020017188	si:ch211-275j6.5	92	76.774	ENSKMAG00000018733	si:ch211-275j6.5	96	76.774	Kryptolebias_marmoratus
ENSORLG00020017188	si:ch211-275j6.5	71	67.500	ENSLACG00000017355	C12orf65	73	67.500	Latimeria_chalumnae
ENSORLG00020017188	si:ch211-275j6.5	71	68.067	ENSLOCG00000005702	si:ch211-275j6.5	98	68.067	Lepisosteus_oculatus
ENSORLG00020017188	si:ch211-275j6.5	71	63.333	ENSLAFG00000002134	C12orf65	72	63.333	Loxodonta_africana
ENSORLG00020017188	si:ch211-275j6.5	65	63.393	ENSMMUG00000031495	C12orf65	89	56.376	Macaca_mulatta
ENSORLG00020017188	si:ch211-275j6.5	65	63.393	ENSMNEG00000044673	C12orf65	89	57.047	Macaca_nemestrina
ENSORLG00020017188	si:ch211-275j6.5	65	63.393	ENSMLEG00000044309	C12orf65	89	56.376	Mandrillus_leucophaeus
ENSORLG00020017188	si:ch211-275j6.5	96	79.503	ENSMAMG00000017366	si:ch211-275j6.5	95	79.503	Mastacembelus_armatus
ENSORLG00020017188	si:ch211-275j6.5	98	77.576	ENSMZEG00005000938	si:ch211-275j6.5	98	77.576	Maylandia_zebra
ENSORLG00020017188	si:ch211-275j6.5	71	64.167	ENSMGAG00000003354	C12orf65	88	64.167	Meleagris_gallopavo
ENSORLG00020017188	si:ch211-275j6.5	61	61.765	ENSMAUG00000010304	2810006K23Rik	81	61.765	Mesocricetus_auratus
ENSORLG00020017188	si:ch211-275j6.5	64	62.727	ENSMICG00000037138	C12orf65	83	58.993	Microcebus_murinus
ENSORLG00020017188	si:ch211-275j6.5	59	63.366	ENSMOCG00000017477	2810006K23Rik	67	59.677	Microtus_ochrogaster
ENSORLG00020017188	si:ch211-275j6.5	98	71.341	ENSMMOG00000017134	si:ch211-275j6.5	96	71.341	Mola_mola
ENSORLG00020017188	si:ch211-275j6.5	73	57.377	ENSMODG00000012450	C12orf65	86	50.676	Monodelphis_domestica
ENSORLG00020017188	si:ch211-275j6.5	94	79.747	ENSMALG00000012291	si:ch211-275j6.5	93	79.747	Monopterus_albus
ENSORLG00020017188	si:ch211-275j6.5	65	60.550	MGP_CAROLIEiJ_G0027747	2810006K23Rik	75	56.115	Mus_caroli
ENSORLG00020017188	si:ch211-275j6.5	55	65.957	ENSMUSG00000047635	2810006K23Rik	67	59.677	Mus_musculus
ENSORLG00020017188	si:ch211-275j6.5	55	64.894	MGP_SPRETEiJ_G0028745	2810006K23Rik	67	58.871	Mus_spretus
ENSORLG00020017188	si:ch211-275j6.5	85	50.704	ENSMPUG00000001679	C12orf65	90	50.633	Mustela_putorius_furo
ENSORLG00020017188	si:ch211-275j6.5	76	54.688	ENSMLUG00000007001	C12orf65	77	54.688	Myotis_lucifugus
ENSORLG00020017188	si:ch211-275j6.5	76	58.594	ENSNGAG00000010625	2810006K23Rik	71	58.594	Nannospalax_galili
ENSORLG00020017188	si:ch211-275j6.5	98	76.829	ENSNBRG00000008082	si:ch211-275j6.5	98	76.829	Neolamprologus_brichardi
ENSORLG00020017188	si:ch211-275j6.5	74	59.055	ENSNLEG00000001470	C12orf65	87	56.849	Nomascus_leucogenys
ENSORLG00020017188	si:ch211-275j6.5	89	53.333	ENSMEUG00000009430	C12orf65	92	53.333	Notamacropus_eugenii
ENSORLG00020017188	si:ch211-275j6.5	75	57.480	ENSOPRG00000011029	C12orf65	79	57.480	Ochotona_princeps
ENSORLG00020017188	si:ch211-275j6.5	90	53.503	ENSODEG00000011382	-	87	53.503	Octodon_degus
ENSORLG00020017188	si:ch211-275j6.5	92	74.839	ENSONIG00000013298	si:ch211-275j6.5	92	74.839	Oreochromis_niloticus
ENSORLG00020017188	si:ch211-275j6.5	76	62.205	ENSOANG00000012866	C12orf65	74	61.719	Ornithorhynchus_anatinus
ENSORLG00020017188	si:ch211-275j6.5	68	58.772	ENSOCUG00000011888	C12orf65	76	58.772	Oryctolagus_cuniculus
ENSORLG00020017188	si:ch211-275j6.5	100	99.405	ENSORLG00000006153	si:ch211-275j6.5	100	99.405	Oryzias_latipes
ENSORLG00020017188	si:ch211-275j6.5	100	99.405	ENSORLG00015005780	c9h12orf65	100	99.405	Oryzias_latipes_hsok
ENSORLG00020017188	si:ch211-275j6.5	100	88.757	ENSOMEG00000001663	si:ch211-275j6.5	100	88.757	Oryzias_melastigma
ENSORLG00020017188	si:ch211-275j6.5	61	60.952	ENSOGAG00000010778	C12orf65	82	57.463	Otolemur_garnettii
ENSORLG00020017188	si:ch211-275j6.5	82	58.993	ENSOARG00000005214	C12orf65	81	58.993	Ovis_aries
ENSORLG00020017188	si:ch211-275j6.5	74	59.843	ENSPPAG00000029654	C12orf65	87	57.534	Pan_paniscus
ENSORLG00020017188	si:ch211-275j6.5	92	53.165	ENSPPRG00000024772	C12orf65	95	53.165	Panthera_pardus
ENSORLG00020017188	si:ch211-275j6.5	92	53.165	ENSPTIG00000011744	C12orf65	95	53.165	Panthera_tigris_altaica
ENSORLG00020017188	si:ch211-275j6.5	74	59.843	ENSPTRG00000005595	C12H12orf65	87	57.534	Pan_troglodytes
ENSORLG00020017188	si:ch211-275j6.5	65	63.393	ENSPANG00000015388	C12orf65	89	56.376	Papio_anubis
ENSORLG00020017188	si:ch211-275j6.5	82	64.964	ENSPKIG00000001571	si:ch211-275j6.5	82	64.964	Paramormyrops_kingsleyae
ENSORLG00020017188	si:ch211-275j6.5	95	50.595	ENSPSIG00000013010	C12orf65	88	51.220	Pelodiscus_sinensis
ENSORLG00020017188	si:ch211-275j6.5	79	76.515	ENSPMGG00000018342	si:ch211-275j6.5	78	76.515	Periophthalmus_magnuspinnatus
ENSORLG00020017188	si:ch211-275j6.5	61	57.843	ENSPMAG00000000514	si:ch211-275j6.5	92	57.843	Petromyzon_marinus
ENSORLG00020017188	si:ch211-275j6.5	66	60.360	ENSPCIG00000010996	C12orf65	64	60.360	Phascolarctos_cinereus
ENSORLG00020017188	si:ch211-275j6.5	96	73.292	ENSPLAG00000001661	si:ch211-275j6.5	95	73.292	Poecilia_latipinna
ENSORLG00020017188	si:ch211-275j6.5	96	73.913	ENSPMEG00000009201	si:ch211-275j6.5	96	73.913	Poecilia_mexicana
ENSORLG00020017188	si:ch211-275j6.5	96	73.913	ENSPMEG00000018566	si:ch211-275j6.5	96	73.913	Poecilia_mexicana
ENSORLG00020017188	si:ch211-275j6.5	96	74.534	ENSPREG00000021268	si:ch211-275j6.5	95	74.534	Poecilia_reticulata
ENSORLG00020017188	si:ch211-275j6.5	64	64.220	ENSPPYG00000005082	C12orf65	87	56.849	Pongo_abelii
ENSORLG00020017188	si:ch211-275j6.5	65	58.182	ENSPCAG00000016193	C12orf65	83	55.245	Procavia_capensis
ENSORLG00020017188	si:ch211-275j6.5	64	62.727	ENSPCOG00000021574	C12orf65	77	58.993	Propithecus_coquereli
ENSORLG00020017188	si:ch211-275j6.5	74	61.905	ENSPVAG00000015301	C12orf65	82	58.333	Pteropus_vampyrus
ENSORLG00020017188	si:ch211-275j6.5	98	77.576	ENSPNYG00000014456	si:ch211-275j6.5	98	77.576	Pundamilia_nyererei
ENSORLG00020017188	si:ch211-275j6.5	76	71.094	ENSPNAG00000019769	si:ch211-275j6.5	76	71.094	Pygocentrus_nattereri
ENSORLG00020017188	si:ch211-275j6.5	55	65.957	ENSRNOG00000001073	RGD1563482	71	59.375	Rattus_norvegicus
ENSORLG00020017188	si:ch211-275j6.5	65	62.832	ENSRBIG00000040789	C12orf65	87	56.463	Rhinopithecus_bieti
ENSORLG00020017188	si:ch211-275j6.5	65	61.947	ENSRROG00000031384	C12orf65	85	55.782	Rhinopithecus_roxellana
ENSORLG00020017188	si:ch211-275j6.5	64	65.138	ENSSBOG00000026629	C12orf65	85	59.589	Saimiri_boliviensis_boliviensis
ENSORLG00020017188	si:ch211-275j6.5	66	63.964	ENSSHAG00000014988	C12orf65	64	61.739	Sarcophilus_harrisii
ENSORLG00020017188	si:ch211-275j6.5	96	57.738	ENSSFOG00015019122	si:ch211-275j6.5	95	57.738	Scleropages_formosus
ENSORLG00020017188	si:ch211-275j6.5	91	77.778	ENSSMAG00000016770	si:ch211-275j6.5	91	77.778	Scophthalmus_maximus
ENSORLG00020017188	si:ch211-275j6.5	92	72.727	ENSSDUG00000020401	si:ch211-275j6.5	94	72.727	Seriola_dumerili
ENSORLG00020017188	si:ch211-275j6.5	98	72.561	ENSSLDG00000017638	si:ch211-275j6.5	96	72.561	Seriola_lalandi_dorsalis
ENSORLG00020017188	si:ch211-275j6.5	86	59.722	ENSSPUG00000012613	C12orf65	82	59.722	Sphenodon_punctatus
ENSORLG00020017188	si:ch211-275j6.5	98	77.439	ENSSPAG00000023476	si:ch211-275j6.5	96	77.439	Stegastes_partitus
ENSORLG00020017188	si:ch211-275j6.5	68	61.864	ENSSSCG00000009774	C12orf65	79	61.864	Sus_scrofa
ENSORLG00020017188	si:ch211-275j6.5	68	61.739	ENSTGUG00000005440	C12orf65	90	61.739	Taeniopygia_guttata
ENSORLG00020017188	si:ch211-275j6.5	94	74.051	ENSTNIG00000015832	si:ch211-275j6.5	93	74.051	Tetraodon_nigroviridis
ENSORLG00020017188	si:ch211-275j6.5	61	65.714	ENSTBEG00000012500	C12orf65	81	61.194	Tupaia_belangeri
ENSORLG00020017188	si:ch211-275j6.5	74	59.375	ENSTTRG00000015880	C12orf65	87	56.081	Tursiops_truncatus
ENSORLG00020017188	si:ch211-275j6.5	64	63.303	ENSUAMG00000019669	C12orf65	82	58.696	Ursus_americanus
ENSORLG00020017188	si:ch211-275j6.5	64	63.303	ENSUMAG00000004025	C12orf65	82	58.696	Ursus_maritimus
ENSORLG00020017188	si:ch211-275j6.5	74	57.480	ENSVVUG00000027811	C12orf65	95	53.503	Vulpes_vulpes
ENSORLG00020017188	si:ch211-275j6.5	97	74.847	ENSXCOG00000000975	si:ch211-275j6.5	95	75.776	Xiphophorus_couchianus